|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (IHW09133)
|
2h 11m |
13s |
2h 11m |
2s |
37.5 GB |
120% |
855.4 MB |
152.2 MB |
0 bytes |
152.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (IHW09133)
|
12m 10s |
20s |
9m 20s |
2m 30s |
11.2 MB |
131% |
22.6 GB |
156.9 KB |
22.6 GB |
160.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (IHW09133)
|
8m 4s |
2m 25s |
4m 23s |
1m 15s |
1.9 GB |
291% |
46.5 GB |
24.2 GB |
0 bytes |
893.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (IHW09133)
|
6m 30s |
53s |
3m 51s |
1m 46s |
1.9 GB |
218% |
22.9 GB |
752.2 MB |
22.6 GB |
752.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (IHW09133)
|
11s |
4s |
5s |
2s |
443.1 MB |
356% |
100.4 MB |
2.5 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (IHW09133)
|
6s |
4s |
0s |
1s |
31.2 MB |
5779% |
2.0 MB |
47.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (IHW09133)
|
8s |
4s |
2s |
1s |
109.3 MB |
1211% |
44.1 MB |
8.3 MB |
0 bytes |
8.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (IHW09133)
|
25s |
17s |
5s |
2s |
1.4 GB |
642% |
88.8 MB |
2.8 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:HLA_CONVERT_OPTITYPE (IHW09133)
|
5s |
3s |
0s |
1s |
14.5 MB |
90% |
1011.2 KB |
2.0 KB |
0 bytes |
12.0 KB |
1 |