|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_NORM_POSTLIFT (1173_PDX)
|
21s |
5s |
7s |
8s |
33.7 MB |
243% |
3.0 GB |
209.8 KB |
0 bytes |
216.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:LIFTOVER_CNV (1173_PDX)
|
18s |
17s |
- |
- |
3.2 MB |
100% |
843.6 KB |
40.8 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_SORT (1173_PDX)
|
5s |
4s |
0s |
0s |
33.6 MB |
4280% |
233.0 KB |
84.0 KB |
0 bytes |
88.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_POSTLIFT_EMPTY (1173_PDX)
|
5s |
3s |
- |
- |
3.3 MB |
147% |
115.9 KB |
7.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_FINAL (1173_PDX)
|
5s |
3s |
0s |
1s |
3.4 MB |
96% |
191.0 KB |
7.2 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_POSTLIFT (1173_PDX)
|
5s |
3s |
0s |
1s |
27.8 MB |
3363% |
152.8 KB |
3.8 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1173_PDX)
|
4s |
3s |
0s |
0s |
12.0 MB |
99% |
3.6 MB |
248.4 KB |
0 bytes |
260.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP (1173_PDX)
|
35s |
6s |
10s |
18s |
268.7 MB |
101% |
3.1 GB |
1.0 MB |
0 bytes |
220.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:SNPEFF_SNPEFF (1173_PDX)
|
39s |
12s |
25s |
1s |
4.3 GB |
245% |
197.3 MB |
947.9 KB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_FINAL (1173_PDX)
|
4s |
3s |
0s |
0s |
28.1 MB |
6859% |
766.5 KB |
84.3 KB |
0 bytes |
92.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CNV_TO_TSV_HARMONIZED (1173_PDX)
|
4s |
2s |
- |
- |
13.1 MB |
84% |
1.5 MB |
1.9 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:TABIX_FINAL (1173_PDX)
|
5s |
3s |
0s |
1s |
3.7 MB |
102% |
178.9 KB |
2.4 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SUMMARY:HARMONIZE_SUMMARY_ALTERA_EXACT:ALTERA_EXACT_CREATE_SUMMARY (1173_PDX)
|
6s |
4s |
- |
- |
16.4 MB |
99% |
2.4 MB |
4.5 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1173_PDX)
|
20s |
18s |
0s |
1s |
13.0 MB |
1360% |
29.1 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1173_PDX)
|
48s |
46s |
0s |
1s |
27.3 MB |
1198% |
29.1 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_LIFTOVER (1173_PDX)
|
22s |
19s |
0s |
2s |
14.3 MB |
102% |
4.2 MB |
36.5 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_BGZIP (1173_PDX)
|
6s |
4s |
0s |
1s |
3.5 MB |
118% |
254.8 KB |
38.2 KB |
0 bytes |
40.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_NORMALIZE (1173_PDX)
|
5s |
3s |
- |
- |
13.8 MB |
105% |
1.7 MB |
25.9 KB |
0 bytes |
36.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_ALTERA_EXACT:EXACT_VCF_TO_TMB_MSI (1173_PDX)
|
33s |
32s |
- |
- |
12.5 MB |
89% |
1.1 MB |
731 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_INPUT_EMPTY (1173_PDX)
|
4s |
3s |
- |
- |
3.2 MB |
96% |
102.4 KB |
760 bytes |
0 bytes |
8.0 KB |
1 |