NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (NA12878_c_0002_gDNA_0001_B23KYWJLT4_1) - autorun-sarek-cgp_atx_experiments-chunk3 - Workflow Tracker

Runs
autorun-sare..ents-chunk3
Tasks
CONPAIR_PILEUP (NA12878_c_0002_gDNA_0001_B23KYWJLT4_1)

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Task Info

Status: aborted
Hash: dfa1fedb1e49
Process: NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP
Tag: NA12878_c_0002_gDNA_0001_B23KYWJLT4_1
Attempts: 3

Attempt 3

Execution

Status: aborted
Hash: ab/1777fe
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/1777fe587d322cc3722e6c78cf1551
Native ID: nf-ab1777fe587d322cc3722e6c78cf1551-2377b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 24.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Mar 02, 2026 3:04:55 PM
Completed: Mar 02, 2026 3:04:59 PM
Total Duration: -

Phases

Queue: 2405h 17m
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: failed
Hash: 91/aabad1
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/aabad1419e2c9887a2f8f24b92f41b
Native ID: nf-91aabad1419e2c9887a2f8f24b92f41b-7c72d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 16.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0d187c71d45168f2a ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:03:54 PM
Completed: Mar 02, 2026 3:04:30 PM
Total Duration: 35s

Phases

Queue: 26s
Execution: 9s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: 2c/263846
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/2638469fe73497962e7c883282193e
Native ID: nf-2c2638469fe73497962e7c883282193e-6671a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-00f5aadd457eca5f5 ( spot)

Runtime

Submitted: Mar 02, 2026 3:02:11 PM
Completed: Mar 02, 2026 3:03:01 PM
Total Duration: 49s

Phases

Queue: 41s
Execution: 8s
Stage/Unstage: 0s