NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:MUTECT2 (NA12878_c_0002_gDNA_0001_B23KYWJLT4_1;chr19_47340800-47341813) - autorun-sarek-cgp_atx_experiments-chunk3 - Workflow Tracker

Runs
autorun-sare..ents-chunk3
Tasks
MUTECT2 (NA12878_c_0002_gDNA_0001_B23KYWJLT4_1;chr19_47340800-47341813)

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Task Info

Status: new
Hash: f827c4090a9e
Process: NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_MUTECT2:MUTECT2
Tag: NA12878_c_0002_gDNA_0001_B23KYWJLT4_1;chr19_47340800-47341813
Attempts: 3

Attempt 3

Execution

Status: new
Hash: ac/6f8dfa
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/gatk4:4.5.0.0--py36hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ac/6f8dfa2741ce46450a12afe44d0b86

View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 24.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: -
Completed: -
Total Duration: -

Phases

Queue: -
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: failed
Hash: 76/e79f91
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/gatk4:4.5.0.0--py36hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/76/e79f916e8b2215123dd728c0d5a13e
Native ID: nf-76e79f916e8b2215123dd728c0d5a13e-05d7a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 16.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Mar 02, 2026 3:04:02 PM
Completed: Mar 02, 2026 3:04:58 PM
Total Duration: -

Phases

Queue: 2398h 34m
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: failed
Hash: 33/013c51
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/gatk4:4.5.0.0--py36hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/33/013c51ba0985c1f174fedaf83c5932
Native ID: nf-33013c51ba0985c1f174fedaf83c5932-b3338

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0f88ba919170509b8 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:02:58 PM
Completed: Mar 02, 2026 3:03:36 PM
Total Duration: 37s

Phases

Queue: 23s
Execution: 14s
Stage/Unstage: 0s