File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b8/e21f6410bf61647270b44ad5f83c99/.command.log
Size
853 bytes
Task
VARIANT_COMPARISON_TSO500:BCFTOOLS_LEFTALIGN (1029_2IN)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b8/e21f6410bf61647270b44ad5f83c99/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b8/e21f6410bf61647270b44ad5f83c99/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/64e9d8410e8149ef5f3b0cf0c0d4a2/1029_2IN.grch38.lifted.vcf.gz
==> STAGING COMPLETE (5 inputs)

Writing to /tmp/bcftools.s8flgA
Lines   total/split/joined/realigned/skipped:	18262/0/0/0/0
Merging 1 temporary files
Cleaning
Done