|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (IHW09267)
|
1h 48m |
1m 3s |
1h 47m |
2s |
30.8 GB |
118% |
751.6 MB |
77.5 MB |
0 bytes |
77.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (IHW09267)
|
10m 52s |
23s |
8m 26s |
2m 3s |
11.3 MB |
131% |
19.3 GB |
154.9 KB |
19.3 GB |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (IHW09267)
|
5m 53s |
42s |
3m 36s |
1m 35s |
1.9 GB |
213% |
19.5 GB |
699.2 MB |
19.3 GB |
699.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (IHW09267)
|
5m 58s |
56s |
3m 41s |
1m 20s |
1.7 GB |
313% |
39.8 GB |
20.8 GB |
0 bytes |
811.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (IHW09267)
|
12s |
5s |
5s |
2s |
465.6 MB |
384% |
100.4 MB |
2.5 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (IHW09267)
|
7s |
5s |
0s |
1s |
35.1 MB |
4772% |
1.9 MB |
46.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (IHW09267)
|
8s |
4s |
2s |
1s |
109.7 MB |
1322% |
43.8 MB |
8.3 MB |
0 bytes |
8.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (IHW09267)
|
11s |
3s |
5s |
2s |
1.4 GB |
631% |
88.7 MB |
2.7 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:HLA_CONVERT_OPTITYPE (IHW09267)
|
5s |
4s |
0s |
0s |
14.7 MB |
113% |
1011.1 KB |
2.0 KB |
0 bytes |
12.0 KB |
1 |