Process Directives

Container
292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
CPU / Memory
2 / 8.0 GB

Tasks

429 succeeded

CPU Usage(cores)

Peak Memory(GB)

rchar(MB)

wchar(MB)

read_bytes(B)

write_bytes(MB)

Total Duration(m)

Queue(s)

Execution(m)

Stage/Unstage(s)

Clear
succeeded 1029_4PQ-N1-BDNA-1_B23L5TMLT4_1;haplotypecaller 1m 9s 2s 1m 4s 3s 2.6 GB 219% 640.5 MB 18.9 MB 0 bytes 16.0 MB 1
succeeded 1029_4PQ-N1-BDNA-1_B23L5TMLT4_1;manta 1m 17s 9s 1m 6s 2s 3.0 GB 195% 627.5 MB 3.7 MB 0 bytes 852.0 KB 1
succeeded 1029_4PQ-N1-BDNA-1_B23L5TMLT4_1;sentieon_haplotyper 1m 7s 3s 1m 1s 3s 3.6 GB 216% 640.5 MB 19.4 MB 0 bytes 16.5 MB 1
succeeded 1029_4PQ-N1-BDNA-1_B23L5TMLT4_1;strelka 1m 9s 4s 1m 3s 2s 2.9 GB 173% 639.8 MB 15.8 MB 0 bytes 12.9 MB 1
succeeded 1029_4PQ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_4PQ-N1-BDNA-1_B23L5TMLT4_1;manta 32s 3s 26s 3s 2.7 GB 227% 205.7 MB 3.5 MB 0 bytes 588.0 KB 1
succeeded 1029_4PQ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_4PQ-N1-BDNA-1_B23L5TMLT4_1;manta 1m 5s 3s 1m 0s 2s 2.9 GB 194% 639.0 MB 3.7 MB 0 bytes 836.0 KB 1
succeeded 1029_4PQ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_4PQ-N1-BDNA-1_B23L5TMLT4_1;mutect2 1m 28s 3s 1m 22s 3s 4.3 GB 390% 645.0 MB 30.1 MB 0 bytes 27.2 MB 1
succeeded 1029_4PQ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_4PQ-N1-BDNA-1_B23L5TMLT4_1;strelka 1m 6s 3s 1m 0s 3s 2.8 GB 220% 641.1 MB 4.9 MB 0 bytes 2.0 MB 1
succeeded 1029_4PQ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_4PQ-N1-BDNA-1_B23L5TMLT4_1;strelka 31s 3s 25s 3s 2.8 GB 336% 165.4 MB 8.4 MB 0 bytes 5.5 MB 1
succeeded 1029_4PQ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_4PQ-N1-BDNA-1_B23L5TMLT4_1;tnseq 1m 42s 3s 1m 36s 3s 2.9 GB 655% 651.0 MB 70.1 MB 0 bytes 67.3 MB 1
succeeded 1029_4PQ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_4PQ-N1-BDNA-1_B23L5TMLT4_1;tnseq 1m 37s 2s 1m 32s 3s 4.0 GB 358% 651.1 MB 70.6 MB 0 bytes 67.8 MB 1
succeeded 1029_BFGZ-N1-BDNA-1_B23L5TMLT4_1;haplotypecaller 1m 9s 3s 1m 3s 3s 2.9 GB 189% 640.5 MB 19.3 MB 0 bytes 16.5 MB 1
succeeded 1029_BFGZ-N1-BDNA-1_B23L5TMLT4_1;manta 1m 16s 15s 58s 3s 3.1 GB 204% 598.9 MB 3.6 MB 0 bytes 808.0 KB 1
succeeded 1029_BFGZ-N1-BDNA-1_B23L5TMLT4_1;sentieon_haplotyper 1m 8s 3s 1m 2s 3s 3.6 GB 210% 640.6 MB 19.8 MB 0 bytes 17.0 MB 1
succeeded 1029_BFGZ-N1-BDNA-1_B23L5TMLT4_1;strelka 1m 10s 3s 1m 5s 2s 2.9 GB 212% 639.9 MB 16.0 MB 0 bytes 13.2 MB 1
succeeded 1029_BFGZ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_BFGZ-N1-BDNA-1_B23L5TMLT4_1;manta 53s 3s 48s 2s 2.8 GB 208% 472.1 MB 3.6 MB 0 bytes 720.0 KB 1
succeeded 1029_BFGZ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_BFGZ-N1-BDNA-1_B23L5TMLT4_1;manta 59s 2s 53s 4s 2.7 GB 198% 570.9 MB 3.7 MB 0 bytes 828.0 KB 1
succeeded 1029_BFGZ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_BFGZ-N1-BDNA-1_B23L5TMLT4_1;mutect2 2m 38s 12s 2m 22s 4s 5.4 GB 165% 645.2 MB 31.9 MB 0 bytes 29.1 MB 1
succeeded 1029_BFGZ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_BFGZ-N1-BDNA-1_B23L5TMLT4_1;strelka 29s 2s 25s 2s 2.5 GB 268% 165.8 MB 12.7 MB 0 bytes 9.8 MB 1
succeeded 1029_BFGZ-T1-TDNA-1_A23L3H3LT4_1_vs_1029_BFGZ-N1-BDNA-1_B23L5TMLT4_1;strelka 1m 6s 2s 1m 1s 3s 2.6 GB 181% 639.1 MB 4.8 MB 0 bytes 2.0 MB 1
429 items found |
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