NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (869_BIT-N1-BDNA-1_B23H3TCLT3_1;SNP_GRCh38_hg38_wChr) - autorun-sarek-cgp_dna_ssf-chunk1 - Workflow Tracker

Runs
autorun-sare.._ssf-chunk1
Tasks
BCFTOOLS_MPILEUP (869_BIT-N1-BDNA-1_B23H3TCLT3_1;SNP_GRCh38_hg38_wChr)

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Task Info

Status: new
Hash: fc255bfcae9c
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 869_BIT-N1-BDNA-1_B23H3TCLT3_1;SNP_GRCh38_hg38_wChr
Attempts: 3

Attempt 3

Execution

Status: new
Hash: 27/f108ab
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/f108abf5ed38f6c252e6691bce3465

View Workdir

Resources

CPU (used / alloc): - / 6
Memory (peak / alloc): - / 6.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: -
Completed: -
Total Duration: -

Phases

Queue: -
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: failed
Hash: 04/2e4d00
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/2e4d006a6c5525f9bdef610e5d6ed1
Native ID: nf-042e4d006a6c5525f9bdef610e5d6ed1-88b78

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 4.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0f88ba919170509b8 ( on-demand)

Runtime

Submitted: Mar 02, 2026 3:04:45 PM
Completed: Mar 02, 2026 3:04:57 PM
Total Duration: 11s

Phases

Queue: 3s
Execution: 8s
Stage/Unstage: 0s

Attempt 1

Execution

Status: failed
Hash: 94/231a34
Exit Code: 1
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/231a346e8a55dbe322cd6efb438b15
Native ID: nf-94231a346e8a55dbe322cd6efb438b15-44c34

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-011b4f33c759c0c86 ( spot)

Runtime

Submitted: Mar 02, 2026 3:02:33 PM
Completed: Mar 02, 2026 3:02:49 PM
Total Duration: 15s

Phases

Queue: 5s
Execution: 10s
Stage/Unstage: 0s