|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_NORM_POSTLIFT (1173_J3R)
|
20s |
4s |
7s |
8s |
33.5 MB |
235% |
3.0 GB |
190.6 KB |
0 bytes |
200.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_POSTLIFT_EMPTY (1173_J3R)
|
11s |
10s |
- |
- |
3.3 MB |
119% |
109.4 KB |
5.6 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_SORT (1173_J3R)
|
6s |
4s |
0s |
1s |
27.3 MB |
6626% |
193.3 KB |
44.3 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_POSTLIFT (1173_J3R)
|
6s |
4s |
0s |
1s |
3.7 MB |
2544% |
117.5 KB |
3.2 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_FINAL (1173_J3R)
|
5s |
4s |
0s |
0s |
3.7 MB |
141% |
172.0 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1173_J3R)
|
6s |
5s |
0s |
0s |
14.0 MB |
97% |
3.6 MB |
248.5 KB |
0 bytes |
260.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP (1173_J3R)
|
41s |
13s |
9s |
18s |
482.2 MB |
101% |
3.1 GB |
588.0 KB |
0 bytes |
208.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:SNPEFF_SNPEFF (1173_J3R)
|
30s |
3s |
24s |
2s |
4.1 GB |
225% |
192.2 MB |
592.1 KB |
0 bytes |
888.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_FINAL (1173_J3R)
|
6s |
4s |
0s |
1s |
30.5 MB |
2408% |
399.4 KB |
44.0 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CNV_TO_TSV_HARMONIZED (1173_J3R)
|
4s |
3s |
- |
- |
12.9 MB |
88% |
1.5 MB |
1.4 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:TABIX_FINAL (1173_J3R)
|
6s |
4s |
0s |
1s |
3.5 MB |
133% |
141.7 KB |
2.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SUMMARY:HARMONIZE_SUMMARY_ALTERA_EXACT:ALTERA_EXACT_CREATE_SUMMARY (1173_J3R)
|
5s |
3s |
- |
- |
17.4 MB |
100% |
2.4 MB |
4.5 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1173_J3R)
|
5s |
3s |
0s |
1s |
13.4 MB |
1882% |
29.1 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_RENAME_CHRS (1173_J3R)
|
6s |
4s |
0s |
1s |
30.9 MB |
5890% |
148.7 KB |
2.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_BGZIP (1173_J3R)
|
46s |
44s |
0s |
1s |
3.6 MB |
96% |
192.1 KB |
19.3 KB |
0 bytes |
24.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_ALTERA_EXACT:EXACT_VCF_TO_TMB_MSI (1173_J3R)
|
4s |
3s |
- |
- |
13.3 MB |
93% |
1.1 MB |
730 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_NORMALIZE (1173_J3R)
|
1m 20s |
1m 19s |
- |
- |
13.2 MB |
99% |
1.7 MB |
4.7 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_INPUT_EMPTY (1173_J3R)
|
5s |
4s |
- |
- |
3.2 MB |
137% |
97.0 KB |
761 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1173_J3R)
|
19s |
16s |
1s |
1s |
14.1 MB |
1094% |
35.5 MB |
12.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1173_J3R)
|
4s |
2s |
0s |
1s |
13.8 MB |
1432% |
35.6 MB |
12.8 KB |
0 bytes |
20.0 KB |
1 |