|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (IHW09203)
|
2h 20m |
1m 5s |
2h 19m |
3s |
39.6 GB |
118% |
899.5 MB |
170.3 MB |
0 bytes |
170.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (IHW09203)
|
13m 34s |
10s |
10m 53s |
2m 31s |
10.1 MB |
129% |
23.6 GB |
157.3 KB |
23.6 GB |
160.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (IHW09203)
|
6m 41s |
53s |
4m 9s |
1m 39s |
1.9 GB |
217% |
23.9 GB |
813.1 MB |
23.6 GB |
813.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (IHW09203)
|
6m 53s |
29s |
4m 21s |
2m 2s |
1.8 GB |
309% |
48.8 GB |
25.5 GB |
0 bytes |
1008.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (IHW09203)
|
10s |
3s |
5s |
2s |
448.7 MB |
360% |
100.5 MB |
2.5 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (IHW09203)
|
16s |
15s |
0s |
0s |
35.2 MB |
9099% |
2.0 MB |
46.0 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (IHW09203)
|
8s |
4s |
2s |
1s |
109.4 MB |
1396% |
44.4 MB |
8.4 MB |
0 bytes |
8.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (IHW09203)
|
23s |
15s |
5s |
2s |
1.5 GB |
645% |
88.8 MB |
2.8 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:HLA_CONVERT_OPTITYPE (IHW09203)
|
6s |
4s |
0s |
1s |
15.1 MB |
89% |
1011.9 KB |
2.0 KB |
0 bytes |
12.0 KB |
1 |