File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_46.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_46.FusionInspector.fusions.abridged.tsv
- Size
- 4.5 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:05 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 123 | 0 | 123.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 6 | 720 | 17.71 | 0.17 | GT | 1.8892 | AG | 1.7819 | 1.2558 | 627 | 0 |
| TMPRSS2--ERG | 97 | 0 | 97.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 0 | 98.00 | 98.00 | GT | 1.6895 | AG | 1.9219 | 0.9904 | 1104 | 0 |
| NCOA4--RET | 30 | 0 | 30.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 588 | 6 | 0.05 | 4.43 | GT | 1.9086 | AG | 1.8323 | 0.3063 | 5144 | 0 |
| CCDC6--RET | 23 | 0 | 23.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 419 | 6 | 0.06 | 3.43 | GT | 1.8892 | AG | 1.8323 | 0.2348 | 2092 | 0 |
| ETV6--NTRK3 | 22 | 1 | 22.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 608 | 0 | 0.04 | 24.00 | GT | 1.7819 | AG | 1.9656 | 0.2348 | 1252 | 0 |
| TFG--NTRK1 | 21 | 0 | 21.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 342 | 1 | 0.06 | 11.00 | GT | 1.9329 | AG | 1.6895 | 0.2144 | 883 | 0 |
| TPM3--NTRK1 | 21 | 0 | 21.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 2028 | 1 | 0.01 | 11.00 | GT | 1.9329 | AG | 1.6895 | 0.2144 | 355 | 0 |
| FGFR3--BAIAP2L1 | 20 | 0 | 20.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 6 | 9 | 3.00 | 2.10 | GT | 1.8892 | AG | 1.8062 | 0.2042 | 1171 | 0 |
| SLC45A3--BRAF | 19 | 0 | 19.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 1 | 331 | 10.00 | 0.06 | GT | 1.5628 | AG | 1.7465 | 0.194 | 2599 | 0 |
| KIF5B--RET | 18 | 0 | 18.00 | 0.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 285 | 0 | 0.07 | 19.00 | GT | 1.9656 | AG | 1.9656 | 0.1838 | 3178 | 0 |
| LMNA--NTRK1 | 16 | 0 | 16.00 | 0.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 452 | 8 | 0.04 | 1.89 | GT | 1.7465 | AG | 1.5058 | 0.1634 | 947 | 0 |
| PAX8--PPARG | 15 | 0 | 15.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 13 | 3 | 1.14 | 4.00 | GT | 1.8295 | AG | 1.9329 | 0.1532 | 1923 | 0 |
| CD74--ROS1 | 14 | 0 | 14.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 7517 | 0 | 0.00 | 15.00 | GT | 1.7819 | AG | 1.7465 | 0.1429 | 2407 | 0 |
| SLC34A2--ROS1 | 8 | 0 | 8.00 | 0.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 3 | 0 | 2.25 | 9.00 | GT | 1.8892 | AG | 1.7465 | 0.0817 | 999 | 0 |
| EGFR--AC069287.1 | 3 | 0 | 3.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | AC069287.1^ENSG00000254468.2 | 45121 | chr11:121426:- | ONLY_REF_SPLICE | YES | 0 | 25 | 4.00 | 0.15 | GT | 1.8892 | AG | 1.9899 | 0.0306 | 1220 | 0 |
| ELK3--MTMR2 | 3 | 0 | 3.00 | 0.00 | ELK3^ENSG00000111145.8 | 5801 | chr12:96223773:+ | MTMR2^ENSG00000087053.20 | 29904 | chr11:95865676:- | ONLY_REF_SPLICE | YES | 11 | 132 | 0.33 | 0.03 | GT | 1.8323 | AG | 1.8892 | 0.0306 | 1285 | 0 |
| ADAM9--ERICH1 | 2 | 0 | 2.00 | 0.00 | ADAM9^ENSG00000168615.13 | 1407 | chr8:38997160:+ | ERICH1^ENSG00000104714.14 | 44421 | chr8:716007:- | ONLY_REF_SPLICE | YES | 168 | 82 | 0.02 | 0.04 | GT | 1.5329 | AG | 1.5058 | 0.0204 | 1774 | 0 |
| EML4--ALK | 2 | 0 | 2.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 159 | 4 | 0.02 | 0.60 | GT | 1.6895 | AG | 1.9086 | 0.0204 | 1550 | 0 |
| SLC29A1--OGT | 2 | 0 | 2.00 | 0.00 | SLC29A1^ENSG00000112759.19 | 10412 | chr6:44232428:+ | OGT^ENSG00000147162.14 | 23632 | chrX:71547907:+ | ONLY_REF_SPLICE | YES | 220 | 702 | 0.01 | 0.00 | GT | 1.8323 | AG | 1.7819 | 0.0204 | 807 | 0 |
| SPECC1L--CYFIP2 | 2 | 0 | 2.00 | 0.00 | SPECC1L^ENSG00000100014.20 | 6810 | chr22:24313466:+ | CYFIP2^ENSG00000055163.20 | 43825 | chr5:157307761:+ | ONLY_REF_SPLICE | YES | 152 | 459 | 0.02 | 0.01 | GT | 1.8892 | AG | 1.6895 | 0.0204 | 1800 | 0 |
| TRIM5--NSD1 | 2 | 0 | 2.00 | 0.00 | TRIM5^ENSG00000132256.19 | 11007 | chr11:5678204:- | NSD1^ENSG00000165671.21 | 25807 | chr5:177191884:+ | ONLY_REF_SPLICE | YES | 242 | 306 | 0.01 | 0.01 | GT | 1.9656 | AG | 1.8295 | 0.0204 | 1190 | 0 |
| YY1AP1--SEC24C | 2 | 0 | 2.00 | 0.00 | YY1AP1^ENSG00000163374.20 | 10098 | chr1:155670320:- | SEC24C^ENSG00000176986.16 | 21667 | chr10:73759622:+ | ONLY_REF_SPLICE | YES | 248 | 296 | 0.01 | 0.01 | GT | 1.7819 | AG | 1.8256 | 0.0204 | 203 | 0 |
23 rows