.command.log - Workdir - MUTECT2_TUMOR_ONLY (LS0921)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/89/d7acb29fde5a2b2f7830da95ca0dda/.command.log
Size: 932 bytes
Task: MUTECT2_TUMOR_ONLY (LS0921)
Attempt

Content

  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa
  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/89/d7acb29fde5a2b2f7830da95ca0dda/.command.sh
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa.fai
  Downloading: s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed
ERROR "ls s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed": no object found
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/TSO500/TST500C_manifest.bed/TST500C_manifest.bed TST500C_manifest.bed": NoSuchKey: The specified key does not exist. status code: 404, request id: VJY6Y36GP2F46G4H, host id: KGyjcwq8v+wZqu0l8pBNZ4YqoQgVIF8H3Rhh6oDZ9rQf3tpoXCF+ac3RgQaTjGCuDr5p2PC4vZI=
ERROR "cp s3://fsdx-algo-644019535899-us-west-2-an/references/hg38.fa hg38.fa": rename ./hg38.fa3558072920 hg38.fa: no such file or directory