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comparison/variant_classification.tsv
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s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/60af70de46cc9625228d129fd5312c/comparison/variant_classification.tsv
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Task
VARIANT_COMPARISON_TSO500:COMPARE_VARIANTS
Attempt

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specimen_id sample_id chrom pos ref alt variant_key variant_type region is_hotspot truth_vaf normal_af pass_in_truth fn_reason fn_vcf_filter fn_vcf_vaf fn_vcf_dp exp_vaf pass_in_exp classification
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr1 9718805 G A chr1:9718805:G:A SNV boosted_exome False 0.076 0.0 True 0.0653 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr1 11167516 T C chr1:11167516:T:C SNV boosted_exome False 0.125 0.0 True 0.0926 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr1 11199262 TGA T chr1:11199262:TGA:T INDEL boosted_exome False 0.0167 0.0 True filtered LowEVS 0.014299999922513962 3283 False FN
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr1 26774776 GC G chr1:26774776:GC:G INDEL boosted_exome False 0.0938 0.0 True 0.0877 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr1 36341830 T C chr1:36341830:T:C SNV boosted_exome False 0.1005 0.0 True 0.0739 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr1 39899907 CA C chr1:39899907:CA:C INDEL nonboosted_exome False 0.0938 0.0 True 0.0918 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr1 158681580 A C chr1:158681580:A:C SNV boosted_exome False 0.0633 0.0 True 0.0509 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr1 179108669 A C chr1:179108669:A:C SNV boosted_exome False 0.061 0.0 True 0.0603 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr1 204459920 G A chr1:204459920:G:A SNV boosted_exome False 0.0821 0.0 True 0.0737 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr1 226377127 AG A chr1:226377127:AG:A INDEL boosted_exome False 0.1386 0.0 True 0.1224 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr2 113233237 C T chr2:113233237:C:T SNV nonboosted_exome False 0.1017 0.0 True 0.093 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr2 211619209 T C chr2:211619209:T:C SNV boosted_exome False 0.0992 0.0 True 0.113 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr2 222204096 A AT chr2:222204096:A:AT INDEL nonboosted_exome False 0.2809 0.0 True 0.2555 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 10149878 C T chr3:10149878:C:T SNV boosted_exome False 0.1237 0.0 True 0.0991 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 12363687 C T chr3:12363687:C:T SNV nonboosted_exome False 0.1255 0.0 True 0.115 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 12370532 TA T chr3:12370532:TA:T INDEL nonboosted_exome False 0.1459 0.0 True 0.1422 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 12597981 T C chr3:12597981:T:C SNV nonboosted_exome False 0.1508 0.0 True 0.0991 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 47046585 GC G chr3:47046585:GC:G INDEL boosted_exome False 0.0886 0.0 True 0.0983 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 49896022 T TC chr3:49896022:T:TC INDEL boosted_exome False 0.0842 0.0 True filtered LowEVS 0.05270000174641609 3332 False FN
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 89210166 C CA chr3:89210166:C:CA INDEL boosted_exome False 0.1059 0.0 True 0.1058 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 128485955 C T chr3:128485955:C:T SNV boosted_exome False 0.0777 0.0 True 0.0589 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr4 65336115 G A chr4:65336115:G:A SNV boosted_exome False 0.1051 0.0 True 0.0882 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr4 105237492 AT A chr4:105237492:AT:A INDEL nonboosted_exome False 0.1154 0.0 True 0.1191 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr4 105272736 G A chr4:105272736:G:A SNV boosted_exome False 0.1096 0.0 True 0.0964 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr4 122826909 G A chr4:122826909:G:A SNV boosted_exome False 0.0889 0.0 True 0.0745 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr4 142086178 CT C chr4:142086178:CT:C INDEL boosted_exome False 0.0952 0.0 True 0.1179 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr4 152323032 C T chr4:152323032:C:T SNV boosted_exome False 0.0999 0.0 True 0.0946 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr4 186636762 ATT A chr4:186636762:ATT:A INDEL nonboosted_exome False 0.1174 0.0 True 0.0932 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr5 150080830 A G chr5:150080830:A:G SNV boosted_exome False 0.0778 0.0 True 0.0721 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr6 106105335 A G chr6:106105335:A:G SNV boosted_exome False 0.1053 0.0 True 0.0877 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr6 117329454 GA G chr6:117329454:GA:G INDEL nonboosted_exome False 0.1406 0.0 True 0.1303 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr6 117340159 AT A chr6:117340159:AT:A INDEL nonboosted_exome False 0.1161 0.0 True 0.1292 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr6 117340560 G T chr6:117340560:G:T SNV nonboosted_exome False 0.0303 0.0 True 0.0443 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr6 117341534 A C chr6:117341534:A:C SNV boosted_exome False 0.0458 0.0 True 0.032 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr6 135210462 TA T chr6:135210462:TA:T INDEL nonboosted_exome False 0.1381 0.0 True 0.1042 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr6 149683845 T C chr6:149683845:T:C SNV boosted_exome False 0.1322 0.0 True 0.107 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr6 151365726 G A chr6:151365726:G:A SNV boosted_exome False 0.1148 0.0 True 0.0987 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr6 157200997 G A chr6:157200997:G:A SNV boosted_exome False 0.1086 0.0 True 0.0877 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr7 13894657 A G chr7:13894657:A:G SNV nonboosted_exome False 0.1429 0.0 True 0.142 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr7 13961748 A G chr7:13961748:A:G SNV nonboosted_exome False 0.1134 0.0 True 0.135 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr7 55152944 C T chr7:55152944:C:T SNV nonboosted_exome False 0.098 0.0 True 0.106 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr7 55157706 C T chr7:55157706:C:T SNV boosted_exome False 0.1049 0.0 True 0.107 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr7 55167194 C T chr7:55167194:C:T SNV nonboosted_exome False 0.1166 0.0 True not_called False FN
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr7 55168831 GA G chr7:55168831:GA:G INDEL nonboosted_exome False 0.0888 0.0 True 0.0946 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr7 55169923 C T chr7:55169923:C:T SNV nonboosted_exome False 0.1198 0.0 True 0.091 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr7 102248905 G A chr7:102248905:G:A SNV boosted_exome False 0.0788 0.0 True 0.0627 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr7 140753336 A T chr7:140753336:A:T SNV boosted_exome True 0.1018 0.0 True 0.117 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr8 31640275 C T chr8:31640275:C:T SNV boosted_exome False 0.1461 0.0 True 0.0891 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr8 31640351 C T chr8:31640351:C:T SNV boosted_exome False 0.0627 0.0 True 0.0637 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr8 37697497 G A chr8:37697497:G:A SNV boosted_exome False 0.0864 0.0 True 0.0678 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr8 47955943 A C chr8:47955943:A:C SNV boosted_exome False 0.0902 0.0 True 0.0749 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr9 36966656 G A chr9:36966656:G:A SNV boosted_exome False 0.0877 0.0 True 0.0738 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr9 84873472 A G chr9:84873472:A:G SNV nonboosted_exome False 0.1237 0.0 True 0.0981 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr9 84876911 A C chr9:84876911:A:C SNV nonboosted_exome False 0.0993 0.0 True 0.122 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr9 95516693 C T chr9:95516693:C:T SNV nonboosted_exome False 0.1041 0.0 True 0.0656 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr9 107487629 A C chr9:107487629:A:C SNV boosted_exome False 0.0111 0.0 True not_called False FN
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr9 132897513 C T chr9:132897513:C:T SNV boosted_exome False 0.0836 0.0 True 0.116 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr10 43116321 A G chr10:43116321:A:G SNV nonboosted_exome False 0.0556 0.0 True 0.07 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr10 87933127 A T chr10:87933127:A:T SNV boosted_exome False 0.1011 0.0 True 0.138 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr10 87958012 TA T chr10:87958012:TA:T INDEL boosted_exome False 0.1162 0.0 True 0.1244 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr11 64360559 T C chr11:64360559:T:C SNV boosted_exome False 0.0929 0.0 True 0.0707 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr11 128458909 AT A chr11:128458909:AT:A INDEL nonboosted_exome False 0.0854 0.0 True 0.103 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr12 6593471 T G chr12:6593471:T:G SNV boosted_exome False 0.0217 0.0 True 0.0129 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr12 57751081 G A chr12:57751081:G:A SNV boosted_exome False 0.1157 0.0 True 0.101 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr12 111418161 C T chr12:111418161:C:T SNV boosted_exome False 0.0726 0.0 True 0.0644 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr12 111418399 C T chr12:111418399:C:T SNV boosted_exome False 0.048 0.0 True 0.0365 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr12 132661620 C T chr12:132661620:C:T SNV boosted_exome False 0.1169 0.0 True 0.0874 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr13 20988748 C CG chr13:20988748:C:CG INDEL boosted_exome False 0.0776 0.0 True filtered LowEVS 0.06379999965429306 4330 False FN
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr13 32332771 A G chr13:32332771:A:G SNV boosted_exome False 0.1888 0.0 True not_called False FN
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr13 113310840 C A chr13:113310840:C:A SNV boosted_exome False 0.0576 0.0 True 0.0461 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr14 36517479 G A chr14:36517479:G:A SNV boosted_exome False 0.0971 0.0 True 0.0715 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr14 95124312 CTCA C chr14:95124312:CTCA:C INDEL boosted_exome False 0.0814 0.0 True 0.1237 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr15 90794285 T C chr15:90794285:T:C SNV boosted_exome False 0.1295 0.0 True 0.101 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr15 90804301 A C chr15:90804301:A:C SNV boosted_exome False 0.1482 0.0 True 0.0997 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr16 346978 GA G chr16:346978:GA:G INDEL boosted_exome False 0.0717 0.0 True 0.0737 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr16 2076067 G A chr16:2076067:G:A SNV nonboosted_exome False 0.0596 0.0 True 0.0664 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr16 3596277 CG C chr16:3596277:CG:C INDEL nonboosted_exome False 0.0704 0.0 True 0.0494 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr16 9769091 T C chr16:9769091:T:C SNV nonboosted_exome False 0.0957 0.0 True 0.0798 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr16 23638074 A G chr16:23638074:A:G SNV boosted_exome False 0.1413 0.0 True 0.103 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr16 31132250 G A chr16:31132250:G:A SNV boosted_exome False 0.0742 0.0 True 0.0781 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr16 89767141 CT C chr16:89767141:CT:C INDEL boosted_exome False 0.0873 0.0 True 0.0934 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr17 7680047 A G chr17:7680047:A:G SNV nonboosted_exome False 0.0869 0.0 True 0.0924 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr17 42210428 G GT chr17:42210428:G:GT INDEL boosted_exome False 0.0816 0.0 True 0.0954 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr17 43544547 T C chr17:43544547:T:C SNV nonboosted_exome False 0.0976 0.0 True 0.106 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr17 59947287 A G chr17:59947287:A:G SNV nonboosted_exome False 0.1325 0.0 True not_called False FN
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr17 65534018 T C chr17:65534018:T:C SNV boosted_exome False 0.1 0.0 True 0.0933 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr17 65536466 GC G chr17:65536466:GC:G INDEL boosted_exome False 0.1026 0.0 True 0.0897 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr17 72121778 C CT chr17:72121778:C:CT INDEL boosted_exome False 0.0157 0.0 True filtered LowEVS 0.013199999928474426 4648 False FN
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr19 4054327 C A chr19:4054327:C:A SNV boosted_exome False 0.0778 0.0 True 0.0749 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr19 10499885 C T chr19:10499885:C:T SNV boosted_exome False 0.1054 0.0 True 0.0714 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr19 15161655 C T chr19:15161655:C:T SNV boosted_exome False 0.1014 0.0 True 0.0702 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr19 15184993 AG A chr19:15184993:AG:A INDEL boosted_exome False 0.0531 0.0 True 0.0516 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr19 15185391 TCA T chr19:15185391:TCA:T INDEL boosted_exome False 0.0908 0.0 True filtered LowEVS 0.06710000336170197 4349 False FN
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr19 41879609 C A chr19:41879609:C:A SNV boosted_exome False 0.084 0.0 True 0.0685 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr19 45420335 G T chr19:45420335:G:T SNV boosted_exome False 0.0733 0.0 True 0.0479 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr19 47221819 C T chr19:47221819:C:T SNV boosted_exome False 0.0971 0.0 True 0.0889 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr20 32799281 G A chr20:32799281:G:A SNV boosted_exome False 0.1065 0.0 True 0.0732 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr20 42791376 C T chr20:42791376:C:T SNV boosted_exome False 0.1053 0.0 True 0.11 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr22 37973968 C T chr22:37973968:C:T SNV boosted_exome False 0.0729 0.0 True 0.0549 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chrX 40073554 C T chrX:40073554:C:T SNV boosted_exome False 0.1278 0.0 True 0.0845 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chrX 40074621 TC T chrX:40074621:TC:T INDEL boosted_exome False 0.1196 0.0 True 0.0893 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chrX 47566694 GC G chrX:47566694:GC:G INDEL boosted_exome False 0.1438 0.0 True 0.0826 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chrX 71454193 A G chrX:71454193:A:G SNV boosted_exome False 0.0866 0.0 True 0.0693 True TP
1241_J22 1241_J22-T1-TDNA-1_A23NN2MLT4_1_vs_1241_J22-N1-BDNA-1_A23TY32LT4_1 chr18 22171983 G C chr18:22171983:G:C SNV boosted_exome False 0.832 0.0 True filtered germline;normal_artifact;high_normal_vaf 0.8450000286102295 2393 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 15928623 C T chr1:15928623:C:T SNV boosted_exome False 0.0691 0.0 True 0.0817 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 18747266 A G chr1:18747266:A:G SNV nonboosted_exome False 0.139 0.0 True 0.138 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 26697224 TG T chr1:26697224:TG:T INDEL boosted_exome False 0.2655 0.0 True 0.2971 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 39902508 G A chr1:39902508:G:A SNV nonboosted_exome False 0.026 0.0 True 0.0238 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 43346628 T G chr1:43346628:T:G SNV boosted_exome False 0.0727 0.0 True 0.0577 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 46258735 C T chr1:46258735:C:T SNV boosted_exome False 0.0941 0.0 True 0.0856 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 50970411 A AG chr1:50970411:A:AG INDEL boosted_exome False 0.0667 0.0 True 0.0611 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 119937435 T C chr1:119937435:T:C SNV boosted_exome False 0.1375 0.0 True 0.142 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 150577452 C A chr1:150577452:C:A SNV boosted_exome False 0.0199 0.0 True filtered normal_artifact 0.027899999171495438 4353 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 158666347 C T chr1:158666347:C:T SNV boosted_exome False 0.0581 0.0 True 0.0511 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 204427696 G T chr1:204427696:G:T SNV boosted_exome False 0.0932 0.0 True 0.0757 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 204469142 G A chr1:204469142:G:A SNV boosted_exome False 0.0541 0.0 True 0.0553 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 243499864 C T chr1:243499864:C:T SNV nonboosted_exome False 0.0559 0.0 True 0.0508 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 243502592 G T chr1:243502592:G:T SNV nonboosted_exome False 0.0736 0.0 True 0.0892 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 15942372 G A chr2:15942372:G:A SNV boosted_exome False 0.0765 0.0 True 0.0778 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 15945910 C T chr2:15945910:C:T SNV boosted_exome False 0.1443 0.0 True 0.134 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 26793253 CG C chr2:26793253:CG:C INDEL boosted_exome False 0.0407 0.0 True 0.054 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 29920222 G A chr2:29920222:G:A SNV boosted_exome False 0.0464 0.0 True 0.0455 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 29920592 A C chr2:29920592:A:C SNV boosted_exome False 0.0672 0.0 True 0.0789 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 47482907 C A chr2:47482907:C:A SNV boosted_exome False 0.0625 0.0 True 0.0912 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 47800642 C A chr2:47800642:C:A SNV boosted_exome False 0.0205 0.0 True 0.0246 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 113234938 G A chr2:113234938:G:A SNV nonboosted_exome False 0.1265 0.0 True 0.139 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 113241669 C T chr2:113241669:C:T SNV boosted_exome False 0.1534 0.0 True 0.148 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 140378249 G T chr2:140378249:G:T SNV boosted_exome False 0.0619 0.0 True 0.0531 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 140813749 G A chr2:140813749:G:A SNV boosted_exome False 0.0609 0.0 True 0.0664 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 141020088 C A chr2:141020088:C:A SNV boosted_exome False 0.1167 0.0 True 0.0686 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 203870636 G A chr2:203870636:G:A SNV boosted_exome False 0.0894 0.0 True 0.0775 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 211712094 G T chr2:211712094:G:T SNV boosted_exome False 0.0909 0.0 True 0.0952 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 222200156 A T chr2:222200156:A:T SNV nonboosted_exome False 0.1475 0.0 True 0.164 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 222202247 C T chr2:222202247:C:T SNV nonboosted_exome False 0.0415 0.0 True 0.0553 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 222206072 AT A chr2:222206072:AT:A INDEL nonboosted_exome False 0.1392 0.0 True 0.1856 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 222212105 T TA chr2:222212105:T:TA INDEL nonboosted_exome False 0.1314 0.0 True 0.1784 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 222214536 A C chr2:222214536:A:C SNV nonboosted_exome False 0.0955 0.0 True 0.0891 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 224482030 G T chr2:224482030:G:T SNV boosted_exome False 0.0351 0.0 True 0.0572 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 226796063 G A chr2:226796063:G:A SNV boosted_exome False 0.0596 0.0 True 0.0484 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 241852265 G A chr2:241852265:G:A SNV boosted_exome False 0.0598 0.0 True 0.0503 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 10067303 A G chr3:10067303:A:G SNV boosted_exome False 0.0445 0.0 True 0.0643 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 12353329 T TA chr3:12353329:T:TA INDEL nonboosted_exome False 0.062 0.0 True 0.0914 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 12370689 A G chr3:12370689:A:G SNV nonboosted_exome False 0.0615 0.0 True 0.0641 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 12392682 CA C chr3:12392682:CA:C INDEL boosted_exome False 0.087 0.0 True 0.0637 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 12612026 G T chr3:12612026:G:T SNV boosted_exome False 0.036 0.0 True 0.0423 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 47083934 A G chr3:47083934:A:G SNV boosted_exome False 0.0605 0.0 True 0.0706 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 47098041 G A chr3:47098041:G:A SNV boosted_exome False 0.0891 0.0 True 0.0848 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 47124463 C T chr3:47124463:C:T SNV boosted_exome False 0.0454 0.0 True 0.0488 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 49686477 G T chr3:49686477:G:T SNV boosted_exome False 0.0525 0.0 True 0.0762 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 49895167 C A chr3:49895167:C:A SNV nonboosted_exome False 0.0617 0.0 True 0.0814 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 52617494 A G chr3:52617494:A:G SNV boosted_exome False 0.0778 0.0 True 0.0834 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 52634789 C A chr3:52634789:C:A SNV boosted_exome False 0.0868 0.0 True 0.0929 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 89341873 TA T chr3:89341873:TA:T INDEL boosted_exome False 0.1438 0.0 True 0.1445 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 138946288 G C chr3:138946288:G:C SNV boosted_exome False 0.0568 0.0 True 0.0448 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 181712413 C CG chr3:181712413:C:CG INDEL boosted_exome False 0.0548 0.0 True 0.0585 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 186057140 C T chr3:186057140:C:T SNV boosted_exome False 0.0444 0.0 True 0.0579 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr3 196049962 G A chr3:196049962:G:A SNV nonboosted_exome False 0.0664 0.0 True 0.0556 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr4 41748425 C T chr4:41748425:C:T SNV boosted_exome False 0.139 0.0 True 0.135 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr4 54273666 C T chr4:54273666:C:T SNV boosted_exome False 0.1381 0.0 True 0.133 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr4 80286359 G A chr4:80286359:G:A SNV boosted_exome False 0.1205 0.0 True 0.153 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr4 105237548 C T chr4:105237548:C:T SNV nonboosted_exome False 0.1429 0.0 True 0.146 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr4 186620369 C A chr4:186620369:C:A SNV nonboosted_exome False 0.069 0.0 True 0.0813 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr4 186709816 A C chr4:186709816:A:C SNV boosted_exome False 0.0843 0.0 True 0.101 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 233566 C T chr5:233566:C:T SNV boosted_exome False 0.056 0.0 True 0.0532 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 56882511 C A chr5:56882511:C:A SNV boosted_exome False 0.0769 0.0 True 0.081 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 56883557 G T chr5:56883557:G:T SNV boosted_exome False 0.0456 0.0 True 0.0568 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 58454921 C T chr5:58454921:C:T SNV boosted_exome False 0.1176 0.0 True 0.147 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 80654949 G A chr5:80654949:G:A SNV boosted_exome False 0.0654 0.0 True 0.0737 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 87268850 T G chr5:87268850:T:G SNV boosted_exome False 0.0588 0.0 True 0.0526 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 138824716 G A chr5:138824716:G:A SNV boosted_exome False 0.0415 0.0 True 0.046 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 150402332 C T chr5:150402332:C:T SNV nonboosted_exome False 0.0214 0.0 True 0.0211 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 177090537 G A chr5:177090537:G:A SNV boosted_exome False 0.1411 0.0 True 0.141 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 177095651 G A chr5:177095651:G:A SNV boosted_exome False 0.127 0.0 True 0.14 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 177211148 A G chr5:177211148:A:G SNV boosted_exome False 0.0183 0.0 True 0.0286 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 177512136 C A chr5:177512136:C:A SNV boosted_exome False 0.0836 0.0 True 0.0767 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 26158466 G A chr6:26158466:G:A SNV boosted_exome False 0.1532 0.0 True 0.136 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 27871946 C T chr6:27871946:C:T SNV boosted_exome False 0.0827 0.0 True 0.0898 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 32204159 G A chr6:32204159:G:A SNV boosted_exome False 0.083 0.0 True 0.0876 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 35452751 G A chr6:35452751:G:A SNV boosted_exome False 0.0345 0.0 True 0.028 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 37171373 G A chr6:37171373:G:A SNV boosted_exome False 0.0607 0.0 True 0.0578 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 117329451 A G chr6:117329451:A:G SNV nonboosted_exome False 0.0904 0.0 True 0.0874 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 135215015 A G chr6:135215015:A:G SNV nonboosted_exome False 0.0748 0.0 True 0.0964 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 135215065 A G chr6:135215065:A:G SNV nonboosted_exome False 0.0709 0.0 True 0.0941 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 151365999 C A chr6:151365999:C:A SNV boosted_exome False 0.0675 0.0 True 0.0801 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 157148826 C T chr6:157148826:C:T SNV boosted_exome False 0.084 0.0 True 0.0818 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 157206569 C T chr6:157206569:C:T SNV boosted_exome False 0.0759 0.0 True 0.0743 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 161106697 A G chr6:161106697:A:G SNV boosted_exome False 0.0681 0.0 True 0.0873 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 2923219 GC G chr7:2923219:GC:G INDEL boosted_exome False 0.0852 0.0 True 0.079 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 2928688 CG C chr7:2928688:CG:C INDEL boosted_exome False 0.0905 0.0 True 0.0997 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 13938757 C A chr7:13938757:C:A SNV nonboosted_exome False 0.0875 0.0 True not_called False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 13941029 A G chr7:13941029:A:G SNV nonboosted_exome False 0.0776 0.0 True not_called False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 13972524 T C chr7:13972524:T:C SNV nonboosted_exome False 0.0508 0.0 True 0.0584 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 13985572 G A chr7:13985572:G:A SNV nonboosted_exome False 0.0996 0.0 True 0.0884 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 41686411 G GA chr7:41686411:G:GA INDEL nonboosted_exome False 0.156 0.0 True 0.157 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 55179648 G A chr7:55179648:G:A SNV nonboosted_exome False 0.0517 0.0 True filtered haplotype 0.05900000035762787 3545 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 81752249 T C chr7:81752249:T:C SNV boosted_exome False 0.0286 0.0 True 0.0397 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 81758762 GA G chr7:81758762:GA:G INDEL boosted_exome False 0.0471 0.0 True filtered LowEVS 0.019500000402331352 1125 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 86786688 C T chr7:86786688:C:T SNV boosted_exome False 0.0875 0.0 True 0.075 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 102200099 G A chr7:102200099:G:A SNV boosted_exome False 0.0549 0.0 True 0.0485 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 102248933 A G chr7:102248933:A:G SNV boosted_exome False 0.1256 0.0 True 0.125 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 140753336 A T chr7:140753336:A:T SNV boosted_exome True 0.1434 0.0 True 0.168 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 140792927 TA T chr7:140792927:TA:T INDEL nonboosted_exome False 0.1145 0.0 True 0.1059 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr8 32548786 C T chr8:32548786:C:T SNV boosted_exome False 0.1257 0.0 True 0.133 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr8 32728209 A C chr8:32728209:A:C SNV nonboosted_exome False 0.0314 0.0 True 0.023 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr8 32760843 C A chr8:32760843:C:A SNV nonboosted_exome False 0.1228 0.0 True 0.127 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr8 38457535 C A chr8:38457535:C:A SNV nonboosted_exome False 0.0804 0.0 True filtered normal_artifact 0.08150000125169754 4407 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr8 41977201 C A chr8:41977201:C:A SNV boosted_exome False 0.1289 0.0 True 0.132 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr8 47820854 T C chr8:47820854:T:C SNV boosted_exome False 0.0643 0.0 True 0.0775 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr8 47912555 G A chr8:47912555:G:A SNV boosted_exome False 0.0322 0.0 True 0.0383 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr8 55998491 C T chr8:55998491:C:T SNV boosted_exome False 0.1215 0.0 True 0.13 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr8 89953437 CT C chr8:89953437:CT:C INDEL boosted_exome False 0.1564 0.0 True 0.1788 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr8 91986286 G A chr8:91986286:G:A SNV boosted_exome False 0.1777 0.0 True 0.186 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 5081795 C A chr9:5081795:C:A SNV boosted_exome False 0.0603 0.0 True 0.103 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 37020771 AC A chr9:37020771:AC:A INDEL boosted_exome False 0.0546 0.0 True filtered LowEVS 0.056299999356269836 3862 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 83970192 A G chr9:83970192:A:G SNV boosted_exome False 0.0328 0.0 True 0.0333 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 84866817 T C chr9:84866817:T:C SNV nonboosted_exome False 0.0573 0.0 True 0.0553 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 84872915 T C chr9:84872915:T:C SNV nonboosted_exome False 0.0543 0.0 True 0.0556 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 95447310 AG A chr9:95447310:AG:A INDEL boosted_exome False 0.1511 0.0 True 0.1367 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 95453621 C A chr9:95453621:C:A SNV nonboosted_exome False 0.0745 0.0 True 0.0784 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 95456306 T C chr9:95456306:T:C SNV boosted_exome False 0.0554 0.0 True 0.0597 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 107488036 C T chr9:107488036:C:T SNV boosted_exome False 0.0255 0.0 True 0.0332 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 136522886 T C chr9:136522886:T:C SNV boosted_exome False 0.1186 0.0 True 0.132 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 136898759 AC A chr9:136898759:AC:A INDEL boosted_exome False 0.0456 0.0 True filtered LowEVS 0.029600000008940697 3847 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr10 8058611 G A chr10:8058611:G:A SNV boosted_exome False 0.1248 0.0 True 0.127 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr10 8073973 C A chr10:8073973:C:A SNV boosted_exome False 0.0784 0.0 True 0.08 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr10 32035937 A G chr10:32035937:A:G SNV boosted_exome False 0.0671 0.0 True 0.06 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr10 43112796 TG T chr10:43112796:TG:T INDEL nonboosted_exome False 0.0938 0.0 True 0.079 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr10 43115938 C T chr10:43115938:C:T SNV nonboosted_exome False 0.0642 0.0 True 0.0668 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr10 43126952 G A chr10:43126952:G:A SNV nonboosted_exome False 0.0625 0.0 True 0.0473 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr10 62092939 A G chr10:62092939:A:G SNV boosted_exome False 0.0818 0.0 True 0.0731 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr10 101770499 G A chr10:101770499:G:A SNV boosted_exome False 0.0593 0.0 True 0.0644 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr10 121577965 C T chr10:121577965:C:T SNV nonboosted_exome False 0.0292 0.0 True 0.0306 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr11 17719915 G T chr11:17719915:G:T SNV boosted_exome False 0.0538 0.0 True 0.0624 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr11 32435021 C T chr11:32435021:C:T SNV boosted_exome False 0.0873 0.0 True 0.0794 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr11 32435317 G A chr11:32435317:G:A SNV boosted_exome False 0.1247 0.0 True 0.134 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr11 67433400 G T chr11:67433400:G:T SNV boosted_exome False 0.022 0.0 True 0.0301 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr11 108284450 A G chr11:108284450:A:G SNV boosted_exome False 0.0391 0.0 True 0.0554 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr11 118436671 GC G chr11:118436671:GC:G INDEL boosted_exome False 0.0725 0.0 True filtered LowEVS 0.06909999996423721 3251 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr11 118506556 G A chr11:118506556:G:A SNV boosted_exome False 0.0785 0.0 True 0.0744 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr11 128460002 T C chr11:128460002:T:C SNV nonboosted_exome False 0.0212 0.0 True filtered clustered_events 0.02500000037252903 4639 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 4444165 C T chr12:4444165:C:T SNV boosted_exome False 0.121 0.0 True 0.144 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 6582894 T A chr12:6582894:T:A SNV boosted_exome False 0.0612 0.0 True 0.0536 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 11861041 A G chr12:11861041:A:G SNV nonboosted_exome False 0.1246 0.0 True 0.141 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 11862637 GTA G chr12:11862637:GTA:G INDEL nonboosted_exome False 0.1164 0.0 True 0.1393 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 11869436 A G chr12:11869436:A:G SNV boosted_exome False 0.0526 0.0 True 0.0569 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 12717955 AAG A chr12:12717955:AAG:A INDEL boosted_exome False 0.1341 0.0 True 0.1392 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 56085070 G A chr12:56085070:G:A SNV boosted_exome False 0.1461 0.0 True 0.144 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 56101930 G GC chr12:56101930:G:GC INDEL boosted_exome False 0.0722 0.0 True 0.0845 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 56103504 C T chr12:56103504:C:T SNV nonboosted_exome False 0.0313 0.0 True not_called False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 56103505 A C chr12:56103505:A:C SNV nonboosted_exome False 0.0313 0.0 True not_called False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 57091813 A AG chr12:57091813:A:AG INDEL boosted_exome False 0.0698 0.0 True 0.0601 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 57748602 TA T chr12:57748602:TA:T INDEL boosted_exome False 0.08 0.0 True 0.0921 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 69570467 A G chr12:69570467:A:G SNV boosted_exome False 0.1853 0.0 True 0.167 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 114679554 A G chr12:114679554:A:G SNV boosted_exome False 0.0716 0.0 True 0.08 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr13 28034179 C T chr13:28034179:C:T SNV boosted_exome False 0.0283 0.0 True 0.0412 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr13 28388707 C CT chr13:28388707:C:CT INDEL nonboosted_exome False 0.0561 0.0 True 0.0726 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr13 28388859 G T chr13:28388859:G:T SNV nonboosted_exome False 0.0935 0.0 True 0.0961 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr13 32380105 G T chr13:32380105:G:T SNV boosted_exome False 0.1217 0.0 True not_called False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr13 109783005 A G chr13:109783005:A:G SNV boosted_exome False 0.0444 0.0 True 0.0578 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr13 109785991 G A chr13:109785991:G:A SNV boosted_exome False 0.1396 0.0 True 0.144 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr14 36520063 CG C chr14:36520063:CG:C INDEL boosted_exome False 0.0674 0.0 True 0.0498 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr14 81091139 A G chr14:81091139:A:G SNV boosted_exome False 0.0231 0.0 True 0.0302 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr14 81143030 G T chr14:81143030:G:T SNV boosted_exome False 0.0875 0.0 True 0.085 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr14 95133337 A G chr14:95133337:A:G SNV boosted_exome False 0.043 0.0 True 0.0467 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 34355577 T G chr15:34355577:T:G SNV boosted_exome False 0.1473 0.0 True 0.137 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 34357341 T C chr15:34357341:T:C SNV boosted_exome False 0.0317 0.0 True 0.0195 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 40731120 C A chr15:40731120:C:A SNV boosted_exome False 0.1481 0.0 True 0.141 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 41710759 GA G chr15:41710759:GA:G INDEL boosted_exome False 0.0681 0.0 True 0.0767 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 41749311 C A chr15:41749311:C:A SNV boosted_exome False 0.0235 0.0 True 0.0255 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 67165333 C T chr15:67165333:C:T SNV boosted_exome False 0.0126 0.0 True 0.00986 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 87940732 C T chr15:87940732:C:T SNV boosted_exome False 0.0996 0.0 True 0.132 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 87979059 A G chr15:87979059:A:G SNV nonboosted_exome False 0.0743 0.0 True 0.0783 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 89260815 C A chr15:89260815:C:A SNV boosted_exome False 0.1174 0.0 True 0.0906 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 89316461 T C chr15:89316461:T:C SNV nonboosted_exome False 0.0235 0.0 True 0.029 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 92953470 T G chr15:92953470:T:G SNV boosted_exome False 0.0576 0.0 True 0.0738 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 98948670 C T chr15:98948670:C:T SNV boosted_exome False 0.0368 0.0 True 0.0554 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 2586720 GTCC G chr16:2586720:GTCC:G INDEL boosted_exome False 0.1881 0.0 True 0.1953 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 3583181 A G chr16:3583181:A:G SNV nonboosted_exome False 0.0787 0.0 True 0.0768 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 3728976 G A chr16:3728976:G:A SNV boosted_exome False 0.0517 0.0 True filtered haplotype 0.054099999368190765 4224 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 3729256 T TG chr16:3729256:T:TG INDEL boosted_exome False 0.0556 0.0 True filtered LowEVS 0.052299998700618744 5022 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 3780867 T G chr16:3780867:T:G SNV boosted_exome False 0.0135 0.0 True 0.0239 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 11254974 G A chr16:11254974:G:A SNV boosted_exome False 0.1002 0.0 True 0.0923 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 23635552 G T chr16:23635552:G:T SNV boosted_exome False 0.0264 0.0 True 0.0246 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 67611961 G T chr16:67611961:G:T SNV boosted_exome False 0.0368 0.0 True 0.0396 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 72796784 C T chr16:72796784:C:T SNV boosted_exome False 0.1114 0.0 True 0.143 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 72811983 G T chr16:72811983:G:T SNV boosted_exome False 0.1385 0.0 True 0.129 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 89270841 C A chr16:89270841:C:A SNV boosted_exome False 0.058 0.0 True 0.0785 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 89291083 G A chr16:89291083:G:A SNV boosted_exome False 0.1518 0.0 True 0.133 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 89791530 A G chr16:89791530:A:G SNV boosted_exome False 0.0331 0.0 True filtered haplotype 0.04859999939799309 3267 False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 89792476 G A chr16:89792476:G:A SNV boosted_exome False 0.0899 0.0 True 0.0845 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr17 16064971 G T chr17:16064971:G:T SNV boosted_exome False 0.0855 0.0 True 0.099 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr17 40398773 T C chr17:40398773:T:C SNV nonboosted_exome False 0.1231 0.0 True 0.0924 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr17 42217219 TA T chr17:42217219:TA:T INDEL boosted_exome False 0.1325 0.0 True 0.1541 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr17 42218178 G T chr17:42218178:G:T SNV boosted_exome False 0.0735 0.0 True 0.0859 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr17 43532682 T C chr17:43532682:T:C SNV boosted_exome False 0.0563 0.0 True 0.0663 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr17 48726812 A G chr17:48726812:A:G SNV boosted_exome False 0.0909 0.0 True 0.0867 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr17 58357503 G A chr17:58357503:G:A SNV boosted_exome False 0.0292 0.0 True 0.0235 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr18 44951129 A G chr18:44951129:A:G SNV boosted_exome False 0.1331 0.0 True 0.134 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr18 47869261 G T chr18:47869261:G:T SNV boosted_exome False 0.0469 0.0 True 0.0434 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr18 51065519 A G chr18:51065519:A:G SNV boosted_exome False 0.1297 0.0 True 0.164 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr18 51078406 T G chr18:51078406:T:G SNV boosted_exome False 0.2296 0.0 True 0.214 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 2222331 C T chr19:2222331:C:T SNV boosted_exome False 0.0695 0.0 True 0.0744 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 3113471 G A chr19:3113471:G:A SNV boosted_exome False 0.1203 0.0 True 0.163 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 4054611 C T chr19:4054611:C:T SNV boosted_exome False 0.0889 0.0 True 0.0854 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 5214465 A G chr19:5214465:A:G SNV boosted_exome False 0.0227 0.0 True 0.0258 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 5221095 G A chr19:5221095:G:A SNV boosted_exome False 0.0689 0.0 True 0.0738 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 7184534 G A chr19:7184534:G:A SNV boosted_exome False 0.0487 0.0 True 0.044 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 7267863 G T chr19:7267863:G:T SNV boosted_exome False 0.0854 0.0 True 0.0741 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 14518137 A G chr19:14518137:A:G SNV nonboosted_exome False 0.1238 0.0 True 0.145 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 15239997 C T chr19:15239997:C:T SNV boosted_exome False 0.1143 0.0 True 0.128 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 33302215 T C chr19:33302215:T:C SNV boosted_exome False 0.0732 0.0 True 0.0906 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 41219468 GC G chr19:41219468:GC:G INDEL boosted_exome False 0.0801 0.0 True 0.0819 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 45408897 A G chr19:45408897:A:G SNV boosted_exome False 0.0255 0.0 True 0.0247 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 50398860 C CA chr19:50398860:C:CA INDEL boosted_exome False 0.0921 0.0 True 0.0799 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 50398995 C T chr19:50398995:C:T SNV boosted_exome False 0.0265 0.0 True 0.0231 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 50413855 G A chr19:50413855:G:A SNV boosted_exome False 0.0313 0.0 True 0.041 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr20 32786521 A T chr20:32786521:A:T SNV boosted_exome False 0.1256 0.0 True 0.149 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr20 42085730 G A chr20:42085730:G:A SNV boosted_exome False 0.0745 0.0 True 0.0848 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr20 47635364 A C chr20:47635364:A:C SNV boosted_exome False 0.0206 0.0 True 0.0264 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr20 53576007 T A chr20:53576007:T:A SNV boosted_exome False 0.0406 0.0 True 0.0423 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr20 53576342 T A chr20:53576342:T:A SNV boosted_exome False 0.0166 0.0 True 0.0248 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr20 63700666 T C chr20:63700666:T:C SNV boosted_exome False 0.0957 0.0 True 0.0935 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr21 41492430 G A chr21:41492430:G:A SNV nonboosted_exome False 0.1774 0.0 True 0.169 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr21 41492551 A G chr21:41492551:A:G SNV nonboosted_exome False 0.0656 0.0 True 0.0719 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr21 41498393 G T chr21:41498393:G:T SNV nonboosted_exome False 0.092 0.0 True 0.097 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr21 41501129 G T chr21:41501129:G:T SNV nonboosted_exome False 0.0911 0.0 True 0.104 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr21 41503219 T A chr21:41503219:T:A SNV nonboosted_exome False 0.0962 0.0 True 0.0955 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr21 44235529 TG T chr21:44235529:TG:T INDEL boosted_exome False 0.073 0.0 True not_called False FN
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr22 29297895 C T chr22:29297895:C:T SNV boosted_exome False 0.0307 0.0 True 0.0259 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr22 29298856 A G chr22:29298856:A:G SNV boosted_exome False 0.08 0.0 True 0.0778 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr22 29655663 C A chr22:29655663:C:A SNV boosted_exome False 0.1189 0.0 True 0.154 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr22 41093098 G T chr22:41093098:G:T SNV boosted_exome False 0.0399 0.0 True 0.0548 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 15823114 A G chrX:15823114:A:G SNV boosted_exome False 0.1633 0.0 True 0.155 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 40072831 TG T chrX:40072831:TG:T INDEL boosted_exome False 0.3034 0.0 True 0.295 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 47181763 G A chrX:47181763:G:A SNV boosted_exome False 0.2449 0.0 True 0.282 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 53196982 G T chrX:53196982:G:T SNV boosted_exome False 0.072 0.0 True 0.0552 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 67720327 T G chrX:67720327:T:G SNV nonboosted_exome False 0.0995 0.0 True 0.113 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 77633382 A C chrX:77633382:A:C SNV boosted_exome False 0.2235 0.0 True 0.202 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 101358330 T C chrX:101358330:T:C SNV boosted_exome False 0.1385 0.0 True 0.169 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 101362596 G T chrX:101362596:G:T SNV boosted_exome False 0.1525 0.0 True 0.178 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 130014026 T C chrX:130014026:T:C SNV boosted_exome False 0.191 0.0 True 0.172 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 130028838 G A chrX:130028838:G:A SNV boosted_exome False 0.2301 0.0 True 0.29 True TP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 130056090 T G chrX:130056090:T:G SNV boosted_exome False 0.1387 0.0 True 0.165 True TP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr1 119915636 G A chr1:119915636:G:A SNV boosted_exome False 0.000837 False 0.0966 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr2 113231445 C A chr2:113231445:C:A SNV nonboosted_exome False 0.00128 False 0.00917 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr2 140902942 G A chr2:140902942:G:A SNV boosted_exome False 0.00468 False 0.00792 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr2 189877285 G A chr2:189877285:G:A SNV boosted_exome False 0.00207 False 0.116 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr2 222218580 G A chr2:222218580:G:A SNV nonboosted_exome False 0.00116 False 0.00649 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 12364050 C T chr3:12364050:C:T SNV nonboosted_exome False 0.00121 False 0.00469 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 12364374 C T chr3:12364374:C:T SNV nonboosted_exome False 0.000986 False 0.00567 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 12371609 A C chr3:12371609:A:C SNV nonboosted_exome False 0.00163 False 0.00829 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr3 49685692 TCTC T chr3:49685692:TCTC:T INDEL boosted_exome False 0.0 False 0.0683 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr4 80274987 CA C chr4:80274987:CA:C INDEL boosted_exome False 0.0 False 0.1406 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr6 117359956 TA T chr6:117359956:TA:T INDEL boosted_exome False 0.0 False 0.1272 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr6 157206564 G A chr6:157206564:G:A SNV boosted_exome False 0.000855 False 0.0664 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr7 13932694 G A chr7:13932694:G:A SNV nonboosted_exome False 0.000947 False 0.00559 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr8 91986130 C T chr8:91986130:C:T SNV boosted_exome False 0.00235 False 0.00284 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr9 132923418 A G chr9:132923418:A:G SNV boosted_exome False 0.00209 False 0.0107 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr10 87933026 T C chr10:87933026:T:C SNV boosted_exome False 0.00134 False 0.0191 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr10 121593790 G T chr10:121593790:G:T SNV boosted_exome False 0.000633 False 0.0086 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr11 2132994 C T chr11:2132994:C:T SNV boosted_exome False 0.000923 False 0.0707 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr11 22625720 C T chr11:22625720:C:T SNV boosted_exome False 0.00219 False 0.0808 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr11 108271399 G T chr11:108271399:G:T SNV boosted_exome False 0.00197 False 0.0165 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr14 102083230 T C chr14:102083230:T:C SNV boosted_exome False 0.00169 False 0.0113 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr19 15239711 C T chr19:15239711:C:T SNV boosted_exome False 0.00185 False 0.0494 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr19 45352647 C T chr19:45352647:C:T SNV boosted_exome False 0.00118 False 0.0752 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr20 56370174 G T chr20:56370174:G:T SNV boosted_exome False 0.0018 False 0.00716 True FP
1029_HN2 1029_HN2-T1-TDNA-1_A23L5NJLT4_1_vs_1029_HN2-N1-BDNA-1_235YY7LT3_1 chr21 38381098 G A chr21:38381098:G:A SNV nonboosted_exome False 0.00349 False 0.00334 True FP
1241_J22 1241_J22-T1-TDNA-1_A23NN2MLT4_1_vs_1241_J22-N1-BDNA-1_A23TY32LT4_1 chr1 36343941 C T chr1:36343941:C:T SNV boosted_exome False 0.00167 False 0.00975 True FP
1241_J22 1241_J22-T1-TDNA-1_A23NN2MLT4_1_vs_1241_J22-N1-BDNA-1_A23TY32LT4_1 chr6 162443328 C T chr6:162443328:C:T SNV boosted_exome False 0.00146 False 0.388 True FP
1241_J22 1241_J22-T1-TDNA-1_A23NN2MLT4_1_vs_1241_J22-N1-BDNA-1_A23TY32LT4_1 chr7 13896077 T C chr7:13896077:T:C SNV boosted_exome False 0.00131 False 0.394 True FP
1241_J22 1241_J22-T1-TDNA-1_A23NN2MLT4_1_vs_1241_J22-N1-BDNA-1_A23TY32LT4_1 chr17 7674887 C A chr17:7674887:C:A SNV boosted_exome False 0.000445 False 0.927 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 18747766 T C chr1:18747766:T:C SNV nonboosted_exome False 0.000981 False 0.0115 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 158674337 G A chr1:158674337:G:A SNV boosted_exome False 0.00186 False 0.138 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr1 241497956 C A chr1:241497956:C:A SNV boosted_exome False 0.00101 False 0.00742 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 25252288 AG A chr2:25252288:AG:A INDEL nonboosted_exome False 0.0 False 0.0783 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr2 219567387 C A chr2:219567387:C:A SNV nonboosted_exome False 0.00324 False 0.0137 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr4 54261132 T G chr4:54261132:T:G SNV boosted_exome False 0.00112 False 0.0229 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr4 55102444 G A chr4:55102444:G:A SNV boosted_exome False 0.00174 False 0.126 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr5 180603329 G A chr5:180603329:G:A SNV boosted_exome False 0.00172 False 0.0245 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 33319743 C T chr6:33319743:C:T SNV boosted_exome False 0.000852 False 0.0256 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 137881213 A AC chr6:137881213:A:AC INDEL boosted_exome False 0.0045 False 0.0783 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr6 156935474 T G chr6:156935474:T:G SNV boosted_exome False 0.00229 False 0.00877 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 13963571 A G chr7:13963571:A:G SNV nonboosted_exome False 0.00151 False 0.0262 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 13978728 TA T chr7:13978728:TA:T INDEL nonboosted_exome False 0.0 False 0.1041 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr7 106872567 G A chr7:106872567:G:A SNV boosted_exome False 0.00163 False 0.0275 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 95111634 G T chr9:95111634:G:T SNV boosted_exome False 0.000753 False 0.0255 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr9 130714251 C A chr9:130714251:C:A SNV nonboosted_exome False 0.0027 False 0.0234 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr11 128768126 C T chr11:128768126:C:T SNV boosted_exome False 0.00118 False 0.132 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr12 916447 C T chr12:916447:C:T SNV boosted_exome False 0.000629 False 0.139 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr13 28385011 G T chr13:28385011:G:T SNV boosted_exome False 0.00194 False 0.00812 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 89263944 A G chr15:89263944:A:G SNV boosted_exome False 0.00133 False 0.0669 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr15 90754845 G T chr15:90754845:G:T SNV boosted_exome False 0.00122 False 0.032 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 3589539 C T chr16:3589539:C:T SNV boosted_exome False 0.000718 False 0.0614 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr16 89283105 G A chr16:89283105:G:A SNV boosted_exome False 0.00111 False 0.149 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr17 16070355 G A chr17:16070355:G:A SNV boosted_exome False 0.00126 False 0.016 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr17 16073494 G T chr17:16073494:G:T SNV boosted_exome False 0.00136 False 0.013 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr17 59949857 C A chr17:59949857:C:A SNV nonboosted_exome False 0.0017 False 0.0579 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr19 11033412 C T chr19:11033412:C:T SNV boosted_exome False 0.00114 False 0.00868 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr22 28695753 G A chr22:28695753:G:A SNV boosted_exome False 0.00159 False 0.073 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chr22 41127666 G A chr22:41127666:G:A SNV boosted_exome False 0.00159 False 0.0101 True FP
869_B0C 869_B0C-T1-TDNA-1_A23FG3YLT4_1_vs_869_B0C-N1-BDNA-1_A23FG3YLT4_1 chrX 124077959 T C chrX:124077959:T:C SNV boosted_exome False 0.00887 False 0.0863 True FP
403 rows