File Info
- Filename
- 1173_JNY.cnv.hmnz.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/01_altera_exact_survey_feb26/Harmonize_dspe1173__b003992--20260226-165137/1173_JNY/variants/cnv/1173_JNY.cnv.hmnz.tsv
- Size
- 2.1 KB
- Workflow Run
- Harmonize_dspe1173
- Published
- Feb 26, 2026 9:00 AM
Content
View in new tab| sample | gene | amp_del | log2_ratio | chrom | gene_start | gene_end | consequence |
| 1173_JNY | SP4 | AMP | 1.07343 | chr7 | 21428033 | 21514822 | DUP |
| 1173_JNY | GRIP1 | AMP | 2.28982 | chr12 | 66347430 | 66678973 | DUP |
| 1173_JNY | CAND1 | AMP | 2.64481 | chr12 | 67269280 | 67319951 | DUP |
| 1173_JNY | DYRK2 | AMP | 2.52391 | chr12 | 67648720 | 67665406 | DUP |
| 1173_JNY | NUP107 | AMP | 2.80821 | chr12 | 68686733 | 68743005 | DUP |
| 1173_JNY | MDM2 | AMP | 2.77022 | chr12 | 68808175 | 68845434 | DUP |
| 1173_JNY | CPM | AMP | 2.72297 | chr12 | 68851174 | 68933199 | DUP |
| 1173_JNY | CPSF6 | AMP | 3.00987 | chr12 | 69239536 | 69274358 | DUP |
| 1173_JNY | FRS2 | AMP | 2.87655 | chr12 | 69470348 | 69579779 | DUP |
| 1173_JNY | CCT2 | AMP | 3.1594 | chr12 | 69585333 | 69601570 | DUP |
| 1173_JNY | BEST3 | AMP | 2.61834 | chr12 | 69653608 | 69699416 | DUP |
| 1173_JNY | RAB3IP | AMP | 2.52543 | chr12 | 69739389 | 69823204 | DUP |
| 1173_JNY | TK2 | AMP | 1.61972 | chr16 | 66509378 | 66550412 | DUP |
| 1173_JNY | CKLF-CMTM1 | AMP | 1.55031 | chr16 | 66552612 | 66579135 | DUP |
| 1173_JNY | CMTM1 | AMP | 1.43475 | chr16 | 66566446 | 66579137 | DUP |
| 1173_JNY | CMTM2 | AMP | 1.4392 | chr16 | 66579456 | 66588275 | DUP |
| 1173_JNY | CMTM4 | AMP | 1.50601 | chr16 | 66614749 | 66696707 | DUP |
| 1173_JNY | DYNC1LI2 | AMP | 1.529 | chr16 | 66720892 | 66751798 | DUP |
| 1173_JNY | CCDC79 | AMP | 1.33291 | chr16 | 66754975 | 66801620 | DUP |
| 1173_JNY | FAM96B | AMP | 1.54491 | chr16 | 66932055 | 66934400 | DUP |
| 1173_JNY | CES2 | AMP | 1.38356 | chr16 | 66934459 | 66945096 | DUP |
| 1173_JNY | CBFB | AMP | 1.53776 | chr16 | 67029244 | 67101022 | DUP |
| 1173_JNY | B3GNT9 | AMP | 1.40761 | chr16 | 67148104 | 67151214 | DUP |
| 1173_JNY | TRADD | AMP | 1.43998 | chr16 | 67154179 | 67160298 | DUP |
| 1173_JNY | FBXL8 | AMP | 1.49476 | chr16 | 67159930 | 67164176 | DUP |
| 1173_JNY | HSF4 | AMP | 1.3953 | chr16 | 67163384 | 67169945 | DUP |
| 1173_JNY | NOL3 | AMP | 1.33501 | chr16 | 67174001 | 67175735 | DUP |
| 1173_JNY | EXOC3L1 | AMP | 1.40756 | chr16 | 67184365 | 67190204 | DUP |
| 1173_JNY | FHOD1 | AMP | 1.43355 | chr16 | 67229388 | 67247658 | DUP |
| 1173_JNY | SLC9A5 | AMP | 1.34291 | chr16 | 67248949 | 67272190 | DUP |
| 1173_JNY | ATP6V0D1 | AMP | 1.39603 | chr16 | 67438018 | 67481237 | DUP |
| 1173_JNY | ACD | AMP | 1.39572 | chr16 | 67657531 | 67660743 | DUP |
| 1173_JNY | PARD6A | AMP | 1.60351 | chr16 | 67660958 | 67662774 | DUP |
| 1173_JNY | ENKD1 | AMP | 1.3956 | chr16 | 67662944 | 67666764 | DUP |
| 1173_JNY | C16orf86 | AMP | 1.42739 | chr16 | 67666815 | 67668758 | DUP |
| 1173_JNY | CENPT | AMP | 1.34587 | chr16 | 67828156 | 67847458 | DUP |
| 1173_JNY | PSMB10 | AMP | 1.69637 | chr16 | 67934501 | 67937087 | DUP |
| 1173_JNY | DDX28 | AMP | 1.34546 | chr16 | 68021275 | 68023867 | DUP |
39 rows