|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (IHW09434)
|
1h 41m |
1m 5s |
1h 40m |
2s |
30.5 GB |
120% |
780.2 MB |
106.8 MB |
0 bytes |
106.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:HLA_CONVERT_OPTITYPE (IHW09434)
|
5s |
3s |
0s |
1s |
14.0 MB |
126% |
1.0 MB |
2.0 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (IHW09434)
|
11m 19s |
23s |
8m 50s |
2m 6s |
11.3 MB |
130% |
19.9 GB |
156.3 KB |
15.9 GB |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (IHW09434)
|
6m 10s |
55s |
3m 50s |
1m 25s |
1.9 GB |
212% |
20.2 GB |
726.5 MB |
19.9 GB |
727.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (IHW09434)
|
6m 0s |
30s |
3m 42s |
1m 47s |
1.7 GB |
309% |
41.0 GB |
21.4 GB |
0 bytes |
802.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (IHW09434)
|
11s |
4s |
5s |
2s |
471.8 MB |
356% |
100.4 MB |
2.5 MB |
0 bytes |
2.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (IHW09434)
|
6s |
4s |
0s |
1s |
21.9 MB |
4347% |
1.9 MB |
46.6 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (IHW09434)
|
10s |
6s |
2s |
1s |
109.0 MB |
618% |
43.9 MB |
8.3 MB |
0 bytes |
8.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (IHW09434)
|
11s |
3s |
5s |
2s |
1.4 GB |
634% |
88.7 MB |
2.7 MB |
0 bytes |
2.5 MB |
1 |