.command.log - Workdir - MUTECT2_TUMOR_ONLY (LS0891)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/08/72d14ff205539d8cc0b16a76280ab9/.command.log
Size: 932 bytes
Task: MUTECT2_TUMOR_ONLY (LS0891)
Attempt

Content

  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa
  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/08/72d14ff205539d8cc0b16a76280ab9/.command.sh
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa.fai
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed
ERROR "ls s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed": no object found
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed TST500C_manifest.bed": NoSuchKey: The specified key does not exist. status code: 404, request id: VRT3EP76CVW2N262, host id: PEJaoL2gr9+Jk6UNcj2ztgWSwf4LFyz0vw7QIoryYGdiTKHuSiM50dsijplMtYe3YLhZNVR6Rjg=
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa hg38.fa": rename ./hg38.fa2570860500 hg38.fa: no such file or directory