File Info
- Filename
- FFPE_V4_0001_RNA_0001_23KMKGLT4_1.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0004/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-101508/fusioninspector/FFPE_V4_0001_RNA_0001_23KMKGLT4_1.FusionInspector.fusions.abridged.tsv
- Size
- 4.8 KB
- Workflow Run
- dev_rna_exp0004_5f1fa79
- Published
- Mar 04, 2026 5:13 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 2314 | 9 | 2314.00 | 8.99 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 58 | 2005 | 39.39 | 1.16 | GT | 1.8892 | AG | 1.7819 | 23.5647 | 627 | 0 |
| FGFR3--TACC3 | 3 | 9 | 3.00 | 0.01 | FGFR3^ENSG00000068078.20 | 9880 | chr4:1806936:+ | TACC3^ENSG00000013810.20 | 27593 | chr4:1739705:+ | INCL_NON_REF_SPLICE | YES | 7 | 2059 | 1.62 | 0.01 | GA | 1.8892 | TA | 1.5219 | 0.0305 | 623 | 0 |
| TMPRSS2--ERG | 1526 | 0 | 1526.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 7 | 66 | 190.88 | 22.79 | GT | 1.6895 | AG | 1.9219 | 15.4799 | 1104 | 0 |
| TMPRSS2--ERG | 3 | 0 | 3.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4654 | chr21:41508079:- | ERG^ENSG00000157554.19 | 28759 | chr21:38584937:- | INCL_NON_REF_SPLICE | YES | 0 | 114 | 4.00 | 0.03 | GA | 1.7232 | CC | 1.9329 | 0.0304 | 1112 | 0 |
| ETV6--NTRK3 | 682 | 1 | 682.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1980 | 13 | 0.35 | 48.86 | GT | 1.7819 | AG | 1.9656 | 6.9284 | 1252 | 0 |
| LMNA--NTRK1 | 668 | 7 | 668.00 | 7.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2834 | 222 | 0.24 | 3.03 | GT | 1.7465 | AG | 1.5058 | 6.8473 | 947 | 0 |
| FGFR3--BAIAP2L1 | 640 | 2 | 640.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 60 | 24 | 10.54 | 25.72 | GT | 1.8892 | AG | 1.8062 | 6.5125 | 1171 | 0 |
| TPM3--NTRK1 | 558 | 3 | 558.00 | 3.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 5450 | 23 | 0.10 | 23.42 | GT | 1.9329 | AG | 1.6895 | 5.6908 | 355 | 0 |
| CCDC6--RET | 458 | 1 | 458.00 | 1.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1401 | 404 | 0.33 | 1.14 | GT | 1.8892 | AG | 1.8323 | 4.6561 | 2092 | 0 |
| NCOA4--RET | 455 | 2 | 455.00 | 2.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1882 | 404 | 0.24 | 1.13 | GT | 1.9086 | AG | 1.8323 | 4.6359 | 5144 | 0 |
| KIF5B--RET | 439 | 7 | 439.00 | 7.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 953 | 12 | 0.47 | 34.38 | GT | 1.9656 | AG | 1.9656 | 4.5243 | 3178 | 0 |
| SLC34A2--ROS1 | 416 | 10 | 416.00 | 10.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 25 | 427.00 | 16.42 | GT | 1.8892 | AG | 1.7465 | 4.3213 | 999 | 0 |
| CD74--ROS1 | 402 | 3 | 402.00 | 3.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 20351 | 26 | 0.02 | 15.04 | GT | 1.7819 | AG | 1.7465 | 4.1083 | 2407 | 0 |
| EML4--ALK | 310 | 0 | 310.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 384 | 25 | 0.81 | 11.96 | GT | 1.6895 | AG | 1.9086 | 3.1447 | 1550 | 0 |
| PAX8--PPARG | 217 | 0 | 217.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 61 | 1 | 3.52 | 109.00 | GT | 1.8295 | AG | 1.9329 | 2.2013 | 1923 | 0 |
| TFG--NTRK1 | 203 | 0 | 203.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 1285 | 23 | 0.16 | 8.50 | GT | 1.9329 | AG | 1.6895 | 2.0593 | 883 | 0 |
| SLC45A3--BRAF | 201 | 0 | 201.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 953 | 202.00 | 0.21 | GT | 1.5628 | AG | 1.7465 | 2.039 | 2599 | 0 |
| EGFR--SEPTIN14 | 163 | 1 | 163.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 2 | 1 | 55.00 | 82.50 | GT | 1.8892 | AG | 1.9899 | 1.6636 | 658 | 0 |
| AC105105.1--MALT1 | 7 | 0 | 7.00 | 0.00 | AC105105.1^ENSG00000267257.1 | 2246 | chr18:58536660:+ | MALT1^ENSG00000172175.15 | 35537 | chr18:58659863:+ | INCL_NON_REF_SPLICE | YES | 334 | 2 | 0.02 | 2.67 | GT | 1.9086 | AG | 1.9086 | 0.071 | 290 | 0 |
| AC105105.1--MALT1 | 4 | 0 | 4.00 | 0.00 | AC105105.1^ENSG00000267257.1 | 2246 | chr18:58536660:+ | MALT1^ENSG00000172175.15 | 56844 | chr18:58681170:+ | INCL_NON_REF_SPLICE | YES | 334 | 1105 | 0.01 | 0.00 | GT | 1.9086 | AG | 1.9899 | 0.0406 | 227 | 0 |
| AC105105.1--MALT1 | 3 | 0 | 3.00 | 0.00 | AC105105.1^ENSG00000267257.1 | 2246 | chr18:58536660:+ | MALT1^ENSG00000172175.15 | 34184 | chr18:58658510:+ | INCL_NON_REF_SPLICE | YES | 334 | 0 | 0.01 | 4.00 | GT | 1.9086 | AG | 1.9329 | 0.0304 | 828 | 0 |
| TPTE2--MRPS31P2 | 5 | 0 | 5.00 | 0.00 | TPTE2^ENSG00000132958.17 | 7180 | chr13:19475573:- | MRPS31P2^ENSG00000232894.1 | 24910 | chr13:19570288:- | ONLY_REF_SPLICE | YES | 26 | 0 | 0.22 | 6.00 | GT | 1.8295 | AG | 1.9656 | 0.0507 | 4299 | 0 |
| CCNJ--PBX3 | 2 | 0 | 2.00 | 0.00 | CCNJ^ENSG00000107443.16 | 2069 | chr10:96044462:+ | PBX3^ENSG00000167081.18 | 22314 | chr9:125915686:+ | ONLY_REF_SPLICE | YES | 136 | 607 | 0.02 | 0.00 | GT | 1.9656 | AG | 1.9899 | 0.0203 | 1173 | 0 |
24 rows