|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:LIFTOVER_CNV (1173_MHK)
|
16s |
15s |
- |
- |
3.1 MB |
119% |
830.5 KB |
31.2 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_NORM_POSTLIFT (1173_MHK)
|
31s |
15s |
7s |
8s |
33.5 MB |
274% |
3.0 GB |
207.0 KB |
0 bytes |
216.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_POSTLIFT_EMPTY (1173_MHK)
|
5s |
3s |
- |
- |
3.3 MB |
76% |
112.8 KB |
5.4 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_SORT (1173_MHK)
|
6s |
4s |
0s |
1s |
27.8 MB |
4978% |
227.2 KB |
78.2 KB |
0 bytes |
88.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_POSTLIFT (1173_MHK)
|
5s |
3s |
0s |
1s |
28.7 MB |
4201% |
152.1 KB |
3.2 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_FINAL (1173_MHK)
|
7s |
4s |
0s |
2s |
3.6 MB |
63% |
188.3 KB |
6.8 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1173_MHK)
|
5s |
4s |
0s |
0s |
14.4 MB |
105% |
3.6 MB |
248.4 KB |
0 bytes |
260.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP (1173_MHK)
|
38s |
9s |
10s |
18s |
321.7 MB |
101% |
3.1 GB |
816.1 KB |
0 bytes |
208.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:SNPEFF_SNPEFF (1173_MHK)
|
30s |
3s |
23s |
3s |
3.5 GB |
237% |
177.1 MB |
731.1 KB |
0 bytes |
1000.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_FINAL (1173_MHK)
|
5s |
3s |
0s |
1s |
27.8 MB |
6133% |
549.3 KB |
62.0 KB |
0 bytes |
72.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:TABIX_FINAL (1173_MHK)
|
5s |
4s |
0s |
0s |
3.7 MB |
119% |
167.2 KB |
2.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CNV_TO_TSV_HARMONIZED (1173_MHK)
|
5s |
4s |
- |
- |
13.7 MB |
96% |
1.5 MB |
1.4 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_BGZIP (1173_MHK)
|
4s |
3s |
0s |
0s |
3.6 MB |
115% |
248.1 KB |
35.8 KB |
0 bytes |
40.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_NORMALIZE (1173_MHK)
|
35s |
33s |
- |
- |
13.6 MB |
113% |
1.7 MB |
3.6 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_ALTERA_EXACT:EXACT_VCF_TO_TMB_MSI (1173_MHK)
|
35s |
34s |
- |
- |
12.7 MB |
99% |
1.1 MB |
730 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_INPUT_EMPTY (1173_MHK)
|
4s |
3s |
- |
- |
3.3 MB |
160% |
101.3 KB |
760 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_POST_RENAME (1173_MHK)
|
20s |
19s |
0s |
0s |
3.5 MB |
125% |
171.8 KB |
6.8 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:DEDUP_CNV_VCF (1173_MHK)
|
18s |
15s |
- |
- |
10.5 MB |
106% |
773.3 KB |
3.8 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_LIFTOVER (1173_MHK)
|
18s |
16s |
0s |
1s |
13.5 MB |
103% |
4.2 MB |
6.5 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_RENAME_CHRS (1173_MHK)
|
5s |
3s |
0s |
1s |
31.1 MB |
7209% |
187.5 KB |
33.5 KB |
0 bytes |
40.0 KB |
1 |