|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (IHW09191)
|
2h 3m |
44s |
2h 2m |
3s |
34.9 GB |
126% |
831.7 MB |
119.3 MB |
0 bytes |
119.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:HLA_CONVERT_OPTITYPE (IHW09191)
|
5s |
3s |
0s |
1s |
15.0 MB |
94% |
1011.1 KB |
2.0 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (IHW09191)
|
12m 16s |
10s |
9m 43s |
2m 23s |
10.2 MB |
131% |
22.1 GB |
156.5 KB |
22.1 GB |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (IHW09191)
|
7m 46s |
2m 33s |
3m 56s |
1m 17s |
1.9 GB |
214% |
22.5 GB |
769.1 MB |
22.1 GB |
769.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (IHW09191)
|
6m 38s |
43s |
4m 13s |
1m 41s |
1.8 GB |
308% |
45.7 GB |
23.9 GB |
0 bytes |
939.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (IHW09191)
|
10s |
3s |
5s |
2s |
483.8 MB |
382% |
100.5 MB |
2.6 MB |
0 bytes |
2.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (IHW09191)
|
6s |
4s |
0s |
1s |
3.7 MB |
4979% |
2.0 MB |
48.2 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (IHW09191)
|
8s |
3s |
2s |
2s |
109.1 MB |
701% |
44.8 MB |
8.6 MB |
0 bytes |
8.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (IHW09191)
|
10s |
2s |
5s |
2s |
2.0 GB |
583% |
89.1 MB |
2.9 MB |
0 bytes |
2.6 MB |
1 |