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Filename
tih_rna_sample_00280_23H5VFLT4_s18.bam_stat.txt
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0003/B23H5VFLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/rseqc/tih_rna_sample_00280_23H5VFLT4_s18.bam_stat.txt
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861 bytes
Published
May 16, 2026 3:51 AM
#==================================================
#All numbers are READ count
#==================================================

Total records:                          655292656

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        58615916
Unmapped reads:                         3875527
mapq < mapq_cut (non-unique):           23559963

mapq >= mapq_cut (unique):              569241250
Read-1:                                 284790948
Read-2:                                 284450302
Reads map to '+':                       284632287
Reads map to '-':                       284608963
Non-splice reads:                       295417465
Splice reads:                           273823785
Reads mapped in proper pairs:           567308954
Proper-paired reads map to different chrom:0