File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_21.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_21.FusionInspector.fusions.abridged.tsv
- Size
- 4.6 KB
- Workflow Run
- dev_rna_exp0001R_2cae617
- Published
- May 16, 2026 6:10 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 704 | 2 | 704.00 | 1.99 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 26 | 1808 | 26.19 | 0.39 | GT | 1.8892 | AG | 1.7819 | 2.5408 | 627 | 0 |
| FGFR3--TACC3 | 10 | 1 | 10.00 | 0.01 | FGFR3^ENSG00000068078.20 | 9836 | chr4:1806892:+ | TACC3^ENSG00000013810.20 | 27633 | chr4:1739745:+ | INCL_NON_REF_SPLICE | YES | 60 | 2114 | 0.20 | 0.01 | GT | 1.9656 | GT | 1.8892 | 0.036 | 612 | 0 |
| TMPRSS2--ERG | 480 | 0 | 480.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 12 | 481.00 | 37.00 | GT | 1.6895 | AG | 1.9219 | 1.7275 | 1104 | 0 |
| TPM3--NTRK1 | 188 | 1 | 188.00 | 1.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 5224 | 1 | 0.04 | 95.00 | GT | 1.9329 | AG | 1.6895 | 0.6802 | 355 | 0 |
| FGFR3--BAIAP2L1 | 170 | 1 | 170.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 26 | 31 | 6.37 | 5.38 | GT | 1.8892 | AG | 1.8062 | 0.6154 | 1171 | 0 |
| STX16--NPEPL1 | 168 | 1 | 168.00 | 0.94 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 914 | 115 | 0.19 | 1.47 | GT | 1.7968 | AG | 1.8256 | 0.608 | 1940 | 0 |
| STX16--NPEPL1 | 10 | 1 | 10.00 | 0.06 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 927 | 115 | 0.01 | 0.10 | GT | 1.8062 | AG | 1.8256 | 0.0362 | 2729 | 0 |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | STX16^ENSG00000124222.22 | 1835 | chr20:58652087:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1411 | 115 | 0.00 | 0.02 | GT | 1.9899 | AG | 1.8256 | 0.0036 | 1258 | 0 |
| LMNA--NTRK1 | 166 | 0 | 166.00 | 0.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1176 | 31 | 0.14 | 5.22 | GT | 1.7465 | AG | 1.5058 | 0.5974 | 947 | 0 |
| NCOA4--RET | 152 | 1 | 152.00 | 1.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1382 | 39 | 0.11 | 3.85 | GT | 1.9086 | AG | 1.8323 | 0.5506 | 5144 | 0 |
| CCDC6--RET | 117 | 0 | 117.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1288 | 39 | 0.09 | 2.95 | GT | 1.8892 | AG | 1.8323 | 0.4211 | 2092 | 0 |
| SLC34A2--ROS1 | 113 | 6 | 113.00 | 6.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 5 | 120.00 | 20.00 | GT | 1.8892 | AG | 1.7465 | 0.4283 | 999 | 0 |
| ETV6--NTRK3 | 112 | 0 | 112.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1498 | 0 | 0.08 | 113.00 | GT | 1.7819 | AG | 1.9656 | 0.4031 | 1252 | 0 |
| KIF5B--RET | 94 | 1 | 94.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 859 | 3 | 0.11 | 24.00 | GT | 1.9656 | AG | 1.9656 | 0.3419 | 3178 | 0 |
| EGFR--SEPTIN14 | 87 | 1 | 87.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 1 | 26 | 44.50 | 3.30 | GT | 1.8892 | AG | 1.9899 | 0.3167 | 658 | 0 |
| CD74--ROS1 | 82 | 1 | 82.00 | 0.94 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 16569 | 5 | 0.01 | 14.00 | GT | 1.7819 | AG | 1.7465 | 0.2985 | 2407 | 0 |
| CD74--ROS1 | 5 | 1 | 5.00 | 0.06 | CD74^ENSG00000019582.16 | 4989 | chr5:150404681:- | ROS1^ENSG00000047936.11 | 12651 | chr6:117425921:- | INCL_NON_REF_SPLICE | NO | 18044 | 0 | 0.00 | 7.00 | GG | 1.7819 | TT | 1.9656 | 0.0182 | 3299 | 0 |
| TLK2--AC240565.1 | 73 | 0 | 73.00 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 432 | 40 | 0.17 | 1.80 | GT | 1.8892 | AG | 1.8892 | 0.2627 | 1734 | 0 |
| SLC45A3--BRAF | 71 | 0 | 71.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 1013 | 72.00 | 0.07 | GT | 1.5628 | AG | 1.7465 | 0.2555 | 2599 | 0 |
| PAX8--PPARG | 57 | 0 | 57.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 41 | 6 | 1.38 | 8.29 | GT | 1.8295 | AG | 1.9329 | 0.2051 | 1923 | 0 |
| TFG--NTRK1 | 54 | 0 | 54.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 980 | 1 | 0.06 | 27.50 | GT | 1.9329 | AG | 1.6895 | 0.1943 | 883 | 0 |
| BX571818.1--TMEM200A | 23 | 0 | 23.00 | 0.00 | BX571818.1^ENSG00000285417.1 | 5765 | chr1:206053265:+ | TMEM200A^ENSG00000164484.12 | 19910 | chr6:130440407:+ | ONLY_REF_SPLICE | YES | 188 | 86 | 0.13 | 0.28 | GT | 1.9656 | AG | 1.7465 | 0.0828 | 1493 | 0 |
23 rows