.command.log - Workdir - MUTECT2_TUMOR_ONLY (LS0880)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/90/996b87b004f4923cb6f9a31662598f/.command.log
Size: 952 bytes
Task: MUTECT2_TUMOR_ONLY (LS0880)
Attempt

Content

  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa
  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/90/996b87b004f4923cb6f9a31662598f/.command.sh
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa.fai
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed
ERROR "ls s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed": no object found
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed TST500C_manifest.bed": NoSuchKey: The specified key does not exist. status code: 404, request id: VJY9JWXBADBSP02T, host id: mYYn6eoll36yC49JjxBpqNkeg35N9iq/x1Vkp6Gs4NNohtGto4kRz5I9qfLo7wd/rOnn8yaqhhyRbTA5kHjJK1n5ab6jGmhA
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa hg38.fa": rename ./hg38.fa3485689121 hg38.fa: no such file or directory