File Info
- Filename
- V4_0001_RNA_0005_23H5VFLT4_s26.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23H5VFLT4/nfcore_rnafusion_100M__5f1fa79--20260304-093157/fusioninspector/V4_0001_RNA_0005_23H5VFLT4_s26.FusionInspector.fusions.abridged.tsv
- Size
- 5.3 KB
- Workflow Run
- dev_rna_exp0001_5f1fa79
- Published
- Mar 04, 2026 3:34 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1690 | 3 | 1690.00 | 3.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 40 | 958 | 41.32 | 1.77 | GT | 1.8892 | AG | 1.7819 | 17.3484 | 627 | 0 |
| TMPRSS2--ERG | 959 | 0 | 959.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 4 | 37 | 192.00 | 25.26 | GT | 1.6895 | AG | 1.9219 | 9.827 | 1104 | 0 |
| FGFR3--BAIAP2L1 | 402 | 3 | 402.00 | 3.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 40 | 31 | 9.90 | 12.69 | GT | 1.8892 | AG | 1.8062 | 4.1501 | 1171 | 0 |
| LMNA--NTRK1 | 388 | 3 | 388.00 | 3.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1863 | 85 | 0.21 | 4.56 | GT | 1.7465 | AG | 1.5058 | 4.0066 | 947 | 0 |
| TPM3--NTRK1 | 382 | 2 | 382.00 | 2.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3302 | 12 | 0.12 | 29.62 | GT | 1.9329 | AG | 1.6895 | 3.9349 | 355 | 0 |
| NCOA4--RET | 295 | 2 | 295.00 | 2.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1124 | 182 | 0.26 | 1.63 | GT | 1.9086 | AG | 1.8323 | 3.0434 | 5144 | 0 |
| CCDC6--RET | 289 | 2 | 289.00 | 2.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 810 | 182 | 0.36 | 1.60 | GT | 1.8892 | AG | 1.8323 | 2.9819 | 2092 | 0 |
| KIF5B--RET | 277 | 2 | 277.00 | 2.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 571 | 6 | 0.49 | 40.00 | GT | 1.9656 | AG | 1.9656 | 2.859 | 3178 | 0 |
| KIF5B--RET | 3 | 0 | 3.00 | 0.00 | KIF5B^ENSG00000170759.11 | 19970 | chr10:32017150:- | RET^ENSG00000165731.20 | 38827 | chr10:43114475:+ | INCL_NON_REF_SPLICE | YES | 591 | 0 | 0.01 | 4.00 | CA | 1.9656 | CC | 1.9656 | 0.0307 | 3187 | 0 |
| ETV6--NTRK3 | 272 | 1 | 272.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1023 | 4 | 0.27 | 54.80 | GT | 1.7819 | AG | 1.9656 | 2.7974 | 1252 | 0 |
| SLC34A2--ROS1 | 260 | 6 | 260.00 | 6.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 26 | 267.00 | 9.89 | GT | 1.8892 | AG | 1.7465 | 2.7258 | 999 | 0 |
| CD74--ROS1 | 205 | 3 | 205.00 | 2.93 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 12050 | 34 | 0.02 | 5.97 | GT | 1.7819 | AG | 1.7465 | 2.1307 | 2407 | 0 |
| CD74--ROS1 | 5 | 3 | 5.00 | 0.07 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 12652 | chr6:117425920:- | INCL_NON_REF_SPLICE | NO | 12050 | 0 | 0.00 | 9.00 | GT | 1.7819 | TT | 1.9656 | 0.0519 | 3298 | 0 |
| EML4--ALK | 178 | 0 | 178.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 200 | 19 | 0.89 | 8.95 | GT | 1.6895 | AG | 1.9086 | 1.824 | 1550 | 0 |
| TFG--NTRK1 | 125 | 1 | 125.00 | 1.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 665 | 12 | 0.19 | 9.77 | GT | 1.9329 | AG | 1.6895 | 1.2911 | 883 | 0 |
| SLC45A3--BRAF | 124 | 0 | 124.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 529 | 125.00 | 0.24 | GT | 1.5628 | AG | 1.7465 | 1.2706 | 2599 | 0 |
| PAX8--PPARG | 117 | 0 | 117.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 25 | 7 | 4.54 | 14.75 | GT | 1.8295 | AG | 1.9329 | 1.1989 | 1923 | 0 |
| EGFR--SEPTIN14 | 110 | 1 | 110.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 1 | 4 | 56.00 | 22.40 | GT | 1.8892 | AG | 1.9899 | 1.1374 | 658 | 0 |
| PAPOLA--TPM3 | 13 | 0 | 13.00 | 0.00 | PAPOLA^ENSG00000090060.18 | 2168 | chr14:96502600:+ | TPM3^ENSG00000143549.21 | 57001 | chr1:154157721:- | ONLY_REF_SPLICE | YES | 253 | 3546 | 0.06 | 0.00 | GT | 1.9219 | AG | 1.7232 | 0.1332 | 2337 | 0 |
| IPCEF1--TCF12 | 3 | 0 | 3.00 | 0.00 | IPCEF1^ENSG00000074706.13 | 14861 | chr6:154199668:- | TCF12^ENSG00000140262.18 | 30078 | chr15:57063750:+ | ONLY_REF_SPLICE | YES | 328 | 767 | 0.01 | 0.01 | GT | 1.7968 | AG | 1.5656 | 0.0307 | 3487 | 0 |
| NDUFB2--MROH1 | 3 | 0 | 3.00 | 0.00 | NDUFB2^ENSG00000090266.13 | 2961 | chr7:140696842:+ | MROH1^ENSG00000179832.17 | 20298 | chr8:144168295:+ | ONLY_REF_SPLICE | YES | 1017 | 280 | 0.00 | 0.01 | GT | 1.8892 | AG | 1.7232 | 0.0307 | 188 | 0 |
| MYO19--FERMT3 | 2 | 0 | 2.00 | 0.00 | MYO19^ENSG00000278259.5 | 9228 | chr17:36525228:- | FERMT3^ENSG00000149781.13 | 39728 | chr11:64223048:+ | ONLY_REF_SPLICE | YES | 243 | 981 | 0.01 | 0.00 | GT | 1.7465 | AG | 1.8892 | 0.0205 | 130 | 0 |
| RAD54B--LYN | 2 | 0 | 2.00 | 0.00 | RAD54B^ENSG00000197275.14 | 3894 | chr8:94458268:- | LYN^ENSG00000254087.8 | 34606 | chr8:55966715:+ | ONLY_REF_SPLICE | YES | 66 | 667 | 0.04 | 0.00 | GT | 1.7819 | AG | 1.7465 | 0.0205 | 2829 | 0 |
| RPS6KA1--RBCK1 | 2 | 0 | 2.00 | 0.00 | RPS6KA1^ENSG00000117676.14 | 8219 | chr1:26547270:+ | RBCK1^ENSG00000125826.21 | 38484 | chr20:430350:+ | ONLY_REF_SPLICE | YES | 573 | 611 | 0.01 | 0.00 | GT | 1.7819 | AG | 1.5656 | 0.0205 | 224 | 0 |
| SNX29--CLEC16A | 2 | 0 | 2.00 | 0.00 | SNX29^ENSG00000048471.14 | 23845 | chr16:12356279:+ | CLEC16A^ENSG00000038532.16 | 44763 | chr16:10969161:+ | ONLY_REF_SPLICE | YES | 525 | 134 | 0.01 | 0.02 | GT | 1.8323 | AG | 1.7465 | 0.0205 | 3465 | 0 |
| ZDHHC20--SELENOF | 2 | 0 | 2.00 | 0.00 | ZDHHC20^ENSG00000180776.16 | 1317 | chr13:21459054:- | SELENOF^ENSG00000183291.17 | 29893 | chr1:86863605:- | ONLY_REF_SPLICE | YES | 422 | 786 | 0.01 | 0.00 | GT | 1.7819 | AG | 1.8892 | 0.0205 | 6625 | 0 |
27 rows