NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (NA12878_c_0002_gDNA_0001_B23KYWJLT4_1) - autorun-sarek-cgp_atx_experiments-chunk3 - Workflow Tracker

Runs
autorun-sare..ents-chunk3
Tasks
SAMTOOLS_STATS (NA12878_c_0002_gDNA_0001_B23KYWJLT4_1)

Login

Task Info

Status: failed
Hash: f22d139b4bf0
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS
Tag: NA12878_c_0002_gDNA_0001_B23KYWJLT4_1
Attempts: 3

Attempt 3

Execution

Status: failed
Hash: 99/5019d5
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/99/5019d5273552d73eb3d631a5312265
Native ID: nf-995019d5273552d73eb3d631a5312265-8dec4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 24.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0d7b00bbb9c0fa962 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:03:58 PM
Completed: Mar 02, 2026 3:04:28 PM
Total Duration: 29s

Phases

Queue: 20s
Execution: 9s
Stage/Unstage: 0s

Attempt 2

Execution

Status: failed
Hash: 2c/51c100
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/51c1005834370fd623e8158d98cbde
Native ID: nf-2c51c1005834370fd623e8158d98cbde-76103

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 16.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0f88ba919170509b8 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:02:55 PM
Completed: Mar 02, 2026 3:03:35 PM
Total Duration: 39s

Phases

Queue: 30s
Execution: 9s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: a0/dcfd46
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/dcfd46c2ee0c51208ae7d453218a2b
Native ID: nf-a0dcfd46c2ee0c51208ae7d453218a2b-b1d0f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0c1a877f9321f51c0 ( spot)

Runtime

Submitted: Mar 02, 2026 3:02:09 PM
Completed: Mar 02, 2026 3:02:22 PM
Total Duration: 12s

Phases

Queue: 4s
Execution: 8s
Stage/Unstage: 0s