|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:LIFTOVER_CNV (1173_LAF)
|
19s |
18s |
- |
- |
3.2 MB |
104% |
802.4 KB |
15.3 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_SORT (1173_LAF)
|
4s |
3s |
0s |
0s |
31.8 MB |
8355% |
340.5 KB |
191.5 KB |
0 bytes |
196.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_POSTLIFT_EMPTY (1173_LAF)
|
3s |
2s |
- |
- |
3.3 MB |
129% |
108.6 KB |
3.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_FINAL (1173_LAF)
|
4s |
3s |
0s |
0s |
3.6 MB |
141% |
243.2 KB |
11.4 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_POSTLIFT (1173_LAF)
|
5s |
3s |
0s |
1s |
29.0 MB |
6244% |
151.0 KB |
2.0 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1173_LAF)
|
10s |
9s |
0s |
0s |
12.9 MB |
106% |
3.7 MB |
248.5 KB |
0 bytes |
260.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP (1173_LAF)
|
1m 11s |
29s |
9s |
32s |
83.3 MB |
100% |
3.0 GB |
322.2 KB |
0 bytes |
196.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:SNPEFF_SNPEFF (1173_LAF)
|
31s |
4s |
23s |
3s |
4.1 GB |
230% |
179.7 MB |
100.9 KB |
0 bytes |
360.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_FINAL (1173_LAF)
|
4s |
3s |
0s |
0s |
30.8 MB |
5401% |
225.5 KB |
12.3 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:TABIX_FINAL (1173_LAF)
|
5s |
3s |
0s |
1s |
3.6 MB |
172% |
144.4 KB |
2.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CNV_TO_TSV_HARMONIZED (1173_LAF)
|
4s |
3s |
- |
- |
13.1 MB |
85% |
1.5 MB |
682 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_BGZIP (1173_LAF)
|
5s |
4s |
0s |
0s |
3.5 MB |
98% |
444.0 KB |
94.3 KB |
0 bytes |
96.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_ALTERA_EXACT:EXACT_VCF_TO_TMB_MSI (1173_LAF)
|
19s |
17s |
- |
- |
13.5 MB |
119% |
1.1 MB |
739 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_NORMALIZE (1173_LAF)
|
5s |
3s |
- |
- |
13.6 MB |
106% |
1.7 MB |
5.1 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_INPUT_EMPTY (1173_LAF)
|
40s |
39s |
- |
- |
3.3 MB |
151% |
95.3 KB |
759 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1173_LAF)
|
4s |
2s |
0s |
1s |
13.6 MB |
1501% |
35.6 MB |
12.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1173_LAF)
|
6s |
3s |
1s |
1s |
14.4 MB |
1071% |
35.5 MB |
12.9 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1173_LAF)
|
5s |
3s |
0s |
1s |
13.1 MB |
1875% |
29.1 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1173_LAF)
|
30s |
28s |
0s |
1s |
13.5 MB |
1506% |
29.1 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_POST_RENAME (1173_LAF)
|
6s |
5s |
0s |
0s |
3.5 MB |
136% |
230.2 KB |
11.4 KB |
0 bytes |
16.0 KB |
1 |