File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_1.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_1.FusionInspector.fusions.abridged.tsv
- Size
- 5.3 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:00 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 3074 | 5 | 3074.00 | 4.99 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 112 | 1870 | 27.26 | 1.65 | GT | 1.8892 | AG | 1.7819 | 31.2591 | 627 | 0 |
| FGFR3--TACC3 | 6 | 5 | 6.00 | 0.01 | FGFR3^ENSG00000068078.20 | 9880 | chr4:1806936:+ | TACC3^ENSG00000013810.20 | 27593 | chr4:1739705:+ | INCL_NON_REF_SPLICE | YES | 10 | 1933 | 1.09 | 0.01 | GA | 1.8892 | TA | 1.5219 | 0.061 | 623 | 0 |
| FGFR3--TACC3 | 3 | 0 | 3.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9555 | chr4:1806611:+ | TACC3^ENSG00000013810.20 | 27632 | chr4:1739744:+ | INCL_NON_REF_SPLICE | YES | 1234 | 2218 | 0.00 | 0.00 | TG | 1.7232 | GG | 1.9656 | 0.0305 | 493 | 0 |
| TMPRSS2--ERG | 1596 | 0 | 1596.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 26 | 54 | 59.15 | 29.04 | GT | 1.6895 | AG | 1.9219 | 16.2032 | 1104 | 0 |
| LMNA--NTRK1 | 1068 | 4 | 1068.00 | 4.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2689 | 203 | 0.40 | 5.26 | GT | 1.7465 | AG | 1.5058 | 10.8833 | 947 | 0 |
| FGFR3--BAIAP2L1 | 803 | 0 | 803.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 114 | 29 | 6.99 | 26.80 | GT | 1.8892 | AG | 1.8062 | 8.1524 | 1171 | 0 |
| ETV6--NTRK3 | 568 | 1 | 568.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1443 | 5 | 0.39 | 95.00 | GT | 1.7819 | AG | 1.9656 | 5.7768 | 1252 | 0 |
| NCOA4--RET | 536 | 0 | 536.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1325 | 324 | 0.40 | 1.65 | GT | 1.9086 | AG | 1.8323 | 5.4417 | 5144 | 0 |
| NCOA4--RET | 3 | 0 | 3.00 | 0.00 | NCOA4^ENSG00000266412.6 | 7500 | chr10:46014458:- | RET^ENSG00000165731.20 | 30123 | chr10:43116580:+ | INCL_NON_REF_SPLICE | YES | 937 | 309 | 0.00 | 0.01 | CT | 1.9656 | AC | 1.7968 | 0.0305 | 5486 | 0 |
| CCDC6--RET | 508 | 1 | 508.00 | 1.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1080 | 324 | 0.47 | 1.57 | GT | 1.8892 | AG | 1.8323 | 5.1676 | 2092 | 0 |
| TPM3--NTRK1 | 499 | 2 | 499.00 | 2.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3406 | 22 | 0.15 | 21.83 | GT | 1.9329 | AG | 1.6895 | 5.0863 | 355 | 0 |
| SLC45A3--BRAF | 271 | 0 | 271.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 1 | 551 | 136.00 | 0.49 | GT | 1.5628 | AG | 1.7465 | 2.7513 | 2599 | 0 |
| KIF5B--RET | 255 | 2 | 255.00 | 2.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 555 | 13 | 0.46 | 18.43 | GT | 1.9656 | AG | 1.9656 | 2.6092 | 3178 | 0 |
| PAX8--PPARG | 255 | 0 | 255.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 52 | 6 | 4.83 | 36.57 | GT | 1.8295 | AG | 1.9329 | 2.5889 | 1923 | 0 |
| CD74--ROS1 | 213 | 1 | 213.00 | 0.98 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 17580 | 8 | 0.01 | 23.89 | GT | 1.7819 | AG | 1.7465 | 2.1724 | 2407 | 0 |
| CD74--ROS1 | 4 | 1 | 4.00 | 0.02 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48729 | chr6:117324417:- | INCL_NON_REF_SPLICE | YES | 17580 | 0 | 0.00 | 6.00 | GT | 1.7819 | TT | 1.5301 | 0.0408 | 2408 | 0 |
| EML4--ALK | 206 | 0 | 206.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 169 | 33 | 1.22 | 6.09 | GT | 1.6895 | AG | 1.9086 | 2.0914 | 1550 | 0 |
| SLC34A2--ROS1 | 175 | 2 | 175.00 | 2.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 9 | 178.00 | 17.80 | GT | 1.8892 | AG | 1.7465 | 1.797 | 999 | 0 |
| SLC34A2--ROS1 | 3 | 0 | 3.00 | 0.00 | SLC34A2^ENSG00000157765.13 | 6088 | chr4:25664334:+ | ROS1^ENSG00000047936.11 | 58030 | chr6:117324410:- | INCL_NON_REF_SPLICE | YES | 0 | 18 | 4.00 | 0.21 | GA | 1.7465 | AT | 1.9086 | 0.0305 | 1004 | 0 |
| EGFR--SEPTIN14 | 113 | 1 | 113.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 4 | 4 | 23.00 | 23.00 | GT | 1.8892 | AG | 1.9899 | 1.1574 | 658 | 0 |
| TFG--NTRK1 | 105 | 1 | 105.00 | 1.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 460 | 22 | 0.23 | 4.65 | GT | 1.9329 | AG | 1.6895 | 1.0762 | 883 | 0 |
| MRPS18A--ESCO1 | 15 | 0 | 15.00 | 0.00 | MRPS18A^ENSG00000096080.12 | 1124 | chr6:43687668:- | ESCO1^ENSG00000141446.11 | 11695 | chr18:21593488:- | ONLY_REF_SPLICE | YES | 554 | 9 | 0.03 | 1.60 | GT | 1.7232 | AG | 1.7819 | 0.1523 | 1001 | 0 |
| AGAP3--HOXD11 | 4 | 0 | 4.00 | 0.00 | AGAP3^ENSG00000133612.19 | 1978 | chr7:151086808:+ | HOXD11^ENSG00000128713.14 | 32027 | chr2:176107582:+ | INCL_NON_REF_SPLICE | YES | 9 | 0 | 0.50 | 5.00 | GC | 1.2310 | CC | 0.9183 | 0.0406 | 4 | 37 |
| CTNNB1--ULK4 | 2 | 0 | 2.00 | 0.00 | CTNNB1^ENSG00000168036.18 | 3992 | chr3:41199670:+ | ULK4^ENSG00000168038.11 | 48796 | chr3:41835971:- | ONLY_REF_SPLICE | YES | 1318 | 20 | 0.00 | 0.14 | GT | 1.8062 | AG | 1.8295 | 0.0203 | 2283 | 0 |
| PRRT3-AS1--CRELD1 | 2 | 0 | 2.00 | 0.00 | PRRT3-AS1^ENSG00000230082.1 | 2066 | chr3:9948469:+ | CRELD1^ENSG00000163703.19 | 6855 | chr3:9934420:+ | ONLY_REF_SPLICE | YES | 0 | 128 | 3.00 | 0.02 | GT | 1.9656 | AG | 1.7819 | 0.0203 | 68 | 1 |
| SLC12A6--PTBP3 | 1 | 0 | 1.00 | 0.00 | SLC12A6^ENSG00000140199.13 | 2651 | chr15:34336410:- | PTBP3^ENSG00000119314.16 | 36618 | chr9:112297916:- | ONLY_REF_SPLICE | YES | 211 | 1539 | 0.01 | 0.00 | GT | 1.8892 | AG | 1.8295 | 0.0102 | 2931 | 0 |
27 rows