|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_RENAME_CHRS (1173_M4Y)
|
6s |
5s |
0s |
0s |
3.6 MB |
3527% |
117.8 KB |
3.4 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_NORM_POSTLIFT (1173_M4Y)
|
20s |
4s |
7s |
8s |
33.5 MB |
270% |
3.0 GB |
199.6 KB |
0 bytes |
208.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:LIFTOVER_CNV (1173_M4Y)
|
3s |
2s |
- |
- |
3.2 MB |
111% |
939.7 KB |
93.2 KB |
0 bytes |
108.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_SORT (1173_M4Y)
|
5s |
3s |
0s |
1s |
3.8 MB |
4481% |
211.7 KB |
62.8 KB |
0 bytes |
72.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_POSTLIFT_EMPTY (1173_M4Y)
|
4s |
2s |
- |
- |
3.2 MB |
63% |
133.6 KB |
15.9 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_FINAL (1173_M4Y)
|
19s |
17s |
0s |
1s |
3.5 MB |
98% |
161.7 KB |
6.2 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_POSTLIFT (1173_M4Y)
|
11s |
10s |
0s |
0s |
3.6 MB |
2124% |
121.9 KB |
7.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1173_M4Y)
|
9s |
8s |
0s |
0s |
12.9 MB |
104% |
3.6 MB |
250.0 KB |
0 bytes |
260.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP (1173_M4Y)
|
32s |
6s |
10s |
15s |
557.2 MB |
104% |
3.1 GB |
1.9 MB |
0 bytes |
248.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_FINAL (1173_M4Y)
|
5s |
3s |
0s |
1s |
31.7 MB |
6132% |
1.2 MB |
173.0 KB |
0 bytes |
180.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:SNPEFF_SNPEFF (1173_M4Y)
|
31s |
4s |
25s |
1s |
4.3 GB |
247% |
200.3 MB |
1.4 MB |
0 bytes |
1.6 MB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CNV_TO_TSV_HARMONIZED (1173_M4Y)
|
4s |
3s |
- |
- |
12.9 MB |
101% |
1.5 MB |
4.8 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:TABIX_FINAL (1173_M4Y)
|
6s |
4s |
0s |
1s |
3.6 MB |
135% |
200.8 KB |
2.4 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_BGZIP (1173_M4Y)
|
1m 33s |
1m 32s |
0s |
0s |
3.5 MB |
149% |
224.1 KB |
28.7 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_NORMALIZE (1173_M4Y)
|
3s |
2s |
- |
- |
13.1 MB |
96% |
1.7 MB |
4.6 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_ALTERA_EXACT:EXACT_VCF_TO_TMB_MSI (1173_M4Y)
|
4s |
3s |
- |
- |
12.3 MB |
95% |
1.1 MB |
730 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_INPUT_EMPTY (1173_M4Y)
|
1m 7s |
1m 6s |
- |
- |
3.3 MB |
123% |
108.6 KB |
762 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1173_M4Y)
|
22s |
20s |
1s |
0s |
14.4 MB |
1113% |
35.5 MB |
12.2 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1173_M4Y)
|
6s |
4s |
0s |
1s |
13.3 MB |
1451% |
35.6 MB |
12.2 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1173_M4Y)
|
5s |
3s |
0s |
1s |
14.8 MB |
1764% |
29.1 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |