.command.log - Workdir - MUTECT2_TUMOR_ONLY (LS0916)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/93/a2202204e4ea0406ac58744e513c88/.command.log
Size: 904 bytes
Task: MUTECT2_TUMOR_ONLY (LS0916)
Attempt

Content

  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa
  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/93/a2202204e4ea0406ac58744e513c88/.command.sh
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa.fai
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed
ERROR "ls s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed": no object found
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/af-only-gnomad.hg38.vcf.gz
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed TST500C_manifest.bed": NoSuchKey: The specified key does not exist. status code: 404, request id: XZ6DZSPVRGYWJN7G, host id: y/ERWVLbHR/ijaIPO/bxtOyiRMtT0dyQ4U9MDBPtrecDLbA/DaWuj/wmCDZn8VVWtd/TkGr4h6uJQbDDEjWTDvCvXHMqNP/T