|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:LIFTOVER_CNV (1173_KRT)
|
5s |
4s |
- |
- |
3.2 MB |
97% |
905.6 KB |
76.0 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_SORT (1173_KRT)
|
5s |
4s |
0s |
0s |
33.5 MB |
8344% |
323.8 KB |
175.1 KB |
0 bytes |
184.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_POSTLIFT_EMPTY (1173_KRT)
|
4s |
3s |
- |
- |
3.3 MB |
79% |
127.2 KB |
12.6 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_FINAL (1173_KRT)
|
5s |
4s |
0s |
0s |
3.7 MB |
114% |
216.1 KB |
10.6 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_POSTLIFT (1173_KRT)
|
5s |
3s |
0s |
1s |
27.7 MB |
5913% |
155.5 KB |
6.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1173_KRT)
|
15s |
13s |
0s |
1s |
14.5 MB |
106% |
3.6 MB |
248.4 KB |
0 bytes |
260.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP (1173_KRT)
|
36s |
6s |
11s |
18s |
422.8 MB |
101% |
3.1 GB |
2.1 MB |
0 bytes |
260.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:SNPEFF_SNPEFF (1173_KRT)
|
43s |
12s |
28s |
2s |
4.7 GB |
225% |
230.9 MB |
1.5 MB |
0 bytes |
1.7 MB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_FINAL (1173_KRT)
|
5s |
4s |
0s |
0s |
3.4 MB |
3305% |
1.3 MB |
193.5 KB |
0 bytes |
200.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:TABIX_FINAL (1173_KRT)
|
5s |
3s |
0s |
1s |
3.6 MB |
102% |
230.6 KB |
2.7 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CNV_TO_TSV_HARMONIZED (1173_KRT)
|
3s |
2s |
- |
- |
13.3 MB |
104% |
1.5 MB |
3.7 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SUMMARY:HARMONIZE_SUMMARY_ALTERA_EXACT:ALTERA_EXACT_CREATE_SUMMARY (1173_KRT)
|
5s |
3s |
- |
- |
15.0 MB |
100% |
2.5 MB |
4.9 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_NORMALIZE (1173_KRT)
|
29s |
27s |
- |
- |
13.4 MB |
94% |
1.7 MB |
4.5 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_RENAME_CHRS (1173_KRT)
|
5s |
3s |
0s |
1s |
26.7 MB |
5253% |
151.7 KB |
3.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_ALTERA_EXACT:EXACT_VCF_TO_TMB_MSI (1173_KRT)
|
29s |
27s |
- |
- |
13.4 MB |
94% |
1.1 MB |
738 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_BGZIP (1173_KRT)
|
4s |
3s |
0s |
0s |
3.5 MB |
102% |
410.1 KB |
83.5 KB |
0 bytes |
88.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_INPUT_EMPTY (1173_KRT)
|
16s |
14s |
- |
- |
3.3 MB |
72% |
106.5 KB |
760 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1173_KRT)
|
4s |
2s |
0s |
1s |
13.4 MB |
1512% |
35.6 MB |
12.2 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1173_KRT)
|
1m 20s |
1m 17s |
0s |
2s |
13.1 MB |
1476% |
35.6 MB |
12.2 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1173_KRT)
|
34s |
32s |
0s |
1s |
13.3 MB |
1453% |
29.1 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |