|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_NORM_POSTLIFT (1173_RQT)
|
21s |
5s |
7s |
8s |
25.1 MB |
188% |
3.0 GB |
187.3 KB |
0 bytes |
196.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_RENAME_CHRS (1173_RQT)
|
6s |
5s |
0s |
0s |
3.6 MB |
2710% |
114.9 KB |
1.9 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:BCFTOOLS_SORT (1173_RQT)
|
4s |
3s |
0s |
0s |
29.6 MB |
7624% |
186.0 KB |
37.4 KB |
0 bytes |
44.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:LIFTOVER_CNV (1173_RQT)
|
5s |
3s |
- |
- |
3.3 MB |
92% |
815.8 KB |
25.2 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_FINAL (1173_RQT)
|
6s |
5s |
0s |
0s |
3.7 MB |
157% |
168.5 KB |
4.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_POSTLIFT_EMPTY (1173_RQT)
|
3s |
1s |
- |
- |
3.3 MB |
77% |
111.6 KB |
4.8 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:FILTER_HOTSPOT_VCF (1173_RQT)
|
4s |
3s |
0s |
0s |
12.7 MB |
103% |
3.6 MB |
249.3 KB |
0 bytes |
260.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_POSTLIFT (1173_RQT)
|
11s |
9s |
0s |
1s |
3.6 MB |
3118% |
117.4 KB |
3.0 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:ENSEMBLVEP_VEP (1173_RQT)
|
38s |
9s |
10s |
18s |
227.3 MB |
100% |
3.1 GB |
1.8 MB |
0 bytes |
248.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:SNPEFF_SNPEFF (1173_RQT)
|
45s |
4s |
38s |
2s |
4.1 GB |
204% |
400.2 MB |
1.2 MB |
0 bytes |
1.6 MB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:BCFTOOLS_SORT_FINAL (1173_RQT)
|
5s |
4s |
0s |
0s |
32.0 MB |
5332% |
1001.4 KB |
97.4 KB |
0 bytes |
104.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CNV_TO_TSV_HARMONIZED (1173_RQT)
|
4s |
2s |
- |
- |
13.1 MB |
119% |
1.5 MB |
1.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:TABIX_FINAL (1173_RQT)
|
4s |
3s |
0s |
0s |
3.6 MB |
159% |
183.6 KB |
3.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_BGZIP (1173_RQT)
|
20s |
19s |
0s |
0s |
3.7 MB |
123% |
181.6 KB |
15.6 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SV:HARMONIZE_SV_ALTERA_EXACT:SV_NORMALIZE (1173_RQT)
|
38s |
37s |
- |
- |
13.0 MB |
101% |
1.7 MB |
3.2 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_ALTERA_EXACT:EXACT_VCF_TO_TMB_MSI (1173_RQT)
|
20s |
18s |
- |
- |
13.9 MB |
94% |
1.1 MB |
730 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_CNV:HARMONIZE_CNV_ALTERA_EXACT:CHECK_INPUT_EMPTY (1173_RQT)
|
48s |
46s |
- |
- |
3.2 MB |
40% |
100.1 KB |
761 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_FUSION:HARMONIZE_FUSION_ALTERA_EXACT:FUSION_NORMALIZE (1173_RQT)
|
6s |
4s |
1s |
0s |
14.4 MB |
966% |
35.5 MB |
12.2 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SPLICE:HARMONIZE_SPLICE_ALTERA_EXACT:SPLICE_NORMALIZE (1173_RQT)
|
5s |
3s |
0s |
1s |
13.3 MB |
1432% |
29.1 MB |
34.3 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_SNV:HARMONIZE_SNV_ALTERA_EXACT:TABIX_POST_RENAME (1173_RQT)
|
34s |
32s |
0s |
1s |
3.6 MB |
151% |
132.5 KB |
4.2 KB |
0 bytes |
8.0 KB |
1 |