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Filename
tih_rna_sample_00220_23H5VFLT4_s16.bam_stat.txt
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0003/B23H5VFLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/rseqc/tih_rna_sample_00220_23H5VFLT4_s16.bam_stat.txt
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861 bytes
Published
May 16, 2026 3:51 AM
#==================================================
#All numbers are READ count
#==================================================

Total records:                          646692276

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        49819156
Unmapped reads:                         3731454
mapq < mapq_cut (non-unique):           17532151

mapq >= mapq_cut (unique):              575609515
Read-1:                                 287979343
Read-2:                                 287630172
Reads map to '+':                       287853138
Reads map to '-':                       287756377
Non-splice reads:                       325231476
Splice reads:                           250378039
Reads mapped in proper pairs:           573381868
Proper-paired reads map to different chrom:0