File Info
- Filename
- V4_0001_RNA_0005_23H5VFLT4_s02.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23H5VFLT4/nfcore_rnafusion_100M__5f1fa79--20260304-093157/fusioninspector/V4_0001_RNA_0005_23H5VFLT4_s02.FusionInspector.fusions.abridged.tsv
- Size
- 5.9 KB
- Workflow Run
- dev_rna_exp0001_5f1fa79
- Published
- Mar 04, 2026 3:35 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1931 | 4 | 1931.00 | 4.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 47 | 1385 | 40.33 | 1.40 | GT | 1.8892 | AG | 1.7819 | 19.7291 | 627 | 0 |
| FGFR3--TACC3 | 3 | 3 | 3.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9859 | chr4:1806915:+ | TACC3^ENSG00000013810.20 | 27591 | chr4:1739703:+ | INCL_NON_REF_SPLICE | YES | 216 | 1422 | 0.03 | 0.00 | TA | 1.8062 | GG | 1.7819 | 0.0306 | 636 | 0 |
| TMPRSS2--ERG | 1245 | 0 | 1245.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 4 | 75 | 249.20 | 16.39 | GT | 1.6895 | AG | 1.9219 | 12.6939 | 1104 | 0 |
| TMPRSS2--ERG | 6 | 0 | 6.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4646 | chr21:41508087:- | ERG^ENSG00000157554.19 | 28748 | chr21:38584948:- | INCL_NON_REF_SPLICE | YES | 4 | 0 | 1.40 | 7.00 | CG | 1.5628 | TT | 1.9899 | 0.0612 | 1101 | 0 |
| TMPRSS2--ERG | 4 | 0 | 4.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4656 | chr21:41508077:- | ERG^ENSG00000157554.19 | 28756 | chr21:38584940:- | INCL_NON_REF_SPLICE | YES | 0 | 84 | 5.00 | 0.06 | GC | 1.6729 | AT | 1.9656 | 0.0408 | 1109 | 0 |
| LMNA--NTRK1 | 613 | 6 | 613.00 | 6.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2270 | 138 | 0.27 | 4.46 | GT | 1.7465 | AG | 1.5058 | 6.3113 | 947 | 0 |
| FGFR3--BAIAP2L1 | 509 | 1 | 509.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 49 | 23 | 10.22 | 21.29 | GT | 1.8892 | AG | 1.8062 | 5.1999 | 1171 | 0 |
| ETV6--NTRK3 | 496 | 0 | 496.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1306 | 10 | 0.38 | 45.18 | GT | 1.7819 | AG | 1.9656 | 5.0572 | 1252 | 0 |
| TPM3--NTRK1 | 476 | 0 | 476.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 4404 | 17 | 0.11 | 26.50 | GT | 1.9329 | AG | 1.6895 | 4.8533 | 355 | 0 |
| NCOA4--RET | 426 | 2 | 426.00 | 2.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1406 | 223 | 0.30 | 1.92 | GT | 1.9086 | AG | 1.8323 | 4.3639 | 5144 | 0 |
| CCDC6--RET | 360 | 2 | 360.00 | 2.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1039 | 223 | 0.35 | 1.62 | GT | 1.8892 | AG | 1.8323 | 3.6909 | 2092 | 0 |
| SLC34A2--ROS1 | 349 | 4 | 349.00 | 3.97 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 29 | 354.00 | 11.80 | GT | 1.8892 | AG | 1.7465 | 3.5989 | 999 | 0 |
| SLC34A2--ROS1 | 4 | 3 | 4.00 | 0.03 | SLC34A2^ENSG00000157765.13 | 6088 | chr4:25664334:+ | ROS1^ENSG00000047936.11 | 58028 | chr6:117324412:- | INCL_NON_REF_SPLICE | YES | 0 | 44 | 8.00 | 0.18 | GA | 1.7465 | TG | 1.8892 | 0.0411 | 1002 | 0 |
| KIF5B--RET | 311 | 4 | 311.00 | 4.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 651 | 3 | 0.48 | 79.00 | GT | 1.9656 | AG | 1.9656 | 3.2117 | 3178 | 0 |
| CD74--ROS1 | 246 | 5 | 246.00 | 4.94 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 14822 | 28 | 0.02 | 8.69 | GT | 1.7819 | AG | 1.7465 | 2.5586 | 2407 | 0 |
| CD74--ROS1 | 3 | 5 | 3.00 | 0.06 | CD74^ENSG00000019582.16 | 4987 | chr5:150404683:- | ROS1^ENSG00000047936.11 | 48729 | chr6:117324417:- | INCL_NON_REF_SPLICE | YES | 16321 | 0 | 0.00 | 9.00 | AA | 1.8295 | TT | 1.5301 | 0.0312 | 2405 | 0 |
| PAX8--PPARG | 193 | 0 | 193.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 39 | 5 | 4.85 | 32.33 | GT | 1.8295 | AG | 1.9329 | 1.9678 | 1923 | 0 |
| EML4--ALK | 174 | 0 | 174.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 255 | 27 | 0.68 | 6.25 | GT | 1.6895 | AG | 1.9086 | 1.7741 | 1550 | 0 |
| SLC45A3--BRAF | 167 | 0 | 167.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 669 | 168.00 | 0.25 | GT | 1.5628 | AG | 1.7465 | 1.7027 | 2599 | 0 |
| TFG--NTRK1 | 109 | 0 | 109.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 799 | 17 | 0.14 | 6.11 | GT | 1.9329 | AG | 1.6895 | 1.1114 | 883 | 0 |
| EGFR--SEPTIN14 | 102 | 1 | 102.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 8 | 1 | 11.56 | 52.00 | GT | 1.8892 | AG | 1.9899 | 1.0502 | 658 | 0 |
| MRPS18A--ESCO1 | 15 | 0 | 15.00 | 0.00 | MRPS18A^ENSG00000096080.12 | 1124 | chr6:43687668:- | ESCO1^ENSG00000141446.11 | 11695 | chr18:21593488:- | ONLY_REF_SPLICE | YES | 361 | 9 | 0.04 | 1.60 | GT | 1.7232 | AG | 1.7819 | 0.1529 | 1001 | 0 |
| OR2T2--OR2T3 | 7 | 1 | 7.00 | 1.00 | OR2T2^ENSG00000196240.5 | 3499 | chr1:248449392:+ | OR2T3^ENSG00000196539.3 | 10432 | chr1:248473333:+ | INCL_NON_REF_SPLICE | YES | 5 | 0 | 1.50 | 9.00 | GT | 1.6402 | AG | 1.7819 | 0.0816 | 1197 | 0 |
| CYB561D2--QRICH1 | 4 | 0 | 4.00 | 0.00 | CYB561D2^ENSG00000114395.11 | 1716 | chr3:50351560:+ | QRICH1^ENSG00000198218.11 | 23321 | chr3:49033228:- | ONLY_REF_SPLICE | YES | 315 | 235 | 0.02 | 0.02 | GT | 1.7968 | AG | 1.9086 | 0.0408 | 480 | 0 |
| AC105105.1--MALT1 | 3 | 0 | 3.00 | 0.00 | AC105105.1^ENSG00000267257.1 | 2246 | chr18:58536660:+ | MALT1^ENSG00000172175.15 | 35537 | chr18:58659863:+ | INCL_NON_REF_SPLICE | YES | 302 | 8 | 0.01 | 0.44 | GT | 1.9086 | AG | 1.9086 | 0.0306 | 290 | 0 |
| AC105105.1--MALT1 | 3 | 0 | 3.00 | 0.00 | AC105105.1^ENSG00000267257.1 | 2246 | chr18:58536660:+ | MALT1^ENSG00000172175.15 | 56844 | chr18:58681170:+ | INCL_NON_REF_SPLICE | YES | 302 | 815 | 0.01 | 0.00 | GT | 1.9086 | AG | 1.9899 | 0.0306 | 227 | 0 |
| FNBP4--NUP160 | 3 | 0 | 3.00 | 0.00 | FNBP4^ENSG00000109920.13 | 2468 | chr11:47765270:- | NUP160^ENSG00000030066.13 | 29798 | chr11:47837623:- | ONLY_REF_SPLICE | YES | 298 | 306 | 0.01 | 0.01 | GT | 1.9219 | AG | 1.8323 | 0.0306 | 1265 | 0 |
| CCNJ--MARCHF8 | 2 | 0 | 2.00 | 0.00 | CCNJ^ENSG00000107443.16 | 2069 | chr10:96044462:+ | MARCHF8^ENSG00000165406.16 | 13928 | chr10:45553204:- | ONLY_REF_SPLICE | YES | 137 | 32 | 0.02 | 0.09 | GT | 1.9656 | AG | 1.8323 | 0.0204 | 925 | 0 |
| GMDS--DOCK11 | 2 | 0 | 2.00 | 0.00 | GMDS^ENSG00000112699.11 | 10844 | chr6:1930103:- | DOCK11^ENSG00000147251.16 | 39503 | chrX:118593214:+ | ONLY_REF_SPLICE | YES | 103 | 186 | 0.03 | 0.02 | GT | 1.7819 | AG | 1.7056 | 0.0204 | 2517 | 0 |
30 rows