|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (IHW09352)
|
1h 32m |
1m 28s |
1h 31m |
3s |
26.7 GB |
118% |
746.1 MB |
97.7 MB |
0 bytes |
97.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (IHW09352)
|
10m 28s |
22s |
7m 57s |
2m 9s |
11.2 MB |
132% |
18.6 GB |
156.0 KB |
18.6 GB |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (IHW09352)
|
3m 39s |
5s |
2m 40s |
54s |
1.9 GB |
204% |
19.2 GB |
677.9 MB |
18.6 GB |
678.1 MB |
2 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (IHW09352)
|
7m 3s |
2m 34s |
3m 31s |
57s |
1.6 GB |
310% |
38.4 GB |
20.0 GB |
0 bytes |
736.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (IHW09352)
|
22s |
9s |
11s |
2s |
412.4 MB |
214% |
100.4 MB |
2.5 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (IHW09352)
|
5s |
4s |
0s |
0s |
35.2 MB |
2646% |
1.9 MB |
47.0 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (IHW09352)
|
7s |
3s |
2s |
1s |
101.8 MB |
1103% |
43.7 MB |
8.3 MB |
0 bytes |
8.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (IHW09352)
|
11s |
3s |
5s |
2s |
1.4 GB |
627% |
88.7 MB |
2.7 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:HLA_CONVERT_OPTITYPE (IHW09352)
|
5s |
4s |
0s |
0s |
13.9 MB |
99% |
1.0 MB |
2.0 KB |
0 bytes |
12.0 KB |
1 |