|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:HLA_CONVERT_OPTITYPE (IHW09161)
|
10s |
8s |
0s |
1s |
13.9 MB |
98% |
1.0 MB |
2.0 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (IHW09161)
|
1h 39m |
47s |
1h 38m |
3s |
29.5 GB |
121% |
767.7 MB |
121.6 MB |
0 bytes |
121.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (IHW09161)
|
9m 30s |
13s |
7m 24s |
1m 53s |
11.3 MB |
131% |
17.2 GB |
154.9 KB |
17.2 GB |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (IHW09161)
|
5m 18s |
43s |
3m 22s |
1m 13s |
1.9 GB |
210% |
17.5 GB |
662.9 MB |
17.2 GB |
663.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (IHW09161)
|
5m 8s |
56s |
3m 12s |
59s |
1.5 GB |
322% |
35.5 GB |
18.5 GB |
0 bytes |
700.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (IHW09161)
|
25s |
10s |
12s |
3s |
490.5 MB |
209% |
100.4 MB |
2.5 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (IHW09161)
|
5s |
4s |
0s |
0s |
35.0 MB |
2765% |
1.9 MB |
45.3 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (IHW09161)
|
7s |
3s |
2s |
1s |
100.8 MB |
430% |
43.0 MB |
8.1 MB |
0 bytes |
8.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (IHW09161)
|
10s |
2s |
5s |
2s |
1.9 GB |
581% |
88.5 MB |
2.7 MB |
0 bytes |
2.4 MB |
1 |