File Info

Filename
tih_rna_sample_00403_23H5VFLT4_s29.bam_stat.txt
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0003/B23H5VFLT4/nfcore_rnafusion__2cae617--20260515-145204/QC/rseqc/tih_rna_sample_00403_23H5VFLT4_s29.bam_stat.txt
Size
861 bytes
Published
May 16, 2026 3:52 AM
#==================================================
#All numbers are READ count
#==================================================

Total records:                          643346501

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        46489977
Unmapped reads:                         3635033
mapq < mapq_cut (non-unique):           17093191

mapq >= mapq_cut (unique):              576128300
Read-1:                                 288231585
Read-2:                                 287896715
Reads map to '+':                       288081872
Reads map to '-':                       288046428
Non-splice reads:                       345744864
Splice reads:                           230383436
Reads mapped in proper pairs:           573717258
Proper-paired reads map to different chrom:0