File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_11.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_11.FusionInspector.fusions.abridged.tsv
- Size
- 5.3 KB
- Workflow Run
- dev_rna_exp0001R_2cae617
- Published
- May 16, 2026 6:18 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 2321 | 3 | 2321.00 | 3.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 30 | 2298 | 75.00 | 1.01 | GT | 1.8892 | AG | 1.7819 | 7.891 | 627 | 0 |
| TMPRSS2--ERG | 1755 | 0 | 1755.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 4 | 31 | 351.20 | 54.88 | GT | 1.6895 | AG | 1.9219 | 5.959 | 1104 | 0 |
| FGFR3--BAIAP2L1 | 730 | 2 | 730.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 33 | 28 | 21.56 | 25.28 | GT | 1.8892 | AG | 1.8062 | 2.4855 | 1171 | 0 |
| LMNA--NTRK1 | 612 | 2 | 612.00 | 2.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2541 | 133 | 0.24 | 4.59 | GT | 1.7465 | AG | 1.5058 | 2.0848 | 947 | 0 |
| LMNA--NTRK1 | 7 | 0 | 7.00 | 0.00 | LMNA^ENSG00000160789.23 | 17725 | chr1:156130765:+ | NTRK1^ENSG00000198400.13 | 40284 | chr1:156874901:+ | INCL_NON_REF_SPLICE | YES | 2619 | 92 | 0.00 | 0.09 | TG | 1.7968 | CC | 1.8892 | 0.0238 | 938 | 0 |
| ETV6--NTRK3 | 580 | 3 | 580.00 | 3.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1986 | 11 | 0.29 | 48.67 | GT | 1.7819 | AG | 1.9656 | 1.9795 | 1252 | 0 |
| TPM3--NTRK1 | 552 | 1 | 552.00 | 1.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 5672 | 13 | 0.10 | 39.57 | GT | 1.9329 | AG | 1.6895 | 1.8777 | 355 | 0 |
| TPM3--NTRK1 | 6 | 0 | 6.00 | 0.00 | TPM3^ENSG00000143549.21 | 11750 | chr1:154172039:- | NTRK1^ENSG00000198400.13 | 42100 | chr1:156874601:+ | INCL_NON_REF_SPLICE | YES | 6687 | 58 | 0.00 | 0.12 | TG | 1.7819 | GG | 1.2310 | 0.0204 | 69 | 1 |
| NCOA4--RET | 543 | 0 | 543.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 2007 | 161 | 0.27 | 3.36 | GT | 1.9086 | AG | 1.8323 | 1.8437 | 5144 | 0 |
| SLC34A2--ROS1 | 398 | 4 | 398.00 | 3.97 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 23 | 403.00 | 16.79 | GT | 1.8892 | AG | 1.7465 | 1.3649 | 999 | 0 |
| SLC34A2--ROS1 | 4 | 3 | 4.00 | 0.03 | SLC34A2^ENSG00000157765.13 | 6088 | chr4:25664334:+ | ROS1^ENSG00000047936.11 | 58028 | chr6:117324412:- | INCL_NON_REF_SPLICE | YES | 0 | 29 | 8.00 | 0.27 | GA | 1.7465 | TG | 1.8892 | 0.0137 | 1002 | 0 |
| CCDC6--RET | 388 | 1 | 388.00 | 1.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1542 | 161 | 0.25 | 2.41 | GT | 1.8892 | AG | 1.8323 | 1.3208 | 2092 | 0 |
| EML4--ALK | 339 | 0 | 339.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 445 | 40 | 0.76 | 8.29 | GT | 1.6895 | AG | 1.9086 | 1.1511 | 1550 | 0 |
| KIF5B--RET | 309 | 1 | 309.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 1012 | 6 | 0.31 | 44.43 | GT | 1.9656 | AG | 1.9656 | 1.0526 | 3178 | 0 |
| CD74--ROS1 | 288 | 5 | 288.00 | 4.88 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 18826 | 23 | 0.02 | 12.25 | GT | 1.7819 | AG | 1.7465 | 0.9945 | 2407 | 0 |
| CD74--ROS1 | 4 | 5 | 4.00 | 0.07 | CD74^ENSG00000019582.16 | 4989 | chr5:150404681:- | ROS1^ENSG00000047936.11 | 12651 | chr6:117425921:- | INCL_NON_REF_SPLICE | NO | 20402 | 0 | 0.00 | 10.00 | GG | 1.7819 | TT | 1.9656 | 0.0138 | 3299 | 0 |
| CD74--ROS1 | 3 | 5 | 3.00 | 0.05 | CD74^ENSG00000019582.16 | 4987 | chr5:150404683:- | ROS1^ENSG00000047936.11 | 48729 | chr6:117324417:- | INCL_NON_REF_SPLICE | YES | 20559 | 1 | 0.00 | 4.50 | AA | 1.8295 | TT | 1.5301 | 0.0104 | 2405 | 0 |
| EGFR--SEPTIN14 | 239 | 1 | 239.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 6 | 28 | 34.43 | 8.31 | GT | 1.8892 | AG | 1.9899 | 0.8149 | 658 | 0 |
| TFG--NTRK1 | 203 | 1 | 203.00 | 1.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 1283 | 13 | 0.16 | 14.64 | GT | 1.9329 | AG | 1.6895 | 0.6927 | 883 | 0 |
| PAX8--PPARG | 196 | 0 | 196.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 68 | 8 | 2.86 | 21.89 | GT | 1.8295 | AG | 1.9329 | 0.6655 | 1923 | 0 |
| STX16--NPEPL1 | 182 | 0 | 182.00 | 0.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 918 | 163 | 0.20 | 1.12 | GT | 1.7968 | AG | 1.8256 | 0.618 | 1940 | 0 |
| STX16--NPEPL1 | 4 | 0 | 4.00 | 0.00 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1028 | 163 | 0.00 | 0.03 | GT | 1.8062 | AG | 1.8256 | 0.0136 | 2729 | 0 |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 19290 | chr20:58693737:+ | ONLY_REF_SPLICE | YES | 918 | 919 | 0.00 | 0.00 | GT | 1.7968 | AG | 1.7819 | 0.0034 | 1248 | 0 |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | STX16^ENSG00000124222.22 | 7080 | chr20:58670603:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1199 | 163 | 0.00 | 0.01 | GT | 1.9086 | AG | 1.8256 | 0.0034 | 2386 | 0 |
| SLC45A3--BRAF | 145 | 0 | 145.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 2 | 1154 | 48.67 | 0.13 | GT | 1.5628 | AG | 1.7465 | 0.4923 | 2599 | 0 |
| AL391056.1--ATAD5 | 16 | 0 | 16.00 | 0.00 | AL391056.1^ENSG00000227619.3 | 5982 | chr9:129582768:+ | ATAD5^ENSG00000176208.9 | 15120 | chr17:30837206:+ | ONLY_REF_SPLICE | YES | 1 | 228 | 8.50 | 0.07 | GT | 1.9329 | AG | 1.8295 | 0.0543 | 1935 | 0 |
27 rows