File Info
- Filename
- 1173_MHK.cnv.hmnz.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/01_altera_exact_survey_feb26/Harmonize_dspe1173__b003992--20260226-165137/1173_MHK/variants/cnv/1173_MHK.cnv.hmnz.tsv
- Size
- 837 bytes
- Workflow Run
- Harmonize_dspe1173
- Published
- Feb 26, 2026 9:00 AM
Content
View in new tab| sample | gene | amp_del | log2_ratio | chrom | gene_start | gene_end | consequence |
| 1173_MHK | GET4 | AMP | 1.17522 | chr7 | 876551 | 896434 | DUP |
| 1173_MHK | UNCX | AMP | 1.40248 | chr7 | 1232906 | 1237318 | DUP |
| 1173_MHK | MICALL2 | AMP | 1.18137 | chr7 | 1434365 | 1459502 | DUP |
| 1173_MHK | INTS1 | AMP | 1.17472 | chr7 | 1470276 | 1504367 | DUP |
| 1173_MHK | TMEM184A | AMP | 1.16608 | chr7 | 1542234 | 1556430 | DUP |
| 1173_MHK | ELFN1 | AMP | 1.27032 | chr7 | 1688118 | 1747954 | DUP |
| 1173_MHK | CTAGE1 | AMP | 1.71205 | chr18 | 22413609 | 22417915 | DUP |
| 1173_MHK | TCEB3C | DEL | -1.4185 | chr18 | 47028201 | 47030078 | DEL |
| 1173_MHK | MAPK4 | DEL | -1.41876 | chr18 | 50560077 | 50731824 | DEL |
| 1173_MHK | ME2 | DEL | -1.36375 | chr18 | 50879048 | 50948321 | DEL |
| 1173_MHK | RP11-729L2.2 | DEL | -1.44763 | chr18 | 50968018 | 51058144 | DEL |
| 1173_MHK | SMAD4 | DEL | -1.46092 | chr18 | 51030212 | 51085039 | DEL |
| 1173_MHK | MBD2 | DEL | -1.37417 | chr18 | 54152708 | 54224788 | DEL |
| 1173_MHK | C18orf54 | DEL | -1.47914 | chr18 | 54358584 | 54382032 | DEL |
15 rows