|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_POSTLIFT_EMPTY (1173_CH0)
|
4s |
3s |
- |
- |
3.3 MB |
74% |
121.8 KB |
10.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_SORT (1173_CH0)
|
4s |
3s |
0s |
0s |
30.8 MB |
7352% |
179.1 KB |
30.2 KB |
0 bytes |
36.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_POSTLIFT (1173_CH0)
|
4s |
3s |
0s |
0s |
30.0 MB |
3757% |
154.1 KB |
5.1 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_FINAL (1173_CH0)
|
5s |
3s |
0s |
1s |
3.6 MB |
102% |
165.1 KB |
2.6 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1173_CH0)
|
19s |
17s |
0s |
1s |
14.4 MB |
108% |
3.5 MB |
248.5 KB |
0 bytes |
260.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP (1173_CH0)
|
28s |
4s |
10s |
13s |
372.1 MB |
102% |
3.1 GB |
1.8 MB |
0 bytes |
236.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:SNPEFF_SNPEFF (1173_CH0)
|
35s |
4s |
22s |
8s |
4.3 GB |
262% |
155.9 MB |
1.3 MB |
0 bytes |
1.5 MB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_FINAL (1173_CH0)
|
5s |
3s |
0s |
1s |
31.0 MB |
5730% |
1.2 MB |
173.1 KB |
0 bytes |
180.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:TABIX_FINAL (1173_CH0)
|
8s |
7s |
0s |
0s |
3.6 MB |
107% |
220.0 KB |
2.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CNV_TO_TSV_HARMONIZED (1173_CH0)
|
4s |
3s |
- |
- |
13.0 MB |
120% |
1.5 MB |
2.8 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1173_CH0)
|
4s |
2s |
0s |
1s |
13.4 MB |
1471% |
35.6 MB |
12.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_BGZIP (1173_CH0)
|
6s |
5s |
0s |
0s |
3.6 MB |
103% |
134.3 KB |
12.1 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_RENAME_CHRS (1173_CH0)
|
7s |
5s |
0s |
1s |
3.7 MB |
3193% |
115.7 KB |
2.6 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_ALTERA_EXACT:EXACT_VCF_TO_TMB_MSI (1173_CH0)
|
3s |
2s |
- |
- |
12.5 MB |
102% |
1.1 MB |
730 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_INPUT_EMPTY (1173_CH0)
|
4s |
3s |
- |
- |
3.2 MB |
179% |
104.1 KB |
760 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1173_CH0)
|
5s |
3s |
0s |
1s |
13.4 MB |
1468% |
35.6 MB |
12.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_NORMALIZE (1173_CH0)
|
5s |
4s |
- |
- |
13.2 MB |
110% |
1.7 MB |
5.1 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1173_CH0)
|
5s |
3s |
0s |
1s |
14.1 MB |
1425% |
29.0 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1173_CH0)
|
5s |
3s |
0s |
1s |
13.2 MB |
1892% |
29.1 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:DEDUP_CNV_VCF (1173_CH0)
|
6s |
4s |
- |
- |
10.7 MB |
116% |
776.1 KB |
6.5 KB |
0 bytes |
16.0 KB |
1 |