File Info
- Filename
- V4_0001_RNA_0005_23H5VFLT4_s22.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23H5VFLT4/nfcore_rnafusion_100M__5f1fa79--20260304-093157/fusioninspector/V4_0001_RNA_0005_23H5VFLT4_s22.FusionInspector.fusions.abridged.tsv
- Size
- 4.5 KB
- Workflow Run
- dev_rna_exp0001_5f1fa79
- Published
- Mar 04, 2026 3:32 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 212 | 0 | 212.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 11 | 659 | 17.75 | 0.32 | GT | 1.8892 | AG | 1.7819 | 2.1646 | 627 | 0 |
| TMPRSS2--ERG | 150 | 0 | 150.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 5 | 151.00 | 25.17 | GT | 1.6895 | AG | 1.9219 | 1.5316 | 1104 | 0 |
| LMNA--NTRK1 | 80 | 1 | 80.00 | 0.92 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 701 | 16 | 0.12 | 4.82 | GT | 1.7465 | AG | 1.5058 | 0.8262 | 947 | 0 |
| LMNA--NTRK1 | 7 | 1 | 7.00 | 0.08 | LMNA^ENSG00000160789.23 | 17678 | chr1:156130718:+ | NTRK1^ENSG00000198400.13 | 33571 | chr1:156865211:+ | INCL_NON_REF_SPLICE | NO | 813 | 1 | 0.01 | 4.50 | TG | 1.9656 | TT | 1.6895 | 0.0723 | 420 | 0 |
| FGFR3--BAIAP2L1 | 56 | 0 | 56.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 11 | 17 | 4.75 | 3.17 | GT | 1.8892 | AG | 1.8062 | 0.5718 | 1171 | 0 |
| CD74--ROS1 | 40 | 0 | 40.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 11527 | 0 | 0.00 | 41.00 | GT | 1.7819 | AG | 1.7465 | 0.4084 | 2407 | 0 |
| SLC34A2--ROS1 | 38 | 0 | 38.00 | 0.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 0 | 39.00 | 39.00 | GT | 1.8892 | AG | 1.7465 | 0.388 | 999 | 0 |
| CCDC6--RET | 36 | 0 | 36.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 606 | 21 | 0.06 | 1.68 | GT | 1.8892 | AG | 1.8323 | 0.3676 | 2092 | 0 |
| KIF5B--RET | 36 | 0 | 36.00 | 0.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 375 | 1 | 0.10 | 18.50 | GT | 1.9656 | AG | 1.9656 | 0.3676 | 3178 | 0 |
| TPM3--NTRK1 | 34 | 0 | 34.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 2752 | 1 | 0.01 | 17.50 | GT | 1.9329 | AG | 1.6895 | 0.3472 | 355 | 0 |
| NCOA4--RET | 30 | 0 | 30.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 746 | 21 | 0.04 | 1.41 | GT | 1.9086 | AG | 1.8323 | 0.3063 | 5144 | 0 |
| ETV6--NTRK3 | 29 | 0 | 29.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 990 | 1 | 0.03 | 15.00 | GT | 1.7819 | AG | 1.9656 | 0.2961 | 1252 | 0 |
| EGFR--AC069287.1 | 24 | 0 | 24.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | AC069287.1^ENSG00000254468.2 | 45121 | chr11:121426:- | ONLY_REF_SPLICE | YES | 1 | 18 | 12.50 | 1.32 | GT | 1.8892 | AG | 1.9899 | 0.2451 | 1220 | 0 |
| EML4--ALK | 19 | 0 | 19.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 198 | 18 | 0.10 | 1.05 | GT | 1.6895 | AG | 1.9086 | 0.194 | 1550 | 0 |
| PAX8--PPARG | 14 | 0 | 14.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 25 | 4 | 0.58 | 3.00 | GT | 1.8295 | AG | 1.9329 | 0.1429 | 1923 | 0 |
| SLC45A3--BRAF | 14 | 0 | 14.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 1 | 640 | 7.50 | 0.02 | GT | 1.5628 | AG | 1.7465 | 0.1429 | 2599 | 0 |
| TFG--NTRK1 | 13 | 0 | 13.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 387 | 1 | 0.04 | 7.00 | GT | 1.9329 | AG | 1.6895 | 0.1327 | 883 | 0 |
| LAT2--EIF4H | 2 | 0 | 2.00 | 0.00 | LAT2^ENSG00000086730.17 | 1034 | chr7:74199685:+ | EIF4H^ENSG00000106682.16 | 26332 | chr7:74194741:+ | ONLY_REF_SPLICE | YES | 0 | 954 | 3.00 | 0.00 | GT | 1.7465 | AG | 1.9656 | 0.0204 | 1133 | 0 |
| MALT1--RPRD1A | 1 | 0 | 1.00 | 0.00 | MALT1^ENSG00000172175.15 | 41388 | chr18:58671852:+ | RPRD1A^ENSG00000141425.18 | 132889 | chr18:36033837:- | ONLY_REF_SPLICE | YES | 709 | 317 | 0.00 | 0.01 | GT | 1.6402 | AG | 1.3996 | 0.0102 | 952 | 0 |
| MALT1--RPRD1A | 1 | 0 | 1.00 | 0.00 | MALT1^ENSG00000172175.15 | 66023 | chr18:58696487:+ | RPRD1A^ENSG00000141425.18 | 139611 | chr18:35993300:- | ONLY_REF_SPLICE | YES | 227 | 123 | 0.01 | 0.02 | GT | 1.2419 | AG | 1.7819 | 0.0102 | 430 | 0 |
| PCMTD1--MCPH1 | 1 | 0 | 1.00 | 0.00 | PCMTD1^ENSG00000168300.14 | 3802 | chr8:51860845:- | MCPH1^ENSG00000147316.13 | 31241 | chr8:6455143:+ | ONLY_REF_SPLICE | YES | 187 | 77 | 0.01 | 0.03 | GT | 1.7465 | AG | 1.7465 | 0.0102 | 1816 | 0 |
| PCMTD1--MCPH1 | 1 | 0 | 1.00 | 0.00 | PCMTD1^ENSG00000168300.14 | 1257 | chr8:51898930:- | MCPH1^ENSG00000147316.13 | 32679 | chr8:6477594:+ | ONLY_REF_SPLICE | YES | 221 | 86 | 0.01 | 0.02 | GT | 1.6402 | AG | 1.6402 | 0.0102 | 4043 | 0 |
23 rows