|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:LIFTOVER_FUSION_TSV (1166b_FG2)
|
35s |
32s |
0s |
2s |
14.1 MB |
1288% |
30.2 MB |
1.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:SNPEFF_SNPEFF (1166b_FG2)
|
30s |
3s |
24s |
2s |
3.7 GB |
249% |
181.0 MB |
630.7 KB |
0 bytes |
756.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_ALTERA_EXACT:EXACT_VCF_TO_TMB_MSI (1166b_FG2)
|
1m 0s |
58s |
- |
- |
14.2 MB |
64% |
1.1 MB |
734 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_BGZIP (1166b_FG2)
|
1m 4s |
1m 2s |
0s |
1s |
3.6 MB |
51% |
294.6 KB |
60.3 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_INPUT_EMPTY (1166b_FG2)
|
1m 33s |
1m 32s |
- |
- |
3.3 MB |
151% |
101.5 KB |
753 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_NORMALIZE (1166b_FG2)
|
1m 36s |
1m 34s |
- |
- |
3.3 MB |
112% |
1.7 MB |
8.7 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1166b_FG2)
|
1m 4s |
1m 2s |
1s |
0s |
51.8 MB |
737% |
35.5 MB |
12.7 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1166b_FG2)
|
1m 29s |
1m 27s |
1s |
0s |
72.2 MB |
734% |
35.5 MB |
12.7 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1166b_FG2)
|
1m 27s |
1m 25s |
0s |
1s |
31.3 MB |
1120% |
29.1 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1166b_FG2)
|
57s |
55s |
0s |
1s |
13.1 MB |
1416% |
29.1 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_POST_RENAME (1166b_FG2)
|
5s |
3s |
0s |
1s |
3.5 MB |
99% |
176.7 KB |
9.2 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:DEDUP_CNV_VCF (1166b_FG2)
|
6s |
4s |
- |
- |
10.6 MB |
92% |
773.4 KB |
4.9 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_LIFTOVER (1166b_FG2)
|
5s |
3s |
0s |
1s |
13.2 MB |
99% |
4.2 MB |
13.5 KB |
0 bytes |
24.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:LIFTOVER_FUSION_TSV (1166b_FG2)
|
4s |
2s |
1s |
0s |
12.8 MB |
1244% |
30.4 MB |
1.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:LIFTOVER_FUSION_TSV (1166b_FG2)
|
5s |
3s |
1s |
0s |
46.8 MB |
865% |
30.4 MB |
1.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:LIFTOVER_FUSION_TSV (1166b_FG2)
|
4s |
3s |
0s |
0s |
13.3 MB |
1924% |
30.2 MB |
1.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_RENAME_CHRS (1166b_FG2)
|
6s |
4s |
0s |
1s |
33.7 MB |
7769% |
213.4 KB |
58.0 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:PRESERVE_ORIGINAL_COORDS (1166b_FG2)
|
4s |
2s |
- |
- |
3.3 MB |
3523% |
127.4 KB |
8.1 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:PICARD_LIFTOVERVCF (1166b_FG2)
|
1m 6s |
45s |
10s |
10s |
3.2 GB |
144% |
3.0 GB |
785.6 KB |
0 bytes |
912.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:TABIX_POST_BGZIP (1166b_FG2)
|
5s |
4s |
0s |
0s |
3.8 MB |
116% |
139.7 KB |
2.2 KB |
0 bytes |
8.0 KB |
1 |