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AI-generated troubleshooting analysis is available in the AI Analysis tab.
Resume
To resume this run, resubmit with same or fixed code. You can also change other parameters but that will affect caching behavior.
-resume c53ea526-c29c-48b5-8590-e6b10b31a3cf -name wgs-test-20260527211910
Error Report
Error executing process > 'TSO_FASTP (OP-G0032_090-BIO01-V2WGS01-T_S6_R1_001)' Caused by: Process `TSO_FASTP (OP-G0032_090-BIO01-V2WGS01-T_S6_R1_001)` terminated with an error exit status (1) Command executed: set -euo pipefail fastp -w 4 -i 'OP-G0032_090-BIO01-V2WGS01-T_S6_R1_001.top1m.fastq.gz' -I 'OP-G0032_090-BIO01-V2WGS01-T_S6_R2_001.top1m.fastq.gz' -o OP-G0032_090-BIO01-V2WGS01-T_S6_R1_001.1.fastp.fq.gz -O OP-G0032_090-BIO01-V2WGS01-T_S6_R1_001.2.fastp.fq.gz -b 141 -B 141 --html OP-G0032_090-BIO01-V2WGS01-T_S6_R1_001.fastp.html --json OP-G0032_090-BIO01-V2WGS01-T_S6_R1_001.fastp.json Command exit status: 1 Command output: (empty) Work dir: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/2a/3ba7ebca8aba56e230fe20bac41afc Container: 644019535899.dkr.ecr.us-west-2.amazonaws.com/lcgp/rmdupes:fastp-0.0.1 Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`
Workflow
- Language / Cluster
- Nextflow / fsdx-dev
- Session ID
- c53ea526-c29c-48b5-8590-e6b10b31a3cf
- Source
- /code/workflows/tso_reprocess.nf
- Work Dir
- s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work
- Submitted By
- aschultz
- Resumed
- No
Cost and Runtime
- Status
- failed
- Cost
- $0.03
- Outputs
- 132 MB
- Started
- May 27, 2026 2:20 PM
- Completed
- May 27, 2026 2:22 PM
- Duration
- 2m 32s
- Post-workflow Transfer
- 0s
- Exit Status
- 1
- Peak Tasks / CPU / Mem
- 6 / 34 / 352.0 GB