.command.log - Workdir - MUTECT2_TUMOR_ONLY (LS0912)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/bf/8d1d435f882e2b41b77c1ad22a8cbf/.command.log
Size: 932 bytes
Task: MUTECT2_TUMOR_ONLY (LS0912)
Attempt

Content

  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa
  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/bf/8d1d435f882e2b41b77c1ad22a8cbf/.command.sh
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa.fai
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed
ERROR "ls s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed": no object found
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed TST500C_manifest.bed": NoSuchKey: The specified key does not exist. status code: 404, request id: VJY60DYNT8CAWEGS, host id: mB9EOXnr9Y9NJmX4DCzYcc8ZsjV22OLXe+movE4lZZYeBmBR752qY9uv8vM7kJVtjdZEcNmASQY=
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa hg38.fa": rename ./hg38.fa1472421211 hg38.fa: no such file or directory