File Info

Filename
.command.log
Full Path
s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/3c/e875b97ab0971a1bba2097bfb9eb13/.command.log
Size
1.1 KB
Task
MUTECT2_TUMOR_ONLY (LS0898)
Attempt

Content

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  Downloading: s3://lcgp-v1/analysis/20260410_LH01147_0003_A23LTV7LT4-30e8cff3-bb76-4fb1-8024-010a94113bb0/Logs_Intermediates/DragenCaller/LS0898/LS0898_tumor.bam.bai
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa
  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/3c/e875b97ab0971a1bba2097bfb9eb13/.command.sh
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa.fai
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed
ERROR "ls s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed": no object found
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/af-only-gnomad.hg38.vcf.gz
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/af-only-gnomad.hg38.vcf.gz.tbi
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed TST500C_manifest.bed": NoSuchKey: The specified key does not exist. status code: 404, request id: 2DZGEEA9ZZZYP037, host id: ymNcKQsXAX7R66RmaeD/Ax0E8Fo/U5OOsL6PbxzR7OezjF7RjiThO12T9k4YLd/0AyhVeJy0FwI/yQjkZIuwgA==