|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CREATE_EMPTY_CNV_OUTPUTS (1166b_JE4)
|
5s |
4s |
- |
- |
3.2 MB |
25% |
139.4 KB |
4.9 KB |
0 bytes |
24.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_ALTERA_EXACT:EXACT_VCF_TO_TMB_MSI (1166b_JE4)
|
1m 10s |
1m 8s |
- |
- |
13.3 MB |
97% |
1.1 MB |
725 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_BGZIP (1166b_JE4)
|
1m 4s |
1m 3s |
0s |
0s |
3.6 MB |
68% |
262.5 KB |
49.3 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_NORMALIZE (1166b_JE4)
|
54s |
53s |
- |
- |
12.9 MB |
80% |
1.7 MB |
4.1 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_INPUT_EMPTY (1166b_JE4)
|
43s |
42s |
- |
- |
3.3 MB |
25% |
97.8 KB |
757 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1166b_JE4)
|
19s |
16s |
1s |
1s |
61.6 MB |
463% |
35.5 MB |
13.2 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1166b_JE4)
|
19s |
16s |
1s |
1s |
13.4 MB |
546% |
29.0 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:LIFTOVER_FUSION_TSV (1166b_JE4)
|
48s |
45s |
1s |
1s |
55.0 MB |
967% |
30.4 MB |
2.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:LIFTOVER_FUSION_TSV (1166b_JE4)
|
30s |
28s |
0s |
1s |
12.8 MB |
1550% |
30.2 MB |
1.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_LIFTOVER (1166b_JE4)
|
6s |
4s |
0s |
1s |
13.2 MB |
98% |
4.2 MB |
7.2 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_POST_RENAME (1166b_JE4)
|
5s |
4s |
0s |
0s |
3.5 MB |
132% |
184.2 KB |
7.7 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_RENAME_CHRS (1166b_JE4)
|
5s |
3s |
0s |
1s |
31.6 MB |
7074% |
200.9 KB |
46.2 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:PICARD_LIFTOVERVCF (1166b_JE4)
|
1m 4s |
43s |
10s |
10s |
3.1 GB |
143% |
3.0 GB |
772.9 KB |
0 bytes |
872.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_NORM_POSTLIFT (1166b_JE4)
|
19s |
3s |
7s |
8s |
33.5 MB |
220% |
3.0 GB |
220.9 KB |
0 bytes |
228.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_SORT (1166b_JE4)
|
4s |
3s |
0s |
0s |
34.2 MB |
4291% |
255.4 KB |
107.0 KB |
0 bytes |
112.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_FINAL (1166b_JE4)
|
6s |
4s |
0s |
1s |
3.6 MB |
122% |
182.6 KB |
7.8 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1166b_JE4)
|
5s |
3s |
0s |
1s |
14.1 MB |
102% |
3.6 MB |
249.3 KB |
0 bytes |
260.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SUMMARY:HARMONIZE_SUMMARY_ALTERA_EXACT:ALTERA_EXACT_CREATE_SUMMARY (1166b_JE4)
|
4s |
2s |
1s |
1s |
15.1 MB |
106% |
2.4 MB |
4.5 KB |
0 bytes |
8.0 KB |
1 |