Prefix: s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/daq/20260130_LH00166_0233_A23LGTTLT4__aa3fd045--20260226-233240
| Path | ||
|---|---|---|
| /reports/raw_qc/seqtool/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8.md/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8.md.depth.gz | Feb 27, 2026 12:00 AM | |
| /alignments/recalibrated/HCT15_FFPE_01_gDNA_0001_A23LGTTLT4_9/HCT15_FFPE_01_gDNA_0001_A23LGTTLT4_9.recalibrated.bam | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/seqtool/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2.md/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2.md.depth.gz | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/seqtool/FFPE_HRD_H_01_gDNA_0002_A23LGTTLT4_1/FFPE_HRD_H_01_gDNA_0002_A23LGTTLT4_1.md/FFPE_HRD_H_01_gDNA_0002_A23LGTTLT4_1.md.depth.gz | Feb 27, 2026 12:00 AM | |
| /reports/postdedup_qc.json | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/samtools/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8.stats | Feb 27, 2026 12:00 AM | |
| /reports/versions.yml | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/samtools/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8/versions.yml | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/samtools/HCT15_FFPE_01_gDNA_0001_A23LGTTLT4_9/versions.yml | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/seqtool/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8.md/full_bed.bed | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/seqtool/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2.md/reads_per_target.xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed.tsv | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/samtools/HCT15_FFPE_01_gDNA_0001_A23LGTTLT4_9/HCT15_FFPE_01_gDNA_0001_A23LGTTLT4_9.stats | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/seqtool/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2.md/gc_bias_qc.xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed.tsv | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/seqtool/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2.md/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2.md.depth_hist.tsv | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/seqtool/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2.md/read_qc.altera_v3_targets_coding_postQC_hg38.bed.tsv | Feb 27, 2026 12:00 AM | |
| /alignments/recalibrated/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8.recalibrated.bam | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/seqtool/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2.md/fragsize.fragsize.table | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/seqtool/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8/HCT116_FFPE_01_gDNA_0001_A23LGTTLT4_8.md/depth_stats.xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed.tsv | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/seqtool/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2.md/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2.md.depth.png | Feb 27, 2026 12:00 AM | |
| /reports/raw_qc/seqtool/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2/FFPE_HRD_L_01_gDNA_0001_A23LGTTLT4_2.md/read_qc.foresight_clarity_targets_hg38.bed.tsv | Feb 27, 2026 12:00 AM |