NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT (FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1) - Test_Low_Read_v3 - Workflow Tracker

Runs
Test_Low_Read_v3
Tasks
SAMTOOLS_IDXSTATS_COUNT (FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1)

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Task Info

Status: succeeded
Hash: 2d4bff081cd7
Process: NFCORE_SAREK:SAREK:CRAM_FILTER_LOW_READS:SAMTOOLS_IDXSTATS_COUNT
Tag: FFPE_HD789_01_p1_gDNA_0001_A23L3H3LT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 01/2587df
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/2587df509dddaa9018ac059c224b41
Native ID: nf-012587df509dddaa9018ac059c224b41-6d951

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 1
Memory (peak / alloc): 17.3 MB / 12.0 GB
Process I/O (rchar / wchar): 6.2 MB / 117.4 KB
Disk I/O (read / write): 6.2 MB / 8.0 KB
Host: i-0e75e561a4047d805 ( on-demand)

Runtime

Submitted: Mar 04, 2026 9:20:51 AM
Completed: Mar 04, 2026 9:30:36 AM
Total Duration: 9m 44s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: failed
Hash: ef/30838f
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ef/30838f9422180cfaa155cef2b33cd6
Native ID: nf-ef30838f9422180cfaa155cef2b33cd6-975e6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 1
Memory (peak / alloc): - / 6.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0355e78fdb65bf3e0 ( spot)

Runtime

Submitted: Mar 04, 2026 9:11:01 AM
Completed: Mar 04, 2026 9:20:30 AM
Total Duration: 9m 28s

Phases

Queue: 55s
Execution: 8m 33s
Stage/Unstage: 0s