|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_NORM_POSTLIFT (1173_G2E)
|
21s |
5s |
7s |
8s |
25.4 MB |
185% |
3.0 GB |
195.1 KB |
0 bytes |
204.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_POSTLIFT_EMPTY (1173_G2E)
|
5s |
4s |
- |
- |
3.3 MB |
87% |
114.3 KB |
8.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_SORT (1173_G2E)
|
5s |
4s |
0s |
0s |
33.7 MB |
3602% |
202.7 KB |
53.7 KB |
0 bytes |
60.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_POSTLIFT (1173_G2E)
|
5s |
3s |
0s |
1s |
29.4 MB |
7150% |
153.0 KB |
4.1 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_FINAL (1173_G2E)
|
6s |
5s |
0s |
0s |
3.6 MB |
143% |
157.2 KB |
6.1 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1173_G2E)
|
7s |
6s |
0s |
0s |
12.5 MB |
103% |
3.6 MB |
249.3 KB |
0 bytes |
260.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP (1173_G2E)
|
41s |
9s |
9s |
22s |
419.4 MB |
101% |
3.1 GB |
983.0 KB |
0 bytes |
216.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:SNPEFF_SNPEFF (1173_G2E)
|
42s |
18s |
21s |
2s |
3.2 GB |
251% |
153.9 MB |
856.6 KB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_FINAL (1173_G2E)
|
6s |
4s |
0s |
1s |
3.5 MB |
3362% |
684.9 KB |
88.3 KB |
0 bytes |
96.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CNV_TO_TSV_HARMONIZED (1173_G2E)
|
4s |
2s |
- |
- |
13.1 MB |
66% |
1.5 MB |
2.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:TABIX_FINAL (1173_G2E)
|
5s |
4s |
0s |
0s |
3.6 MB |
161% |
180.3 KB |
2.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_RENAME_CHRS (1173_G2E)
|
5s |
4s |
0s |
0s |
33.5 MB |
8070% |
174.5 KB |
21.3 KB |
0 bytes |
28.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_RENAME_CHRS (1173_G2E)
|
6s |
4s |
0s |
1s |
30.7 MB |
6235% |
149.4 KB |
2.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_ALTERA_EXACT:EXACT_VCF_TO_TMB_MSI (1173_G2E)
|
30s |
29s |
- |
- |
12.6 MB |
77% |
1.1 MB |
730 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_BGZIP (1173_G2E)
|
59s |
57s |
0s |
1s |
3.7 MB |
109% |
210.3 KB |
23.8 KB |
0 bytes |
28.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_NORMALIZE (1173_G2E)
|
20s |
19s |
- |
- |
13.1 MB |
105% |
1.7 MB |
5.8 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_INPUT_EMPTY (1173_G2E)
|
16s |
15s |
- |
- |
3.2 MB |
71% |
102.8 KB |
760 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_LIFTOVER (1173_G2E)
|
19s |
17s |
0s |
1s |
14.9 MB |
103% |
4.2 MB |
9.5 KB |
0 bytes |
24.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:DEDUP_CNV_VCF (1173_G2E)
|
24s |
21s |
- |
- |
11.1 MB |
83% |
774.8 KB |
5.1 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_POST_RENAME (1173_G2E)
|
19s |
17s |
0s |
1s |
3.7 MB |
157% |
140.7 KB |
6.0 KB |
0 bytes |
12.0 KB |
1 |