.command.log - Workdir - MUTECT2_TUMOR_ONLY (LS0912)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/3a/3bcef752f0b63352e22f63b9a47856/.command.log
Size: 884 bytes
Task: MUTECT2_TUMOR_ONLY (LS0912)
Attempt

Content

  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa
  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/3a/3bcef752f0b63352e22f63b9a47856/.command.sh
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa.fai
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed
ERROR "ls s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed": no object found
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/af-only-gnomad.hg38.vcf.gz
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed TST500C_manifest.bed": NoSuchKey: The specified key does not exist. status code: 404, request id: XZ6AHZ6S8PSSSK7K, host id: qXMgAE9SjHyVzppjnzpAgwTJcA7sEHeE6BtaZaCtBrDN7kcgmIFHsqqYlrG/2NzEGoZ43PrLDqo=