File Info
- Filename
- FFPE_HD835_01_RNA_0001_23LGNLLT4_3.starfusion.starfusion.fusion_predictions.filtered.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0005/A23LGNLLT4/nfcore_rnafusion__2cae617--20260515-145204/starfusion/FFPE_HD835_01_RNA_0001_23LGNLLT4_3.starfusion.starfusion.fusion_predictions.filtered.tsv
- Size
- 1.0 MB
- Workflow Run
- dev_rna_exp0005_2cae617
- Published
- May 16, 2026 6:04 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | SpliceType | LeftGene | LeftBreakpoint | RightGene | RightBreakpoint | JunctionReads | SpanningFrags | LargeAnchorSupport | FFPM | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | annots | breakpoint_ID | blacklisted | blacklist_reasons | aih_curated_reason | CALL | filter_reason | FILTER | total_reads | |||||||
| PANK2--MAVS | 1244 | 36 | 1244.0 | 36.0 | ONLY_REF_SPLICE | PANK2^ENSG00000125779.23 | chr20:3889728:+ | MAVS^ENSG00000088888.18 | chr20:3854558:+ | 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LLT4_3@LH00166:237:23LGNLLT4:2:1361:29590:22411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1361:37033:11117,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1361:41863:20323,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1362:34412:17114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1362:43780:1560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1362:45317:26306,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1363:26330:9842,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1364:33991:8791,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1365:24259:23209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1365:2489:21374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1368:28603:22495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:17568:10949,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:21371:5316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1372:21338:29641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1372:38489:10052,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1374:2286:11551,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1375:2391:26923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1375:37470:12210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1375:37801:23658,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1376:21201:17661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1377:30205:1084,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:2319:13625,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:26734:21612,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1379:19033:21416,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1380:31354:29053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1383:38651:3634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:41749:9814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:4632:12420,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:4139:12742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:23215:2766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:36572:13401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1388:35124:28856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1390:19146:16848,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1391:27341:3999,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:11032:3242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:43003:21990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:50891:15447,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:9009:7109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1396:15967:4111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1397:2610:26685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1402:38991:27427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1403:29372:10430,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1404:13038:26250,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1404:16314:11439,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:38408:14620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:37397:9562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:40665:10150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:10635:15755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:26200:29571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:32365:17324,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1410:22568:8483,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1413:7998:6759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:20723:7502,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:40560:16610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:9276:29123,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1417:36847:23546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1418:33959:15068,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:38926:2990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:6105:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:11104:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:17479:27974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:5636:8945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:4624:29165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:6671:29179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1424:15311:13345,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT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T4_3@LH00166:237:23LGNLLT4:3:1136:6631:22046,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:21290:14536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:40835:25942,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1143:36693:12294,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1145:15724:12826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1148:28190:9954,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:38578:27077,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1152:24267:10500,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1156:19389:23686,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:44589:28352,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:16484:12630,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:17309:1701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1159:10158:22747,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1164:14793:15279,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1164:25319:10080,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:15287:26138,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:8977:18459,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:18984:16596,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1174:15077:21710,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1176:20974:5582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:17576:23041,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:28255:23910,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1179:21678:27175,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1179:37785:15951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1179:47526:6843,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1179:8443:25325,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1181:46806:22411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1186:13151:1504,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1186:41677:2121,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1187:37429:26488,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1191:16598:28632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1192:23401:13149,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1192:47323:13555,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:9810:5554,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:6679:16273,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1195:10530:24344,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1195:23086:17282,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1195:4697:7936,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1196:11533:1757,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1196:32583:2065,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1197:5223:6157,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1201:11371:9491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1202:24129:12224,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1202:30520:14942,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:10247:2107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1204:5029:6381,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1205:40406:23966,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1206:24995:11705,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1206:26953:17394,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:8961:9716,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1208:33910:19748,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1211:13661:8413,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1212:30367:17983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1212:33773:6283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1213:51595:25017,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:5587:22565,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1219:23102:9043,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:31402:9155,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1223:49524:17843,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1224:37543:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1224:48076:9814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:40131:20351,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1234:21403:4363,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1234:27317:18109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1234:31265:23209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4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1_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1214:24194:13457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:35140:13891,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1217:3006:28856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1220:9325:26769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1225:19283:16301,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1226:15691:5120,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1229:28595:22929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:24372:2976,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:34290:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1240:3912:5400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1242:40617:22929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1244:18887:28394,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1245:47639:24246,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1249:42655:19118,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1249:8006:23083,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1251:24283:11846,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1253:4584:4769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1258:13070:2625,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1258:33190:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1259:37041:17436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1260:44104:12798,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1261:27802:14746,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1261:44613:21752,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:3791:14914,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1267:38966:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1267:6186:7516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1268:13839:9562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1268:1542:27553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1268:9535:15923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1270:39468:23602,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1273:21759:16189,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1274:46490:19678,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1281:17107:24471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1282:7601:28296,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1283:12731:24961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1286:39929:19160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1291:36774:23420,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1291:9155:22775,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1294:33740:16820,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1297:25456:2443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:30448:10108,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:43723:19426,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1305:25351:26194,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1306:38918:23181,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:22972:3971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:16355:2541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1316:17196:18964,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1317:38796:21458,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1318:10797:6563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1319:14033:27918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1320:13782:11341,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1322:9980:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1324:24663:3368,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1325:3532:5946,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1325:41555:6339,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1327:11735:16680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:14777:10066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:20837:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:40487:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1331:30674:8567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1332:25213:15699,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1332:32373:6521,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1336:4503:3144,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1337:13604:28520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1337:21039:13597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1339:42405:28184,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1340:34816:2037,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1345:26556:2864 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1179:33109:4769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:20295:14186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:37543:8777,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1390:44006:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:1154:25564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:18652:13219,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1472:15683:19202,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2189:9389:6815,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:20982:9968,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2222:14599:3620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2240:32624:14858,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:50341:6283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2444:20683:21276,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2462:18677:28086,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1118:24655:12462,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:12682:24373,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:12520:26250,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:18191:10795,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1357:30084:9057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1389:12844:22579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1423:30294:11019,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:49087:10248,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1480:10579:21822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:12277:9435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:5102:7908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2288:21937:15965,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2345:33870:23294,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2411:47501:16582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2419:30771:11874,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2485:2804:23097,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2487:19089:22971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1161:2788:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1161:2804:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1254:38764:21178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1331:13192:4489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1333:1890:12070 | YES_LDAS | 4.3306 | GT | 1.5656 | AG | 1.5628 | "[""Klijn_CellLines"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr20:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[12716]""]" | chr20:3889728-chr20:3854558 | False | 1 | PASS | 1280 | ||||||||||
| TCF7L2--AL158212.1 | 723 | 30 | 722.99 | 23.3 | ONLY_REF_SPLICE | TCF7L2^ENSG00000148737.17 | chr10:113040126:+ | AL158212.1^ENSG00000225292.2 | chr10:112888735:+ | 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4_3@LH00166:237:23LGNLLT4:2:1216:36272:17759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:43837:3312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:34832:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1224:33902:23209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1225:38562:12981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1227:26540:28955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:1477:20771,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:38546:3312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:50648:18025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:19122:27371,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:5369:4363,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1243:6801:1799,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:42243:13051,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:26289:14172,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1248:12286:24387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:51854:7053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:12536:12882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:31710:25746,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1257:23053:3410,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:45891:13737,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:47145:4531,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1259:18515:29599,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:14308:25395,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:2092:22845,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1267:38780:28436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1268:26783:4349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1272:30197:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:52032:12462,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:42979:9814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1284:30140:13443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1284:47218:7095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:34606:19216,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:48084:16049,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:6922:10444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1287:36912:7404,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1288:23798:15853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1290:30067:11579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1298:28377:28016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1302:44613:12840,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1306:16023:9646,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1307:4641:11033,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1308:23668:20954,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:19291:8945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:30982:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1318:31977:1939,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1319:33117:13163,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1319:40722:3662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:48051:6577,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1324:49224:6002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:10093:21710,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:42971:2373,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:7051:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1326:45770:1645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:19955:25283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1332:9915:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1334:46288:16890,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:45924:6787,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:9147:6367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:20715:19174,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1341:21565:21850,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1344:37065:26867,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1344:6089:16848,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:51643:4307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:15052:2107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:40803:25970,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1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00166:237:23LGNLLT4:3:2492:4236:8819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2494:12795:22747,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2496:21209:8791,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:5166:16736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1106:30334:12630,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1108:50430:3046,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1111:1316:9141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1119:17164:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1120:28999:23434,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1120:43610:8833,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1121:29857:18978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:16064:6521,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:28563:14662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:40536:23069,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1128:38238:3312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1129:16306:13863,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1132:44338:25676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:48836:2303,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1135:29954:18950,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1137:42623:11719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1143:50511:13807,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1145:17916:8216,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1146:11784:13821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:48569:2485,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1152:40948:27932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1159:12091:28786,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:50665:11299,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1163:41563:7334,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1164:41798:25367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1178:2715:16273,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1187:32672:6030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1187:46628:15853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1189:48715:9211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1194:18385:27806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:23531:20771,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1198:38254:23490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1202:33667:26418,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1210:30148:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1212:20020:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1214:37955:16385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1218:1218:14186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:12925:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1225:25084:17633,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1227:33287:22565,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1229:42914:16512,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1235:8208:3340,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1240:45544:13079,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1247:17293:11986,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1247:23207:2555,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1250:16266:27637,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1256:37235:12672,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1261:32244:29557,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1266:38149:14536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1267:48310:25662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1268:29574:8819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1269:18418:3284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:22382:6311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1273:44047:19819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1278:43084:13723,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:7877:28492,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1313:25755:4923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1319:42874:21598,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1320:45301:16357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1327:42097:12294,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:24817:26418,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1333:40617:19342,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1336:35156:22691,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1340:6428:14073,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1341:45131:14101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1343:29930:29221 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1117:21856:7362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:46385:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:27098:6745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:6962:7796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:12148:16918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:21185:22285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:15133:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:20149:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1429:42494:17717,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:5555:24022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:41418:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:20173:2597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2361:9632:2527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:10117:2527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:37640:18726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:39039:11089,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1276:52072:2695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:35981:24961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1354:5126:22719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1456:33578:17016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1489:45972:25507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2247:4592:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2461:33764:2906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2472:22099:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2483:20691:22495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:28805:18669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1121:46053:21164,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1139:29501:22145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1169:14526:21150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1210:14357:19174 | YES_LDAS | 2.5249 | GT | 1.9219 | AG | 1.8892 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr10:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[44136]""]" | chr10:113040126-chr10:112888735 | False | 1 | PASS | 753 | ||||||||||
| COMMD10--AP3S1 | 282 | 19 | 282.0 | 19.0 | ONLY_REF_SPLICE | COMMD10^ENSG00000145781.9 | chr5:116092700:+ | AP3S1^ENSG00000177879.17 | chr5:115895087:+ | 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LLT4:3:1149:52007:27721,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:12731:22495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:12739:22481,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1161:23579:25143,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1161:45333:15405,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:16144:11817,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:4859:19202,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1169:38360:8651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:37001:13163,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:48343:8230,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1187:4325:10823,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1196:39654:12322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1197:37219:14942,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1197:8038:11733,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1201:22673:27525,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1201:35107:22831,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1202:50487:9505,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1205:26694:14116,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1216:46895:7207,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1240:50066:27161,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1243:28587:6801,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1260:36046:14844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:5247:7404,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1269:1914:19790,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1278:46563:7081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1281:26532:3074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1284:13046:1967,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1289:39913:14368,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:5886:2177,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1313:8985:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:21079:13499,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1335:27843:22999,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1340:3103:13359,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1346:26297:8384,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1354:6461:11551,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1357:42494:18641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1359:18887:11523,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1364:33837:15026,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1367:51490:24751,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1369:13895:15208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1369:34428:24457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:4576:27399,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1385:32130:2373,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1414:14373:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1415:44929:16357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1420:23037:11986,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1428:38141:22257,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1432:21565:3494,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1432:48844:10584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1435:43335:26152,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:42647:13639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1461:7156:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1466:37405:22887,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1471:33684:21878,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1477:48537:7137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1479:18847:28884,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2105:23547:23097,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2106:20740:9800,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2108:15020:11159,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2113:6792:21878,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2121:37591:7572,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2130:4560:20729,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2132:18887:4349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2134:10368:18403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2138:48496:12308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2152:10926:15110,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2154:10417:14900,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2157:50098:27385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2161:23336:10402,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2170:42251:7656,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2172:44662:16820,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2174:18887:4125,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2184:23725:8244,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2201:30868:25157,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2204:5838:6128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2230:38805:10711,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2262:10490:5946,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2267:18402:29067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2268:28951:8749,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2294:38473:15293,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2302:51943:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2305:31734:17408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2323:16047:19272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2323:16064:19272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2324:32114:22018,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2326:15392:24723,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2346:39929:29081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2348:9681:3228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2352:45932:17366,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2357:17471:17843,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2360:17439:11817,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2362:9139:4391,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2378:17609:15811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2381:30351:14116,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2383:3427:28744,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2393:42380:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2396:23199:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2407:2869:23406,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2415:7707:12028,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2416:13159:28562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2456:12277:12995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2459:35844:4321,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2467:29606:12742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2470:49605:8146,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2473:2966:9618,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2487:28862:10640,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2491:18571:21766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2493:21678:20141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1112:20351:12742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1117:47364:27497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1136:50268:6297,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1138:29339:29627,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1138:46789:14732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1139:11533:29697,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1140:25302:15265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1148:18863:27427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1155:52129:23784,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1157:3589:11089,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:13353:8693,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1162:36588:29571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1164:49119:5120,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1167:8702:14648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1176:30771:7137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1178:31669:19734,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1182:18798:16357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1184:31062:20729,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1185:33109:9870,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1189:45236:23700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1193:1801:3536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1198:51902:2934,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1213:26524:29011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:50656:28464,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1226:5425:20435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:24801:12658,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1250:18927:16806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1257:25772:14816,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1270:20448:5260,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1273:34646:10767,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1273:5102:4181,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1291:29639:21234,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:39767:6885,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:9640:11930,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1310:9600:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1312:13273:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1319:10109:24036,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1320:40892:13961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1322:4325:26208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1327:11315:17997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:46247:21276,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1336:42882:28618,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:29372:14634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1344:45366:3466 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1107:46741:7165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:50228:14634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1344:7779:17254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:44387:20715,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:51821:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:8710:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2474:26055:26993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2485:39783:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1109:29833:2653,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1359:42477:5722,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1479:34096:12560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1483:42016:1392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2101:47509:15839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:41749:17689,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2323:19575:7053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2427:3419:8300,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1172:2529:2107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1196:3807:10094,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1227:40366:18543 | YES_LDAS | 1.0184 | GT | 1.9329 | AG | 1.8256 | "[""YOSHIHARA_TCGA"",""Klijn_CellLines"",""GTEx_recurrent_StarF2019"",""DEEPEST2019"",""ChimerPub"",""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr5:0.17Mb]""]" | chr5:116092700-chr5:115895087 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 301 | ||||||
| LEPROT--LEPR | 272 | 10 | 272.0 | 10.0 | ONLY_REF_SPLICE | LEPROT^ENSG00000213625.9 | chr1:65425378:+ | LEPR^ENSG00000116678.20 | chr1:65565546:+ | 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5_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:37777:14284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2143:29865:12966,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2146:32656:15895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2153:39428:29361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2154:4204:6381,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2162:40552:1518,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2170:46741:17450,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2171:6307:4979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2177:24841:21724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2191:10562:26334,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2192:49548:2219,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2193:32074:18613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2197:10449:12826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2206:46377:12140,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2212:48108:12560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2213:29436:10346,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2214:15069:14017,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2215:13297:19104,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2217:37437:3943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2220:49233:18852,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2273:35245:1911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2277:7949:14942,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:50066:12336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2284:34112:25536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2285:23717:7978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2285:25731:28534,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2287:49063:3508,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2288:6728:17955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2292:20950:9267,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2292:31491:25115,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2305:6663:26446,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2307:38780:12658,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2321:43901:6731,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2323:22107:29095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2330:32114:18992,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2333:32389:7249,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2336:51854:10753,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2346:6736:18053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2351:37049:10220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2359:39630:21668,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2362:43149:19468,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2366:20602:22481,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2368:42987:2794,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2386:17609:3228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2389:14017:6955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2389:30884:4503,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2392:1510:20295,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2394:39039:28969,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2416:47186:16624,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2417:50737:7530,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2418:25691:9239,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2428:16703:25255,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2451:33578:29291,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2462:7537:2485,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2469:21961:5414,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2477:18701:29165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2487:33150:25297,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:50915:7278,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1104:43837:28422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1128:32689:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:43934:9141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1139:29525:5484,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1180:26629:27792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1194:40188:11958,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1207:38950:24078,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1228:50033:27469,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1231:25683:11495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1231:41499:7193,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1248:49402:20855,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:41677:14620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1273:27147:25858,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1285:19672:24288,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1289:18385:27217,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1296:37211:6997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1301:11808:8146,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1343:39047:12336 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1366:7488:23812,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1413:44039:15629,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2132:17754:20211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:24040:24933,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:39662:15335,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1396:47995:27553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2122:39913:9323,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2341:21524:4797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2422:14243:11579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:20068:18193 | YES_LDAS | 0.954 | GT | 1.8256 | AG | 1.9219 | "[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.09Mb]"",""NEIGHBORS[89682]""]" | chr1:65425378-chr1:65565546 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 282 | |||
| TCF7L2--AL158212.1 | 194 | 16 | 194.0 | 2.96 | ONLY_REF_SPLICE | TCF7L2^ENSG00000148737.17 | chr10:113040126:+ | AL158212.1^ENSG00000225292.2 | chr10:112905977:+ | 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166:237:23LGNLLT4:3:1363:39686:9547,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1370:10247:9562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1390:13790:19146,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1393:44128:10682,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1394:19623:27287,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1406:41256:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1429:13928:16694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1443:3403:14017,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1444:47412:9477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1465:10902:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2107:34889:14326,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2108:12472:11453,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2110:39460:4699,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2130:19356:12616,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2158:6930:15867,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2165:4228:22173,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2169:48707:18081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2188:44726:7235,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2197:36798:16091,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:31184:11832,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:29258:2948,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2282:45260:21136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2304:42275:18039,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2309:43780:20085,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2311:44435:14886,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2331:26856:6325,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2350:1712:25970,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2350:37551:14760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2371:12625:8777,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2379:3136:3999,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2409:41175:7418,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2412:21573:11159,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2414:47048:10584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2423:23070:3130,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2423:23733:10388,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2426:8362:29389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2434:16331:5638,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2445:12925:26614,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2469:49564:26180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2489:18110:18417,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:27495:16932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1107:17423:7221,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1108:22576:11019,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1108:45592:18263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1128:19461:24961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1134:37300:23153,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1149:5102:12924,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1154:5927:15138,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1162:24332:26530,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1162:25019:20799,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1170:1364:28226,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:10231:10094,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1219:42356:8455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1246:41596:17142,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1257:33360:9940,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:2553:21682,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1279:3759:4685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1295:35747:21836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1297:41863:4041,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:31046:4671,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1305:50842:8020,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:16039:4181,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:41814:14410,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1320:7221:19847 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:46385:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:27098:6745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:12148:16918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:15133:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:20149:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:5555:24022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:41418:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2361:9632:2527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:35981:24961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1354:5126:22719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1489:45972:25507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2247:4592:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2461:33764:2906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2472:22099:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:28805:18669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1139:29501:22145 | YES_LDAS | 0.6664 | GT | 1.9219 | AG | 1.9899 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr10:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[44136]""]" | chr10:113040126-chr10:112905977 | False | 1 | PASS | 210 | ||||||||||
| SPAG9--MBTD1 | 173 | 3 | 173.0 | 2.88 | ONLY_REF_SPLICE | SPAG9^ENSG00000008294.21 | chr17:51120354:- | MBTD1^ENSG00000011258.16 | chr17:51201696:- | 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| &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1315:22066:27343,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2131:2108:25395,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2321:11849:21780 | YES_LDAS | 0.595 | GT | 1.7819 | AG | 1.6402 | "[""Klijn_CellLines"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[56557]""]" | chr17:51120354-chr17:51201696 | False | 1 | PASS | 176 | ||||||||||
| AC026191.1--SRGAP3 | 114 | 2 | 114.0 | 2.0 | ONLY_REF_SPLICE | AC026191.1^ENSG00000254485.5 | chr3:9326010:- | SRGAP3^ENSG00000196220.16 | chr3:9124917:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:2804:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:31564:26614,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1118:15724:3186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1119:3330:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1128:43634:2597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1149:47259:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1177:49119:24849,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:9147:18698,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1221:8054:11145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:2440:20085,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:39023:10136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:46361:16147,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:11517:29669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:21905:23728,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:51660:13807,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:15845:19538,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:14001:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1333:12205:5134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:10368:29333,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:14729:27777,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1411:44702:4475,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:4802:23896,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:51166:25900,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:49249:25550,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2109:19421:9477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2119:24372:16652,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2123:39751:13135,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2128:42332:6983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:28587:10024,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2175:39727:13765,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2182:7561:11719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2186:51247:24947,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:24283:20393,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:16525:17661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:45576:19692,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2272:15327:16568,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2288:6291:7670,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2306:41588:28114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2311:50131:23546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2327:37648:12014,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2354:40212:4097,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:3063:11187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2405:10312:1659,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2415:48391:18347,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:18248:27315,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:37575:21696,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:21937:21066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:49257:24807,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2470:14146:13989,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2496:27131:2457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1115:37526:1827,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1135:39444:12546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:51490:16736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1170:45066:23742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1183:26144:8987,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1191:29841:15026,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:1849:5890,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:38918:24022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1235:42073:15363,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:18814:21878,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:13248:12378,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:29703:8707,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1276:47728:6549,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1285:26710:4111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1286:47695:27651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1287:33028:19370,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:25553:2667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1326:35277:16932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1335:26039:25171,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1364:15570:12756,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1403:36936:22579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1405:20780:18922,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1406:26014:4111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1419:28676:16764,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:45325:4713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1436:46628:20141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1441:21047:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1461:19858:2275,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1463:22989:25017,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1466:1437:24877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:7618:13247,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2124:50106:10556,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2129:21233:13513,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2143:14195:26853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2166:43489:10304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2173:19874:19230,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2173:35827:5862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2182:32543:2415,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2219:42599:17619,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2243:8257:27693,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2267:28999:3929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2272:13863:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2288:4948:19776,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2292:20141:13667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2297:29105:6969,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2312:39403:16904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2341:37882:28506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2362:3168:3550,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2384:9834:17843,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2426:5312:15251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2435:41167:19174,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2470:1162:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2481:40948:4335,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1164:44791:7067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1165:5498:6997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1174:21629:10921,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1186:17657:25732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1223:38788:17296,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1231:20683:5862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1249:4422:14186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1264:12577:10879,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1307:36240:1617,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1335:35682:2331,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1339:19194:29039 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2118:18547:17016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2209:8588:1869 | YES_LDAS | 0.3925 | GT | 1.9656 | AG | 1.8062 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.04Mb]"",""NEIGHBORS[42903]""]" | chr3:9326010-chr3:9124917 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 116 | |||
| ABLIM3--PTPRB | 97 | 0 | 97.0 | 0.0 | INCL_NON_REF_SPLICE | ABLIM3^ENSG00000173210.20 | chr5:149251419:+ | PTPRB^ENSG00000127329.16 | chr12:70558894:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1110:8920:5078,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:10441:24190,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:32405:6213,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1133:40196:15643,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:24040:12182,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:11889:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1185:35261:16680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1194:5975:8805,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:11104:16259,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1209:1955:4615,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1209:30787:21514,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:49103:11005,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:23951:8721,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:40220:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:14397:1308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1275:44524:13947,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:14607:5316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1291:51530:5400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:43594:21808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:4568:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1319:47097:23896,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:27276:21710,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:28870:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1333:7860:3634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1348:16533:6633,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1371:28894:28016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1412:20465:29361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1418:41636:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:42138:5302,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:46822:10472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1440:29719:1981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:34549:13317,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:7723:14382,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:42696:29165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:44136:15012,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:7763:23952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2132:9349:13135,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:38157:26769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2175:4875:3704,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:25917:7810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2203:51142:9688,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2211:11557:1995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:39686:27623,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2236:50147:11523,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2246:17439:3830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:10174:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2366:52048:3074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2383:11735:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2385:28166:28436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:30901:18992,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2460:7326:17759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2469:43262:9407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2489:12504:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2490:19510:15797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2495:22883:21584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1104:47566:18712,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1132:50414:23336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1149:2634:5260,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1155:47412:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1166:12180:3074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1180:18936:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:37073:14382,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1215:51328:6927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:14073:9772,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1278:36742:23756,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:43739:21220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1337:47631:17058,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1362:15950:11565,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:41749:2387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:5409:7488,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1389:17746:10668,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1405:5037:9141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1429:12561:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1430:9899:25718,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:48699:4951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1457:7545:21416,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1473:2036:16582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2125:11331:22677,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2152:49645:26685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2184:43788:7908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2207:30059:10360,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2213:2238:8553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:46417:24401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2248:41086:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2292:8103:24625,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2319:3362:19917,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2326:2327:13527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2341:47639:21248,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2364:48593:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2388:23425:28520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2436:24356:14298,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2461:37073:23434,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1174:39525:12210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:14429:1308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:13022:25886,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1229:33506:16105,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1345:27535:7502 | . | NO_LDAS | 0.3282 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr12]""]" | chr5:149251419-chr12:70558894 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 97 | |||
| GDPD5--MAP6 | 90 | 12 | 90.0 | 12.0 | ONLY_REF_SPLICE | GDPD5^ENSG00000158555.15 | chr11:75477619:- | MAP6^ENSG00000171533.12 | chr11:75608322:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1111:1785:2219,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1119:2173:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:30310:12252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:37996:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:26217:6255,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1212:32648:25409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:30545:21346,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:15416:18655,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1266:13329:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1275:14106:21542,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:46725:7278,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1278:28627:22425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:48246:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1326:51587:12168,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:12787:22088,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1358:1291:26166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1373:29056:15180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1402:13240:4349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:46417:10136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:44354:27105,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1484:19704:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1485:20287:8174,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:38902:11131,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:26516:28604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:26119:17436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2216:29647:4937,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2253:15635:7628,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:26548:12910,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2348:41968:15965,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2348:6809:13359,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2443:19114:9029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:37834:29263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:46037:18501,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:49313:19748,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2474:25197:14718,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:39686:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:1049:20281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:5474:16147,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1213:2141:17773,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:40002:29431,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1220:42704:14214,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1234:9745:15166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1237:1574:10066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:24404:15783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1255:31386:6241,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1260:4042:3634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:23838:2471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:22358:8595,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:35391:17044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:22956:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:51732:16343,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1346:43756:3032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1356:13596:24611,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1362:8111:11860,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:38441:22355,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1367:48990:14620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1380:50389:24527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1398:14955:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1441:47461:18249,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1466:14963:24765,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2157:21921:6072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2158:28174:15895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2185:21864:14326,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2194:10174:27623,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2219:39832:10360,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2219:41466:3522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2229:46158:24681,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2230:27624:18754,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2267:21977:25227,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2308:44047:21388,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2329:33635:20141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2361:49152:21346,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2378:43764:4363,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2401:33352:20295,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2440:49168:25522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2443:15942:21108,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2444:21621:1603,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2458:35221:11061,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2462:46652:13821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2467:4098:8188,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1116:19041:1813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1131:5401:13639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1141:1453:23672,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1144:19664:9758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:26289:18459,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1170:49831:21626,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1176:36394:1126,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1210:24194:23658,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1278:2561:5666,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1291:9050:11439 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2209:46336:28128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:29218:21654,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:26880:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:20643:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:48238:8945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1465:44063:25928,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2116:9365:9604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2151:13669:12154,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2256:47590:3228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2415:24582:1126,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2451:38991:3690,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1328:13313:13191 | YES_LDAS | 0.3451 | GT | 1.9086 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr11:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[60977]""]" | chr11:75477619-chr11:75608322 | False | 1 | PASS | 102 | ||||||||||
| MMP24OS--IGH@-ext | 70 | 0 | 68.26 | 0.0 | INCL_NON_REF_SPLICE | MMP24OS^ENSG00000126005.17 | chr20:35277774:- | IGH@-ext^IGH.g@-ext | chr14:105605894:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:45956:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1145:5255:25129,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:13143:2359,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:31604:15363,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:23312:16582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1193:49985:8469,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:33384:7263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1226:44508:17002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1229:13580:5722,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:28587:25493,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:46992:16764,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1278:21387:15349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:48504:19048,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:32324:5736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1402:34015:6591,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:27794:9155,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1410:38635:22663,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:28805:1238,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:46272:2401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2113:13758:18361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2174:50883:15293,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2183:7156:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:50252:16554,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2195:49661:10374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2237:33530:23770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:10765:14606,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2274:43011:10991,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2310:45495:1448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:22819:21584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2420:48569:24429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2455:32114:10865,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2485:13766:6829,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2492:26249:15531,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1123:23231:18599,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1183:50398:20309,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:11468:7137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:43715:19636,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1234:47202:21052,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:42607:2107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1316:3492:24737,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1342:37712:5988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1349:24631:26376,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1351:49006:29305,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1393:27204:12981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1417:50478:18263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1462:47315:21920,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2108:33425:16021,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2126:25974:23938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:11436:22243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2171:32842:5008,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2184:35957:26741,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2203:39994:16245,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2221:22762:29109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2223:51927:11888,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2244:2675:27385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2345:50228:13877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2408:11655:16540,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2422:48771:25059,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2431:25763:9085,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2473:47695:17114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1112:15659:27679,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1146:27778:19524,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1150:7027:4517,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1208:7974:4055,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:32947:22369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1237:19639:14844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1290:12925:8146,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:30990:10122,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1328:11493:21920,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1339:39978:23812 | . | NO_LDAS | 0.2309 | AG | 1.2419 | CC | 1.5058 | "[""INTERCHROMOSOMAL[chr20--chr14]""]" | chr20:35277774-chr14:105605894 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 70 | ||||||
| SLC22A11--RNH1 | 60 | 0 | 60.0 | 0.0 | INCL_NON_REF_SPLICE | SLC22A11^ENSG00000168065.16 | chr11:64556383:+ | RNH1^ENSG00000023191.17 | chr11:502144:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1118:40552:7964,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:1582:9407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:19615:20491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:26411:10150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1264:47566:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1284:39298:28997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:39832:8202,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:17083:4839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1297:50195:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1351:8289:4209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1357:16177:17871,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:12051:21682,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1383:38416:11551,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:2327:25942,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1441:49322:13485,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1444:1364:25451,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2104:8726:13961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2131:23425:1729,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2141:35383:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:41620:24639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2156:25003:7544,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2183:37858:10220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:36839:4503,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:8499:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2316:30472:3873,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2326:39282:21150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:31386:11061,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:40220:24513,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2385:8313:18011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2408:29946:12854,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:4786:17955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2484:11719:15194,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:27487:8791,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:4495:22607,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2497:39864:26923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1290:48593:8917,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1375:6598:4139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1379:30957:29403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:8645:11299,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1459:20100:8973,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1459:45519:14130,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1472:2885:9954,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2117:7464:5106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2132:37397:13933,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2141:41499:27427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2142:16064:6801,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2182:25545:26138,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2186:36272:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2207:26006:28590,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2268:7957:20589,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2383:29606:1336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2396:9956:19566,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2438:38546:22677,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2445:5708:5484,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2496:47202:19594,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1142:29736:3662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1144:31038:15194,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1161:19211:17156,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1254:28368:14101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1310:14607:21682 | . | NO_LDAS | 0.203 | GT | 1.4566 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr11:64.05Mb]""]" | chr11:64556383-chr11:502144 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 60 | ||||||
| CHCHD10--AC005064.1 | 48 | 0 | 48.0 | 0.0 | INCL_NON_REF_SPLICE | CHCHD10^ENSG00000250479.9 | chr22:23767834:- | AC005064.1^ENSG00000234715.2 | chr7:103446122:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:32737:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:38667:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1137:40787:15545,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:10603:17913,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1181:34307:29515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:8338:16652,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:20497:7642,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1232:26233:15615,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:43230:7810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1261:30189:16610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1264:8880:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1267:28037:16329,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1287:20966:13751,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1297:6558:6927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:25238:8567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1353:24089:13695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1381:49038:10304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:16306:26362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:27559:28562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1429:27802:27637,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:23345:8034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1460:27325:2990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2138:9988:3032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:47801:15110,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2205:18377:13863,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2265:11153:12364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2268:36297:17128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2268:6008:28506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:13960:4587,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2426:21508:22285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1179:50284:17563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1210:39678:20183,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1227:9211:24471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1230:46401:26811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1275:24857:9449,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1325:8362:11117,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:13920:26068,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1375:31548:28324,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1388:52177:1476,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1396:25254:29445,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:40325:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1458:1963:25031,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1490:14543:16077,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:4657:20253,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2214:41151:26180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2218:50988:14914,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1227:51482:5400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1243:43853:28226 | . | NO_LDAS | 0.1624 | GT | 1.6402 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr22--chr7]""]" | chr22:23767834-chr7:103446122 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 48 | |||
| AKAP12--MT-RNR1 | 38 | 0 | 38.0 | 0.0 | INCL_NON_REF_SPLICE | AKAP12^ENSG00000131016.17 | chr6:151351470:+ | MT-RNR1^ENSG00000211459.2 | chrM:1419:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:31426:13205,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:9211:25732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:30245:5834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1307:33619:16834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:22115:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1373:38530:21304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:24057:2738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2119:5474:29403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2215:11032:13583,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2239:26872:18908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2261:44168:13723,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2262:17787:3452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2273:32786:10542,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2347:11727:4055,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:38036:11733,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:41151:29515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1128:12035:27988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1139:1688:20127,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1204:37219:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1209:7868:15419,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:45519:4685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1296:46215:27189,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1393:32122:18754,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1412:3014:26741,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1447:34913:8062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:24437:12924,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1452:32980:2443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2107:20206:15853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2190:13968:2695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2302:43586:8847,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2389:21629:21150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2393:36062:17955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2486:13734:3999,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1152:44459:13863,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1181:14535:1995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:1825:1757,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:49928:6969,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:8952:14802 | . | YES_LDAS | 0.1286 | GT | 1.6402 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr6--chrM]""]" | chr6:151351470-chrM:1419 | False | 0 | Does | not | meet | inclusion | criteria | FAIL | 38 | |||||
| RPL17--RPL17P12 | 35 | 0 | 35.0 | 0.0 | INCL_NON_REF_SPLICE | RPL17^ENSG00000265681.7 | chr18:49491405:- | RPL17P12^ENSG00000230559.1 | chr2:146194373:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:35156:21374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:20020:15783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:16848:4433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1290:25254:12014,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:32656:4629,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:38174:5862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:33708:24555,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:33853:17492,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:31532:26222,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1436:8087:23728,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1461:4042:21710,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1472:30852:16806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:8823:3648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:21799:26152,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2235:19890:26460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2289:31022:21976,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:37850:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2332:41240:10500,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2358:4066:21192,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:36216:20827,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:12318:18641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2483:49152:9940,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:19316:1308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1148:29428:4251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1163:51190:16778,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:7076:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1328:18296:23280,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2235:41555:26993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2268:31443:4853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:51627:13163,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2298:37753:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2474:10886:16301,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1116:40609:1645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1278:23652:17506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1312:14171:2121 | . | NO_LDAS | 0.1184 | GT | 1.9219 | AG | 1.8892 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTERCHROMOSOMAL[chr18--chr2]""]" | chr18:49491405-chr2:146194373 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 35 | |||
| SEPTIN7P14--PSPH | 34 | 0 | 29.55 | 0.0 | ONLY_REF_SPLICE | SEPTIN7P14^ENSG00000245958.6 | chr4:119455133:+ | PSPH^ENSG00000146733.14 | chr7:56021231:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:13014:28478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:11210:13023,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1291:40059:16049,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1301:6331:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:19914:14116,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:24704:15937,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:37203:20407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:37915:19706,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1459:11517:5260,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1495:37478:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2127:47501:26166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:14882:15825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:48504:22271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:11185:25395,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2263:49540:4251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:3799:22859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2315:9713:3957,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:45244:23994,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:5716:11075,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2423:34800:17731,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:47930:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:8427:14312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2120:14405:19706,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2189:21913:20911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2217:33400:11439,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:37858:13443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2272:50567:3592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2302:31718:3284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1131:28239:23041,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1222:51846:20911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1227:13248:19580,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1228:29865:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1232:14996:6717,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:21079:19636 | . | YES_LDAS | 0.1 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr7]""]" | chr4:119455133-chr7:56021231 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 34 | |||||||
| BPTF--DCXR | 33 | 0 | 16.5 | 0.0 | INCL_NON_REF_SPLICE | BPTF^ENSG00000171634.18 | chr17:67945620:+ | DCXR^ENSG00000169738.8 | chr17:82037080:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1129:27600:5736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:24429:5456,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:30820:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:16355:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1306:40576:15433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1342:32608:24134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:21079:7782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:36094:2429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:38076:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:6064:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:43286:25676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:34557:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:31483:2738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:45608:16974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:40811:18417,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1147:39792:8048,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1151:24048:26460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:33109:13541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1190:10004:20379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:31273:23139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:3637:18403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1336:49346:5120,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1388:27519:2766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:4301:23532,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1418:12496:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1439:47752:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2323:35569:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2363:8289:23770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1140:5296:25507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1201:21896:20575,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1241:31305:19496,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1241:46951:16638,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1342:51692:20225 | . | NO_LDAS | 0.0558 | GT | 1.5628 | AG | 1.6049 | "[""INTRACHROMOSOMAL[chr17:14.05Mb]""]" | chr17:67945620-chr17:82037080 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 33 | ||||||
| BPTF--BSND | 33 | 0 | 16.5 | 0.0 | INCL_NON_REF_SPLICE | BPTF^ENSG00000171634.18 | chr17:67945620:+ | BSND^ENSG00000162399.9 | chr1:55006997:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1129:27600:5736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:24429:5456,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:30820:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:16355:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1306:40576:15433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1342:32608:24134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:21079:7782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:36094:2429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:38076:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:6064:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:43286:25676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:34557:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:31483:2738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:45608:16974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:40811:18417,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1147:39792:8048,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1151:24048:26460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:33109:13541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1190:10004:20379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:31273:23139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:3637:18403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1336:49346:5120,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1388:27519:2766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:4301:23532,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1418:12496:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1439:47752:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2323:35569:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2363:8289:23770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1140:5296:25507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1201:21896:20575,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1241:31305:19496,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1241:46951:16638,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1342:51692:20225 | . | NO_LDAS | 0.0558 | GT | 1.5628 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:67945620-chr1:55006997 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 33 | ||||||
| UMAD1--GLCCI1 | 31 | 0 | 31.0 | 0.0 | ONLY_REF_SPLICE | UMAD1^ENSG00000219545.11 | chr7:7801743:+ | GLCCI1^ENSG00000106415.13 | chr7:8003908:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:13103:5344,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:33991:4979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:13920:14354,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:19704:9099,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:23086:15713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1256:33748:23448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:6558:4797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:20384:5344,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2160:30351:23700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2327:13912:2794,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2332:37866:16904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:50737:29389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:25294:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:35423:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:42469:5904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:11331:12224,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:33036:23139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1218:37227:22411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:24016:27806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1356:29250:18571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1452:1405:11089,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1457:37753:6927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2116:38546:14662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2130:16986:4727,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2207:18766:22131,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2307:40390:8525,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2322:33053:3270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2415:24599:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:49629:18585,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:44993:16077,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1334:18782:5288 | . | YES_LDAS | 0.1049 | GT | 1.9656 | AG | 1.7465 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[776]""]" | chr7:7801743-chr7:8003908 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 31 | |||
| FBXO25--SEPTIN14 | 29 | 0 | 29.0 | 0.0 | ONLY_REF_SPLICE | FBXO25^ENSG00000147364.17 | chr8:435707:+ | SEPTIN14^ENSG00000154997.9 | chr7:55796092:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:39120:4895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1132:31710:21962,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:11986:11817,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1323:21969:15265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1323:46166:26769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1353:50478:27651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:26079:11425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2244:5676:7838,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:16444:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2298:31435:20589,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2327:17115:27623,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:30464:13219,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:19591:1504,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:39889:23069,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1117:9066:28898,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:16266:3060,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:37235:14662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1287:26484:14228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1289:2286:13737,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:3184:14228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1382:12043:20351,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1450:24234:15545,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2123:4907:15699,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2351:19858:10963,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2476:39314:14340,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2493:16476:20491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1186:22649:8427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1202:47890:6521,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1289:42720:26881 | . | YES_LDAS | 0.0981 | GT | 1.7819 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:435707-chr7:55796092 | True | aih_curated_blacklist | score(6) | 0 | aih_curated_blacklist | score(6) | FAIL | 29 | ||||||
| NPM1--MT-RNR2 | 27 | 0 | 13.48 | 0.0 | INCL_NON_REF_SPLICE | NPM1^ENSG00000181163.14 | chr5:171391799:+ | MT-RNR2^ENSG00000210082.2 | chrM:1959:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:1089:19762,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1246:30658:9856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1259:47582:23868,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:45859:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:44451:3732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:19033:7740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:2480:2051,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:21452:22159,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:25100:18810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2385:48869:23882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:24736:4027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1109:34970:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:51441:13821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1308:43432:12140,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:33870:10711,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2102:21492:8693,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2131:25561:3802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2133:36224:11649,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2179:17860:16021,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2288:27713:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2325:39039:25213,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2385:39306:21248,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1113:31095:8875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:47679:4111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1233:50292:14045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1234:37526:27553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1254:17552:20729 | . | NO_LDAS | 0.0456 | GT | 1.9656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chrM]""]" | chr5:171391799-chrM:1959 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 27 | |||||||
| ACTR5--RN7SKP231 | 26 | 0 | 26.0 | 0.0 | INCL_NON_REF_SPLICE | ACTR5^ENSG00000101442.10 | chr20:38756039:+ | RN7SKP231^ENSG00000200151.1 | chr8:91595092:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:50211:23125,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:29169:18824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:28045:19650,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:23061:9730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:49524:22831,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1438:49669:1112,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:4956:20463,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2167:10190:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2193:37114:14508,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:32284:8076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:47825:29081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:37915:4629,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2324:3492:20841,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2425:22212:2906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:38764:2233,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1423:24145:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1485:29930:8763,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:16962:4125,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2127:6461:19258,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2216:36750:14130,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2379:24008:25662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2404:1947:3985,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2418:3492:11509,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:42429:2864,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1209:7537:15265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1223:32114:6353 | . | YES_LDAS | 0.088 | GT | 1.5656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr20--chr8]""]" | chr20:38756039-chr8:91595092 | False | 0 | Does | not | meet | inclusion | criteria | FAIL | 26 | |||||
| SEPTIN14--AP006222.1 | 25 | 0 | 25.0 | 0.0 | INCL_NON_REF_SPLICE | SEPTIN14^ENSG00000154997.9 | chr7:55795924:- | AP006222.1^ENSG00000228463.10 | chr1:289370:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1232:28619:13695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:14810:14101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1427:44451:6535,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:27915:6227,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:33764:11761,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2111:1720:12000,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2120:22875:24709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2124:20812:26572,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:19243:6955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2414:40204:3130,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:10902:7978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:10481:5988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2498:8435:28226,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:48254:1434,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1315:23862:6857,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1338:42000:17002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1484:13887:29235,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1494:13159:25648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2215:37801:11972,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2381:12520:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2472:2416:11691,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1140:37267:18810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1142:27762:11509,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1210:20003:18221,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1343:36467:7614 | . | YES_LDAS | 0.0846 | GT | 1.5546 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:55795924-chr1:289370 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 25 | ||||||
| RN7SL702P--RN7SL4P | 24 | 0 | 21.92 | 0.0 | INCL_NON_REF_SPLICE | RN7SL702P^ENSG00000243980.3 | chrY:12273695:+ | RN7SL4P^ENSG00000263740.2 | chr3:15738565:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:15667:28870,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:38254:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:2497:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2207:25488:3480,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2222:18329:20701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:23385:6479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2275:26556:1322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:8944:22635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:51740:10697,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2392:25966:27988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:31710:20421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:9867:18880,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2479:6178:8763,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:16468:1084,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:42081:28576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1369:19178:29655,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1471:39905:19931,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:47906:28660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2343:40770:11958,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2349:27373:23252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2357:48464:7768,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2475:9236:15685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1244:4770:21486,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1316:30917:25578 | . | YES_LDAS | 0.0742 | GT | 1.8892 | AG | 1.7968 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chrY--chr3]""]" | chrY:12273695-chr3:15738565 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 24 | ||||||
| ARHGAP29-AS1--NME2 | 22 | 0 | 22.0 | 0.0 | ONLY_REF_SPLICE | ARHGAP29-AS1^ENSG00000226835.3 | chr1:94249519:+ | NME2^ENSG00000243678.12 | chr17:51169937:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1113:49136:5820,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:50576:25998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:47574:10234,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:38586:6044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1188:3209:5022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1193:14996:8875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:50033:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1444:36968:17563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2270:37494:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2349:2027:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:5927:18277,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2493:40997:18515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1250:13709:10290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1360:33951:23209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1468:6914:26040,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2142:46191:23420,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2148:17940:8875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2230:30674:28156,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2252:31459:4209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2358:21419:22411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1171:47186:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1208:42833:28674 | . | YES_LDAS | 0.0744 | GT | 1.8295 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:94249519-chr17:51169937 | False | 1 | PASS | 22 | ||||||||||
| AC008740.1--CRYM-AS1 | 21 | 0 | 21.0 | 0.0 | INCL_NON_REF_SPLICE | AC008740.1^ENSG00000257403.2 | chr16:21352138:+ | CRYM-AS1^ENSG00000189149.12 | chr16:21338921:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1110:9187:17030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:36847:28926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:24882:2401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:30262:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:25998:8959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2180:34315:11397,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2247:49386:13009,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:38424:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:22277:22523,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1152:10150:13933,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:24000:10823,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1187:10247:2499,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1297:44176:2752,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1413:36467:15909,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2220:42121:5946,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2245:22487:23952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2388:28506:19552,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2414:23684:15012,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1153:30051:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1159:32333:7095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1204:3387:26264 | . | YES_LDAS | 0.071 | GT | 1.7232 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]" | chr16:21352138-chr16:21338921 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 21 | |||
| AC211476.4--CCDC146 | 20 | 1 | 4.0 | 0.1 | ONLY_REF_SPLICE | AC211476.4^ENSG00000277125.1 | chr7:73069531:+ | CCDC146^ENSG00000135205.15 | chr7:77236947:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:43780:25774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:30229:19650,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1240:29226:24695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:51951:11313,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:26257:16974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:50697:27581,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:36903:20701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:43861:25381,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2361:20748:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:19890:12981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1126:5587:22621,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:4333:15012,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1235:39565:24471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1394:35649:5022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2298:41604:20043,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2437:39824:16007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2478:39007:14564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:44435:25900,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1276:52137:14522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1296:3605:21374 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2147:9770:2962 | YES_LDAS | 0.0138 | GT | 1.4566 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr7:4.05Mb]""]" | chr7:73069531-chr7:77236947 | True | aih_curated_blacklist | score(5) | 0 | aih_curated_blacklist | score(5) | FAIL | 21 | ||||||
| NUPR2--PSPH | 19 | 0 | 7.47 | 0.0 | ONLY_REF_SPLICE | NUPR2^ENSG00000185290.4 | chr7:56116015:- | PSPH^ENSG00000146733.14 | chr7:56021231:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:41507:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:13014:28478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:11210:13023,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:19914:14116,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:24704:15937,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:37203:20407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1334:30221:7530,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:37915:19706,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:10910:15643,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:14882:15825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:48504:22271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2263:49540:4251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:5716:11075,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:37858:13443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2272:50567:3592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2302:31718:3284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:6744:16638,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1222:51846:20911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1279:16217:17717 | . | YES_LDAS | 0.0253 | GT | 1.8892 | AG | 1.9656 | "[""BodyMap"",""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[63077]""]" | chr7:56116015-chr7:56021231 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 19 | |||||||
| GOLGA6L17P--GOLGA2P6 | 19 | 0 | 7.82 | 0.0 | INCL_NON_REF_SPLICE | GOLGA6L17P^ENSG00000277741.4 | chr15:82521523:+ | GOLGA2P6^ENSG00000241621.1 | chr10:30370881:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:6161:1897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1343:22317:11663,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1396:7326:27119,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:11655:19482,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:14680:1939,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:40164:20491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1450:15886:28576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2118:48658:25536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:47526:24499,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2288:5247:9674,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2479:28830:5204,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:18256:2695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1247:49500:19959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:4398:20617,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1386:11549:20281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2435:40156:20897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2460:40269:7109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1159:48132:8034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1217:31200:8833 | . | YES_LDAS | 0.0265 | GT | 1.9656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr15--chr10]""]" | chr15:82521523-chr10:30370881 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 19 | |||||||
| ZBED3-AS1--PDE8B | 18 | 0 | 18.0 | 0.0 | ONLY_REF_SPLICE | ZBED3-AS1^ENSG00000250802.7 | chr5:77118521:+ | PDE8B^ENSG00000113231.14 | chr5:77311994:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:39395:17114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1129:39775:26236,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1253:20554:5610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:11218:18081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1394:2189:11243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:6623:1855,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2384:14624:6409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2490:43723:10935,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1137:47242:5988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:45835:27876,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1355:48043:5666,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1360:35706:5456,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1468:36628:8398,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1480:1097:3046,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2476:43828:16890,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1117:37162:7334,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:39428:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1145:43570:19889 | . | YES_LDAS | 0.0609 | GT | 1.9329 | AG | 1.8256 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[43540]""]" | chr5:77118521-chr5:77311994 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 18 | |||
| IGH@-ext--CREB3L2 | 18 | 0 | 18.0 | 0.0 | INCL_NON_REF_SPLICE | IGH@-ext^IGH.g@-ext | chr14:105760805:- | CREB3L2^ENSG00000182158.15 | chr7:137928171:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:49241:18810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1391:29218:6016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:33214:10220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1466:45171:7670,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2182:18660:26544,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:48060:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2349:27495:26432,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1240:25456:11803,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:47752:11635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:2853:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:43416:27357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:12156:26993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1303:41223:4671,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1348:43853:12700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1455:10619:10935,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2172:30561:14284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2207:3459:12938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2237:17771:23041 | . | NO_LDAS | 0.0609 | CC | 1.4566 | CC | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr7]""]" | chr14:105760805-chr7:137928171 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 18 | ||||||
| HLA-C--MUC16 | 18 | 0 | 18.0 | 0.0 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269489:- | MUC16^ENSG00000181143.15 | chr19:8848985:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:36159:18571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:34970:20211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1240:48432:27693,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1243:48545:22901,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1268:27001:4055,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1417:7456:1336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:9729:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2201:49718:3382,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2226:36458:18894,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:31354:19076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:13693:7348,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1209:43481:21080,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1314:3920:24190,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2114:3338:11860,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2191:46903:25998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2305:14017:21164,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2473:34137:27904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1136:3993:1280 | . | NO_LDAS | 0.0609 | GT | 1.9656 | AG | 1.8062 | "[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:31269489-chr19:8848985 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 18 | ||||||
| PALLD--PPM1D | 18 | 1 | 18.0 | 1.0 | ONLY_REF_SPLICE | PALLD^ENSG00000129116.19 | chr4:168711923:+ | PPM1D^ENSG00000170836.12 | chr17:60656599:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:6008:23854,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:19680:14270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:40107:24485,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:36701:12280,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1456:11824:1813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1474:39889:10290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:49847:10584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2231:49961:6801,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2476:3322:22453,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:32098:14788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1215:11177:10837,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1239:21290:1841,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1273:26225:18151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1319:46191:17815,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1462:10991:17801,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2322:21921:16273,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2457:40204:15881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1228:35285:6577 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:44435:13373 | YES_LDAS | 0.0643 | GT | 1.6895 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr4--chr17]""]" | chr4:168711923-chr17:60656599 | False | 1 | PASS | 19 | ||||||||||
| HLA-A--C12orf40 | 17 | 0 | 17.0 | 0.0 | INCL_NON_REF_SPLICE | HLA-A^ENSG00000206503.13 | chr6:29942951:+ | C12orf40^ENSG00000180116.15 | chr12:39716794:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1108:6170:27834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1160:30836:7390,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:28555:5008,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1348:39662:9169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1448:4026:21402,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:43036:23980,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1483:32438:17871,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2202:44993:15124,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2291:47631:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:37300:17380,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1435:9664:6171,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2104:17940:11145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2218:13742:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2354:46021:12112,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2408:39808:12336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2481:50454:22929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1295:11104:7796 | . | NO_LDAS | 0.0575 | AT | 1.5656 | AC | 1.7056 | "[""INTERCHROMOSOMAL[chr6--chr12]""]" | chr6:29942951-chr12:39716794 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 17 | |||
| MIR4713HG--GLDN | 17 | 3 | 17.0 | 2.73 | ONLY_REF_SPLICE | MIR4713HG^ENSG00000259240.1 | chr15:51037681:+ | GLDN^ENSG00000186417.14 | chr15:51377449:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1143:25893:28142,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1228:32058:26797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2195:25990:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2206:10530:20393,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:25448:9099,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2281:47671:10991,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2310:32405:25718,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2373:33441:3690,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:49030:22369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:18393:15573,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:30051:8805,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:21702:25760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:46134:14578,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1263:48132:12798,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:16614:23223,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:25901:19384,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1333:2505:24765 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1159:46547:26586,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1394:47032:29529,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1277:23765:9435 | YES_LDAS | 0.0667 | GT | 1.9656 | AG | 1.8892 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr15:0.05Mb]"",""NEIGHBORS[47743]""]" | chr15:51037681-chr15:51377449 | False | 1 | PASS | 20 | ||||||||||
| RGSL1--MYOF | 16 | 0 | 8.0 | 0.0 | ONLY_REF_SPLICE | RGSL1^ENSG00000121446.20 | chr1:182507266:+ | MYOF^ENSG00000138119.17 | chr10:93452141:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:16266:7824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:48650:3494,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1145:20262:21920,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1169:38691:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:32964:11579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:41321:7558,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:32640:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:50980:3186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:38190:29179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1453:3920:28422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2104:14219:26502,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:47501:1617,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2154:4972:15307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2168:43149:28016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:35326:29375,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1145:42615:16498 | . | NO_LDAS | 0.0271 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:182507266-chr10:93452141 | False | 0 | Does | not | meet | inclusion | criteria | FAIL | 16 | |||||
| IGL@-ext--ZNF562 | 16 | 0 | 16.0 | 0.0 | INCL_NON_REF_SPLICE | IGL@-ext^IGL.g@-ext | chr22:22415614:+ | ZNF562^ENSG00000171466.10 | chr19:9660874:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2128:17924:12154,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:44864:16357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2156:7262:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2327:12269:26881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2336:45956:16540,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2420:14203:24877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2483:49516:1210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1137:35043:27287,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1385:19194:15951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1407:32786:18221,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1425:3904:22929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1493:50333:18768,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2397:30237:17955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2437:30326:4797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2456:43610:25283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2457:41830:10711 | . | NO_LDAS | 0.0541 | AC | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr19]""]" | chr22:22415614-chr19:9660874 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 16 | |||||||
| DPY19L1P1--MYOF | 16 | 0 | 8.0 | 0.0 | ONLY_REF_SPLICE | DPY19L1P1^ENSG00000229358.3 | chr7:32581572:- | MYOF^ENSG00000138119.17 | chr10:93452141:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:16266:7824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:48650:3494,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1145:20262:21920,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1169:38691:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:32964:11579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:41321:7558,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:32640:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:50980:3186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:38190:29179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1453:3920:28422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2104:14219:26502,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:47501:1617,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2154:4972:15307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2168:43149:28016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:35326:29375,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1145:42615:16498 | . | NO_LDAS | 0.0271 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:32581572-chr10:93452141 | False | 0 | Does | not | meet | inclusion | criteria | FAIL | 16 | |||||
| CMTM8--CMTM7 | 16 | 0 | 16.0 | 0.0 | ONLY_REF_SPLICE | CMTM8^ENSG00000170293.9 | chr3:32239119:+ | CMTM7^ENSG00000153551.14 | chr3:32441840:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:20529:8062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:40325:9926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1164:14955:14550,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1172:16816:9730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1358:21209:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2408:25238:24260,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:35221:26839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1339:36839:6801,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1376:12407:29557,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1474:31766:21528,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2152:24332:9127,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2265:31378:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2335:36523:5358,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2343:49661:4461,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2412:45819:26951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2418:51118:4685 | . | YES_LDAS | 0.0541 | GT | 1.9656 | AG | 1.9086 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[21377]""]" | chr3:32239119-chr3:32441840 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 16 | |||
| AGAP5--AC022400.4 | 16 | 1 | 15.5 | 1.0 | INCL_NON_REF_SPLICE | AGAP5^ENSG00000172650.14 | chr10:73692043:- | AC022400.4^ENSG00000272140.2 | chr10:73713332:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:28166:14059,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:46563:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1375:32899:18137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1443:33764:3830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1495:24437:15783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2136:46992:7123,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:48343:9912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2358:15101:7796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:24259:16960,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:49589:3887,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:20691:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1358:8451:24527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2182:29995:25073,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2267:11274:10276,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2367:37915:2135,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2398:28449:3788 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1477:46199:10430 | YES_LDAS | 0.0558 | GT | 1.7465 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5854]""]" | chr10:73692043-chr10:73713332 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 17 | |||
| ZNF625--AGRN | 15 | 0 | 15.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF625^ENSG00000257591.6 | chr19:12146098:- | AGRN^ENSG00000188157.15 | chr1:1051746:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:32066:7446,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2102:3597:12588,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:18984:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2124:18766:17282,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2205:35649:13065,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:41110:13387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:16598:19748,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2414:39792:11439,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:16233:8721,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:5450:27455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1425:28304:9029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2176:32600:21570,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2194:30140:12630,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2228:30318:26979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2424:42210:4671 | . | NO_LDAS | 0.0507 | GT | 1.8892 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:12146098-chr1:1051746 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 15 | |||||||
| RBBP4--C1QBP | 15 | 0 | 7.5 | 0.0 | ONLY_REF_SPLICE | RBBP4^ENSG00000162521.19 | chr1:32662337:+ | C1QBP^ENSG00000108561.8 | chr17:5434966:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:46684:12952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1470:5797:20071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1481:36005:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:9559:18824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:21120:11355,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2347:34460:25802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:33190:21836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2430:51692:6409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:31394:18053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:18256:18473,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:39112:27918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2369:44354:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:46385:4139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:20772:23924,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:20804:23924 | . | YES_LDAS | 0.0254 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:32662337-chr17:5434966 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 15 | |||||||
| CHSY1--AC090907.2 | 15 | 0 | 15.0 | 0.0 | ONLY_REF_SPLICE | CHSY1^ENSG00000131873.7 | chr15:101235082:- | AC090907.2^ENSG00000259755.1 | chr15:101050779:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1320:31871:29025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:42825:12742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:36208:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1445:22835:18782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2122:8580:11187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2231:12342:21402,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2266:33311:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:27082:22635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1163:39533:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1328:40139:13387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2347:35609:19833,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2388:34816:25662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2470:22608:8104,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1241:4835:27007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1321:35819:27063 | . | YES_LDAS | 0.0507 | GT | 1.8323 | AG | 1.6402 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr15:0.09Mb]"",""NEIGHBORS[89661]""]" | chr15:101235082-chr15:101050779 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 15 | |||
| AC015712.1--C1QBP | 15 | 0 | 7.5 | 0.0 | ONLY_REF_SPLICE | AC015712.1^ENSG00000232386.9 | chr15:100855348:+ | C1QBP^ENSG00000108561.8 | chr17:5434966:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:46684:12952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1470:5797:20071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1481:36005:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:9559:18824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:21120:11355,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2347:34460:25802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:33190:21836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2430:51692:6409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:31394:18053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:18256:18473,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:39112:27918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2369:44354:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:46385:4139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:20772:23924,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:20804:23924 | . | YES_LDAS | 0.0254 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr17]""]" | chr15:100855348-chr17:5434966 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 15 | |||||||
| PICALM--SYTL2 | 15 | 1 | 15.0 | 1.0 | ONLY_REF_SPLICE | PICALM^ENSG00000073921.18 | chr11:85974708:- | SYTL2^ENSG00000137501.17 | chr11:85758114:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:33417:12084,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1257:9365:8342,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:24647:5218,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:5069:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2290:19842:13793,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2122:18620:1813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2153:29841:16315,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2161:29210:1294,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2184:10336:2990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:30431:2149,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2270:29736:1925,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1103:38400:15475,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1104:12221:10907,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1124:17657:12308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1236:29598:24723 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:7407:13583 | YES_LDAS | 0.0541 | GT | 1.9086 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr11:0.15Mb]""]" | chr11:85974708-chr11:85758114 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 16 | |||
| BUB3--LINC02641 | 14 | 1 | 14.0 | 1.0 | ONLY_REF_SPLICE | BUB3^ENSG00000154473.18 | chr10:123162828:+ | LINC02641^ENSG00000230131.6 | chr10:123361319:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:8459:21122,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1205:7440:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:19154:18347,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:41248:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:13839:26208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2115:15287:19076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2271:45002:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2484:4552:11187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1175:5708:12995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:14891:23434,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1345:38174:19034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2119:5830:21808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2121:49637:1196,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2159:25157:21010 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2487:4964:25550 | YES_LDAS | 0.0508 | GT | 1.1589 | AG | 1.5058 | "[""INTRACHROMOSOMAL[chr10:0.19Mb]""]" | chr10:123162828-chr10:123361319 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 15 | |||
| LDLRAD3--PRR5L | 14 | 2 | 14.0 | 2.0 | INCL_NON_REF_SPLICE | LDLRAD3^ENSG00000179241.13 | chr11:36098461:+ | PRR5L^ENSG00000135362.14 | chr11:36296290:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1305:10336:13639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:43820:15391,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:8160:12868,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1347:24979:3354,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:47857:22831,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1481:21953:2766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:44451:1154,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:14308:9814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1101:12116:1673,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1259:25796:28114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1320:31993:26208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2171:2853:14298,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2363:16460:19398,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1152:11897:15419 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:11841:16245,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2288:1696:9463 | YES_LDAS | 0.0542 | GT | 1.9329 | AG | 1.8892 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr11:0.06Mb]"",""NEIGHBORS[64152]""]" | chr11:36098461-chr11:36296290 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 16 | |||
| SAMD5--SASH1 | 13 | 0 | 13.0 | 0.0 | ONLY_REF_SPLICE | SAMD5^ENSG00000203727.4 | chr6:147509387:+ | SASH1^ENSG00000111961.18 | chr6:148390134:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:8815:9043,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:29024:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:21573:11215,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1132:15578:23392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1174:2691:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1304:11582:1392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2130:4875:11916,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2142:1558:5470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2269:7650:29557,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2447:37640:28254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:35471:21780,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1255:29145:12616,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:35132:14466 | . | YES_LDAS | 0.044 | GT | 1.8295 | AG | 1.9219 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.70Mb]""]" | chr6:147509387-chr6:148390134 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 13 | |||
| RN7SL732P--RN7SL128P | 13 | 0 | 8.44 | 0.0 | INCL_NON_REF_SPLICE | RN7SL732P^ENSG00000264618.2 | chrX:39786593:- | RN7SL128P^ENSG00000240869.3 | chr6:20421837:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:38254:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:18248:27792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:51595:14087,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:30075:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2222:18329:20701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:23385:6479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:8944:22635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:47906:28660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2133:37567:19160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:38805:23125,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2278:9050:22004,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2341:14251:26614,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2475:9236:15685 | . | YES_LDAS | 0.0286 | GT | 1.8892 | AG | 1.7465 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chrX--chr6]""]" | chrX:39786593-chr6:20421837 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 13 | ||||||
| CHST11--MME | 13 | 0 | 13.0 | 0.0 | INCL_NON_REF_SPLICE | CHST11^ENSG00000171310.11 | chr12:104601991:+ | MME^ENSG00000196549.13 | chr3:155183570:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:7140:21808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:36418:24541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:2173:23966,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:12795:26727,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1498:41110:15573,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1124:25666:4994,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:45123:19580,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:38319:26657,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1330:42939:22271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1497:46644:2233,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2429:15740:21654,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1217:28466:9337,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1305:43181:28044 | . | NO_LDAS | 0.044 | GT | 1.7056 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:104601991-chr3:155183570 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 13 | ||||||
| BOLA2B--SMG1P2 | 13 | 1 | 13.0 | 0.57 | INCL_NON_REF_SPLICE | BOLA2B^ENSG00000169627.9 | chr16:30193358:- | SMG1P2^ENSG00000205534.6 | chr16:29548658:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1143:7359:28912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:6687:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:36232:9421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:4770:16694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2332:7917:26432,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:14219:22131,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2495:8208:6143,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1258:2667:15853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:2513:28674,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2338:16840:22747,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2449:37381:27245,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2483:28457:11453,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1214:44557:29501 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:44654:6493 | YES_LDAS | 0.0459 | GT | 1.9329 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.60Mb]""]" | chr16:30193358-chr16:29548658 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 14 | |||||||
| USP22--RHBDF2 | 12 | 0 | 12.0 | 0.0 | INCL_NON_REF_SPLICE | USP22^ENSG00000124422.12 | chr17:21002946:- | RHBDF2^ENSG00000129667.13 | chr17:76493111:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:20327:27217,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:4374:8020,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1410:15141:1897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:41757:12462,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2428:34072:15601,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1144:22843:29081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1297:22794:23560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1320:18127:4433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1372:28943:12602,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2301:33457:20757,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1220:33133:28296,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1279:27883:12336 | . | NO_LDAS | 0.0406 | GT | 0.9056 | AG | 1.2366 | "[""INTRACHROMOSOMAL[chr17:55.43Mb]""]" | chr17:21002946-chr17:76493111 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 12 | |||||||
| RPS3AP11--SEPTIN7 | 12 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | RPS3AP11^ENSG00000230116.1 | chr1:42491744:+ | SEPTIN7^ENSG00000122545.20 | chr7:35832798:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1185:46830:10739,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:3354:4069,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:8216:29361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1443:28506:15769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2134:21007:17661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:1623:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1130:14154:28156,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:46086:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:15069:13205,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1415:9527:22187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2164:43303:25031,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1248:3573:18824 | . | NO_LDAS | 0.0135 | GT | 1.9329 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:42491744-chr7:35832798 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 12 | ||||||
| RBM14--RBM4 | 12 | 0 | 12.0 | 0.0 | ONLY_REF_SPLICE | RBM14^ENSG00000239306.5 | chr11:66617057:+ | RBM4^ENSG00000173933.21 | chr11:66639700:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1183:40503:6283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1433:15505:1406,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1491:49467:5610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2261:26653:10514,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2356:51579:17563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2401:17496:10374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1151:7100:8034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:14980:24457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:2756:22060,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1422:40843:13093,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2166:49969:22845,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2430:8912:7418 | . | YES_LDAS | 0.0406 | GT | 1.7465 | AG | 1.9086 | "[""HGNC_GENEFAM"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[8733]""]" | chr11:66617057-chr11:66639700 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 12 | |||||||
| PKNOX2--MEIS3 | 12 | 0 | 12.0 | 0.0 | ONLY_REF_SPLICE | PKNOX2^ENSG00000165495.16 | chr11:125385722:+ | MEIS3^ENSG00000105419.18 | chr19:47417350:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1298:44201:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1458:30973:8497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1488:15441:18193,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:20909:20996,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2444:32171:11832,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1228:5975:18277,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1292:47105:11775,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1346:11137:1911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2105:9608:27399,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2291:36782:26208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2464:32381:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2468:48658:9562 | . | NO_LDAS | 0.0406 | GT | 1.9656 | AG | 1.9656 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:125385722-chr19:47417350 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 12 | |||
| HLA-L--HLA-V | 12 | 0 | 12.0 | 0.0 | ONLY_REF_SPLICE | HLA-L^ENSG00000243753.5 | chr6:30259697:+ | HLA-V^ENSG00000181126.13 | chr6:29792437:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1162:19947:15769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:39581:2724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:39872:7460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1274:5466:26979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:3597:17128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1461:48893:21010,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1486:47186:14662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2170:41232:13821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2194:20440:7796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:3920:7263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1336:23304:26853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2482:7569:12658 | . | YES_LDAS | 0.0406 | GT | 1.7056 | AG | 1.8323 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.46Mb]""]" | chr6:30259697-chr6:29792437 | True | "pair|MHC | complexes|HLA-V | HLA-L; | pair|recurrent | breakpoints" | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 12 |
| UBE2Q2P1--GOLGA2P6 | 11 | 0 | 11.0 | 0.0 | INCL_NON_REF_SPLICE | UBE2Q2P1^ENSG00000189136.9 | chr15:84435875:- | GOLGA2P6^ENSG00000241621.1 | chr10:30370881:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1111:40131:28478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1348:24954:18978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:41968:12686,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2295:45123:9519,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1142:48375:22327,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:42210:26642,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2153:9842:6787,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2295:21905:19160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2332:10061:1645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2420:5749:16231,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1302:20667:1631 | . | YES_LDAS | 0.0372 | GT | 1.9656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr15--chr10]""]" | chr15:84435875-chr10:30370881 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 11 | |||||||
| ACTR3C--AC092681.1 | 11 | 0 | 11.0 | 0.0 | INCL_NON_REF_SPLICE | ACTR3C^ENSG00000106526.10 | chr7:150284753:- | AC092681.1^ENSG00000224016.2 | chr7:149909705:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1354:43990:10108,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:5822:17366,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2218:21241:20057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:27535:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2278:18466:21584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2354:21759:15797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:25319:6185,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1210:32980:11411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1338:19275:11495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1141:4463:17591,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1277:36515:28941 | . | YES_LDAS | 0.0372 | GT | 1.9899 | AG | 1.9899 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.33Mb]""]" | chr7:150284753-chr7:149909705 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 11 | |||
| TLK2--AC240565.1 | 10 | 0 | 3.03 | 0.0 | ONLY_REF_SPLICE | TLK2^ENSG00000146872.18 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | chr17:106864:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:24372:1322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1341:49216:28856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1496:32616:1560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1496:5781:23714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:24526:5428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2394:26783:28422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1326:52056:22257,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:10684:8721,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1472:40390:8328,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2367:23571:8427 | . | YES_LDAS | 0.0103 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr17:62.34Mb]""]" | chr17:62560126-chr17:106864 | False | 1 | PASS | 10 | ||||||||||
| FUS--CTNNA1 | 10 | 0 | 10.0 | 0.0 | INCL_NON_REF_SPLICE | FUS^ENSG00000089280.19 | chr16:31184352:+ | CTNNA1^ENSG00000044115.21 | chr5:138934073:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1278:16937:16694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:3031:5470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:7723:18669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1333:17989:23195,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1469:32171:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:3783:1252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:15942:20491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2208:42558:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2489:29250:18571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1205:46458:15699 | . | NO_LDAS | 0.0338 | GT | 1.8062 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr16--chr5]""]" | chr16:31184352-chr5:138934073 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 10 | |||||||
| AC215522.2--AL627309.5 | 10 | 0 | 10.0 | 0.0 | ONLY_REF_SPLICE | AC215522.2^ENSG00000282572.2 | chr7:20834:- | AL627309.5^ENSG00000241860.7 | chr1:173862:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1183:37421:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:10190:11817,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1292:15991:2724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:45325:25676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2401:12585:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:45770:21962,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:45471:24891,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1430:38441:14284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2298:31750:25479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2359:18968:10374 | . | YES_LDAS | 0.0338 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:20834-chr1:173862 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 10 | |||||||
| AC073107.1--PSPH | 10 | 0 | 2.87 | 0.0 | ONLY_REF_SPLICE | AC073107.1^ENSG00000272693.4 | chr7:65770467:- | PSPH^ENSG00000146733.14 | chr7:56021231:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:11210:13023,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2127:47501:26166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:3799:22859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:45244:23994,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:47930:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2230:11574:8076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2251:48974:17843,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1131:28239:23041,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1227:13248:19580,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1279:16217:17717 | . | YES_LDAS | 0.0097 | GT | 1.9086 | AG | 1.9656 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:9.60Mb]""]" | chr7:65770467-chr7:56021231 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 10 | |||||||
| AC008740.1--CRYM-AS1 | 10 | 0 | 10.0 | 0.0 | ONLY_REF_SPLICE | AC008740.1^ENSG00000257403.2 | chr16:21352138:+ | CRYM-AS1^ENSG00000189149.12 | chr16:21315884:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:23134:13667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:1680:25830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1432:1502:23784,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:49718:7838,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2113:2327:8006,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2138:16266:25339,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2143:13580:7151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:32438:23784,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1265:14017:18529,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2321:17989:1617 | . | YES_LDAS | 0.0338 | GT | 1.7232 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]" | chr16:21352138-chr16:21315884 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 10 | |||
| WDR27--AL135910.1 | 10 | 1 | 10.0 | 0.67 | ONLY_REF_SPLICE | WDR27^ENSG00000184465.16 | chr6:169582836:- | AL135910.1^ENSG00000272848.2 | chr6:169430712:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1193:29372:5610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:10813:19650,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:10926:8525,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2253:2246:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:24744:28058,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2143:37235:1771,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2355:32365:6367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2437:42542:6815,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1156:35900:4839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:3912:27848 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:48610:7011 | YES_LDAS | 0.0361 | GT | 1.6729 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS[4737]""]" | chr6:169582836-chr6:169430712 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 11 | |||
| AC073529.1--MID1 | 10 | 1 | 10.0 | 0.83 | ONLY_REF_SPLICE | AC073529.1^ENSG00000234129.8 | chrX:11055936:- | MID1^ENSG00000101871.16 | chrX:10567603:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:33959:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:4131:17605,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:48092:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:7828:5512,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:49847:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1264:24445:6353,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1104:24623:22074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:33797:16133,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1223:30294:15951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1254:28377:2177 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1368:9592:21962 | YES_LDAS | 0.0366 | GT | 1.9219 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:0.01Mb]"",""NEIGHBORS[13924]""]" | chrX:11055936-chrX:10567603 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 11 | |||
| YAF2--RYBP | 9 | 0 | 9.0 | 0.0 | INCL_NON_REF_SPLICE | YAF2^ENSG00000015153.15 | chr12:42238155:- | RYBP^ENSG00000163602.11 | chr3:72446621:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1112:1607:28450,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1467:39670:29221,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1491:32867:8413,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2202:30658:9267,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:5344:20911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2221:17536:3606,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2330:18353:17633,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1260:51053:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1341:9535:11635 | . | YES_LDAS | 0.0304 | GT | 1.5656 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:42238155-chr3:72446621 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 9 | |||
| TMED3--MINAR1 | 9 | 0 | 9.0 | 0.0 | ONLY_REF_SPLICE | TMED3^ENSG00000166557.14 | chr15:79314005:+ | MINAR1^ENSG00000169330.9 | chr15:79456098:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1122:27673:16035,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1165:11396:19959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1197:31426:20435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:23061:24443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2290:47930:26180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2121:32341:23812,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2180:51894:16736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2367:10012:29165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1324:16355:1701 | . | YES_LDAS | 0.0304 | GT | 1.7968 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS[4904]""]" | chr15:79314005-chr15:79456098 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 9 | |||
| GUSBP13--NAIP | 9 | 0 | 1.5 | 0.0 | ONLY_REF_SPLICE | GUSBP13^ENSG00000198237.8 | chr5:69920867:+ | NAIP^ENSG00000249437.8 | chr5:71003857:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:8774:4097,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:28943:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1332:39816:19748,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1104:21888:16414,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2175:26629:11677,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2196:23288:18445,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2450:5166:13429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2476:35779:27021,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2479:13119:6325 | . | YES_LDAS | 0.0051 | GT | 1.9329 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr5:1.05Mb]""]" | chr5:69920867-chr5:71003857 | False | 1 | PASS | 9 | ||||||||||
| ATAD3B--AC124947.1 | 9 | 0 | 9.0 | 0.0 | ONLY_REF_SPLICE | ATAD3B^ENSG00000160072.20 | chr1:1477350:+ | AC124947.1^ENSG00000257252.6 | chr12:93339736:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:30779:25171,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1331:32648:17787,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1485:28627:13009,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2445:37648:24401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:39775:13765,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1428:16266:25732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1258:12245:12995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:38683:2457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:40325:10879 | . | NO_LDAS | 0.0304 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:1477350-chr12:93339736 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 9 | |||||||
| BOLA2B--SMG1P2 | 9 | 1 | 3.2 | 0.14 | ONLY_REF_SPLICE | BOLA2B^ENSG00000169627.9 | chr16:30193358:- | SMG1P2^ENSG00000205534.6 | chr16:29548762:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1122:2448:16820,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:49127:29403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:40261:7067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:38182:12686,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:49394:17927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2430:24218:19160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:8629:23658,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2118:37437:19440,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2174:41256:24961 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:44654:6493 | YES_LDAS | 0.0113 | GT | 1.9329 | AG | 1.9329 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.60Mb]""]" | chr16:30193358-chr16:29548762 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 10 | |||||||
| SLC7A5P1--SMG1 | 8 | 0 | 8.0 | 0.0 | ONLY_REF_SPLICE | SLC7A5P1^ENSG00000260727.2 | chr16:29613103:- | SMG1^ENSG00000157106.17 | chr16:18900044:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:50996:21178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2392:11315:10178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:46684:19118,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1387:37235:10654,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2304:2998:15307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2312:9422:26040,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2353:37413:11944,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2422:41118:22985 | . | YES_LDAS | 0.0271 | GT | 1.7465 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr16:10.69Mb]""]" | chr16:29613103-chr16:18900044 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 8 | |||||||
| SAMD5--AL033504.1 | 8 | 0 | 8.0 | 0.0 | ONLY_REF_SPLICE | SAMD5^ENSG00000203727.4 | chr6:147509387:+ | AL033504.1^ENSG00000227681.5 | chr6:147947472:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:2052:23392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:42793:10500,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1482:36313:12812,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1372:48901:25367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1443:23911:24569,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1451:35844:14326,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2495:48658:10178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1134:1785:3816 | . | YES_LDAS | 0.0271 | GT | 1.8295 | AG | 1.5058 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]" | chr6:147509387-chr6:147947472 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 8 | |||
| RN7SL564P--RN7SL128P | 8 | 0 | 1.41 | 0.0 | INCL_NON_REF_SPLICE | RN7SL564P^ENSG00000240606.3 | chr6:122745488:+ | RN7SL128P^ENSG00000240869.3 | chr6:20421837:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:38254:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2222:18329:20701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:23385:6479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:8944:22635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:7901:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:47906:28660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:38805:23125,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2475:9236:15685 | . | YES_LDAS | 0.0048 | GT | 1.8892 | AG | 1.7465 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:102.32Mb]""]" | chr6:122745488-chr6:20421837 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 8 | ||||||
| PLEC--NUTM2F | 8 | 0 | 1.6 | 0.0 | INCL_NON_REF_SPLICE | PLEC^ENSG00000178209.16 | chr8:143925564:- | NUTM2F^ENSG00000130950.14 | chr9:94325374:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:36005:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2334:13750:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:36256:22887 | . | NO_LDAS | 0.0054 | GT | 1.7465 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr8--chr9]""]" | chr8:143925564-chr9:94325374 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 8 | |||||||
| PLEC--IMPDH2 | 8 | 0 | 1.6 | 0.0 | INCL_NON_REF_SPLICE | PLEC^ENSG00000178209.16 | chr8:143925564:- | IMPDH2^ENSG00000178035.13 | chr3:49027844:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:36005:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2334:13750:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:36256:22887 | . | NO_LDAS | 0.0054 | GT | 1.7465 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chr3]""]" | chr8:143925564-chr3:49027844 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 8 | |||||||
| PLEC--CRX | 8 | 0 | 1.6 | 0.0 | INCL_NON_REF_SPLICE | PLEC^ENSG00000178209.16 | chr8:143925564:- | CRX^ENSG00000105392.16 | chr19:47839401:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:36005:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2334:13750:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:36256:22887 | . | NO_LDAS | 0.0054 | GT | 1.7465 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr8--chr19]""]" | chr8:143925564-chr19:47839401 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 8 | |||||||
| PLEC--AC109361.1 | 8 | 0 | 1.6 | 0.0 | INCL_NON_REF_SPLICE | PLEC^ENSG00000178209.16 | chr8:143925564:- | AC109361.1^ENSG00000249635.1 | chr4:106020963:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:36005:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2334:13750:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:36256:22887 | . | NO_LDAS | 0.0054 | GT | 1.7465 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr8--chr4]""]" | chr8:143925564-chr4:106020963 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 8 | |||||||
| PKD1P2--NPIPB12 | 8 | 0 | 1.15 | 0.0 | ONLY_REF_SPLICE | PKD1P2^ENSG00000227827.3 | chr16:16377056:+ | NPIPB12^ENSG00000169203.16 | chr16:29500083:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:20230:5834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1475:28741:3396,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2150:19898:19272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2183:14963:29361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2203:4576:9547,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2413:49969:26124,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2449:9859:6311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1193:33231:21906 | . | YES_LDAS | 0.0039 | GT | 1.8323 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr16:13.11Mb]""]" | chr16:16377056-chr16:29500083 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 8 | |||||||
| KLF7--KLF6 | 8 | 0 | 8.0 | 0.0 | ONLY_REF_SPLICE | KLF7^ENSG00000118263.15 | chr2:207088458:- | KLF6^ENSG00000067082.15 | chr10:3779590:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:1955:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2358:4681:14886,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2421:3095:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1164:17107:6955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1339:11274:27119,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1433:49500:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2333:25869:9576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2490:1971:5148 | . | YES_LDAS | 0.0271 | GT | 1.7819 | AG | 1.7465 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:207088458-chr10:3779590 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 8 | ||||||
| FBXO31--C16orf95 | 8 | 0 | 8.0 | 0.0 | ONLY_REF_SPLICE | FBXO31^ENSG00000103264.18 | chr16:87333886:- | C16orf95^ENSG00000260456.7 | chr16:87315823:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:37809:23392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1297:35738:3859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2268:38141:12588,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2346:38772:3508,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:26306:25970,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:19866:1645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:26079:13303,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2413:42170:8020 | . | YES_LDAS | 0.0271 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[9567]""]" | chr16:87333886-chr16:87315823 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 8 | |||||||
| EIF4E3--FOXP1 | 8 | 0 | 8.0 | 0.0 | ONLY_REF_SPLICE | EIF4E3^ENSG00000163412.13 | chr3:71690010:- | FOXP1^ENSG00000114861.23 | chr3:71493555:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2101:12561:2051,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2126:47598:17899,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2217:31176:29053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2419:17811:4923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:38473:28100,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1392:36378:6507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1143:6720:27385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1167:49435:11019 | . | YES_LDAS | 0.0271 | GT | 1.7056 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr3:0.09Mb]"",""NEIGHBORS[91425]""]" | chr3:71690010-chr3:71493555 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 8 | |||
| CPSF6--GRM8 | 8 | 0 | 8.0 | 0.0 | INCL_NON_REF_SPLICE | CPSF6^ENSG00000111605.18 | chr12:69262562:+ | GRM8^ENSG00000179603.18 | chr7:126445313:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1131:42866:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:30771:20645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1456:31273:9828,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:46361:25115,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:40439:14466,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:6234:16680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2156:3791:17885,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2253:19049:26741 | . | NO_LDAS | 0.0271 | GT | 1.9899 | AG | 1.8256 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:69262562-chr7:126445313 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 8 | ||||||
| CFAP74--ST7 | 8 | 0 | 8.0 | 0.0 | INCL_NON_REF_SPLICE | CFAP74^ENSG00000142609.18 | chr1:1922177:- | ST7^ENSG00000004866.22 | chr7:117119693:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1195:16832:29291,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:17665:4895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1388:11396:22201,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2245:38287:26769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1377:24696:17745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2275:21735:24611,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2406:30108:24709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2424:11954:12098 | . | NO_LDAS | 0.0271 | AT | 1.8295 | AC | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:1922177-chr7:117119693 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 8 | |||||||
| TVP23C--CDRT4 | 8 | 1 | 8.0 | 1.0 | INCL_NON_REF_SPLICE | TVP23C^ENSG00000175106.17 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | chr17:15440285:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1398:8030:24919,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2120:47873:12042,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2303:6404:25465,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:16606:10570,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1265:8993:23223,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2327:26686:9421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1104:25424:10178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:38902:21976 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:11412:25564 | YES_LDAS | 0.0305 | GT | 1.9329 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr17:0.03Mb]"",""NEIGHBORS[26536]""]" | chr17:15503098-chr17:15440285 | False | 0 | Does | not | meet | inclusion | criteria | FAIL | 9 | |||||
| AC211476.4--CCDC146 | 8 | 1 | 2.67 | 0.07 | ONLY_REF_SPLICE | AC211476.4^ENSG00000277125.1 | chr7:73072670:+ | CCDC146^ENSG00000135205.15 | chr7:77236947:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1135:7553:5792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2346:32130:1112,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:6542:22957,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:44985:28450,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1155:45956:14298,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1188:20675:22383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:36628:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1498:40698:5134 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2147:9770:2962 | YES_LDAS | 0.0092 | GT | 1.8323 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr7:4.05Mb]""]" | chr7:73072670-chr7:77236947 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 9 | ||||||
| RMND5A--ANAPC1P2 | 7 | 0 | 7.0 | 0.0 | ONLY_REF_SPLICE | RMND5A^ENSG00000153561.13 | chr2:86741069:+ | ANAPC1P2^ENSG00000231259.5 | chr2:87052992:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1307:10894:8973,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:15813:15026,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2476:40649:8833,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1192:3330:29333,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1273:32147:28016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1115:27244:10949,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:36992:15391 | . | YES_LDAS | 0.0237 | GT | 1.8295 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr2:0.25Mb]""]" | chr2:86741069-chr2:87052992 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 7 | ||||||
| RIMKLA--CAMSAP1 | 7 | 0 | 7.0 | 0.0 | INCL_NON_REF_SPLICE | RIMKLA^ENSG00000177181.15 | chr1:42419655:+ | CAMSAP1^ENSG00000130559.19 | chr9:135883078:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1404:6768:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:5894:9421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:49783:10136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1161:34218:23111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1439:20554:11467,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:14696:12364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2448:41450:23924 | . | NO_LDAS | 0.0237 | GT | 1.9899 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:42419655-chr9:135883078 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 7 | ||||||
| OR51M1--ABR | 7 | 0 | 7.0 | 0.0 | INCL_NON_REF_SPLICE | OR51M1^ENSG00000184698.5 | chr11:5392729:+ | ABR^ENSG00000159842.15 | chr17:1100735:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1360:4018:14494,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1389:22212:26614,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2281:43222:14270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:19397:12714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1183:48585:12322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:28522:20813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1307:49839:18501 | . | YES_LDAS | 0.0237 | GT | 1.9656 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr11--chr17]""]" | chr11:5392729-chr17:1100735 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 7 | |||||||
| EIF1AXP1--PDE4DIPP9 | 7 | 0 | 7.0 | 0.0 | INCL_NON_REF_SPLICE | EIF1AXP1^ENSG00000236698.1 | chr1:16686040:- | PDE4DIPP9^ENSG00000230239.1 | chr1:16859049:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1291:6299:20771,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2324:13548:17436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2470:20885:25409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:47081:25998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:11849:4265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2152:48820:24751,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:5757:4755 | . | YES_LDAS | 0.0237 | GT | 1.8295 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:0.17Mb]""]" | chr1:16686040-chr1:16859049 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 7 | |||||||
| CCDC74A--PTPN12 | 7 | 0 | 7.0 | 0.0 | ONLY_REF_SPLICE | CCDC74A^ENSG00000163040.15 | chr2:131528627:+ | PTPN12^ENSG00000127947.16 | chr7:77585543:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:16371:28604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:42752:21164,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1441:34711:21640,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:25966:23672,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:46700:20267,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2393:43691:25367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1119:40148:11551 | . | YES_LDAS | 0.0237 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:131528627-chr7:77585543 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 7 | |||
| BICD2--EEF1DP2 | 7 | 0 | 7.0 | 0.0 | INCL_NON_REF_SPLICE | BICD2^ENSG00000185963.14 | chr9:92764505:- | EEF1DP2^ENSG00000226721.2 | chr9:92837729:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:19429:22215,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2214:21791:22859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2260:5854:15769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2292:18758:23238,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2437:48092:19650,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:31038:12112,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1134:14664:11635 | . | YES_LDAS | 0.0237 | GT | 1.7819 | AG | 1.5058 | "[""INTRACHROMOSOMAL[chr9:0.07Mb]"",""LOCAL_REARRANGEMENT:-:[71993]""]" | chr9:92764505-chr9:92837729 | False | 0 | Read | count | too | low: | 7 | < | 8 | FAIL | 7 | |||
| MIR4713HG--GLDN | 7 | 1 | 7.0 | 0.27 | ONLY_REF_SPLICE | MIR4713HG^ENSG00000259240.1 | chr15:51037681:+ | GLDN^ENSG00000186417.14 | chr15:51383785:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1213:1283:25564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2143:40698:1631,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1147:30456:20603,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:7205:6955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1329:27559:1883,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2255:25092:11369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2343:4762:12280 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1159:46547:26586 | YES_LDAS | 0.0246 | GT | 1.9656 | AG | 1.7056 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr15:0.05Mb]"",""NEIGHBORS[47743]""]" | chr15:51037681-chr15:51383785 | False | 1 | PASS | 8 | ||||||||||
| TLK2P1--AC110079.1 | 6 | 0 | 3.9 | 0.0 | INCL_NON_REF_SPLICE | TLK2P1^ENSG00000226049.3 | chr17:34039043:- | AC110079.1^ENSG00000260404.3 | chr4:118595912:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:12431:24443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1106:20117:9281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1326:52056:22257,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1338:50940:11327,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:10684:8721,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1472:40390:8328 | . | YES_LDAS | 0.0132 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr4]""]" | chr17:34039043-chr4:118595912 | False | 0 | Read | count | too | low: | 6 | < | 8 | FAIL | 6 | |||
| RPL23AP53--SEPTIN14 | 6 | 0 | 6.0 | 0.0 | ONLY_REF_SPLICE | RPL23AP53^ENSG00000223508.5 | chr8:232129:- | SEPTIN14^ENSG00000154997.9 | chr7:55796092:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1187:8524:9127,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1435:31750:13877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2164:36280:16820,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2448:25553:7572,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2459:52048:15713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1141:32203:17913 | . | YES_LDAS | 0.0203 | GT | 1.9086 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:232129-chr7:55796092 | True | aih_curated_blacklist | score(5) | 0 | aih_curated_blacklist | score(5) | FAIL | 6 | ||||||
| RN7SL828P--RN7SL4P | 6 | 0 | 1.47 | 0.0 | INCL_NON_REF_SPLICE | RN7SL828P^ENSG00000272075.2 | chr11:118067471:+ | RN7SL4P^ENSG00000263740.2 | chr3:15738565:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1253:35043:23336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2392:25966:27988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:9867:18880,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:16468:1084,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:47906:28660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1126:26249:29235 | . | NO_LDAS | 0.005 | GT | 1.8892 | AG | 1.7968 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:118067471-chr3:15738565 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 6 | ||||||
| RBM14--C11orf80 | 6 | 0 | 6.0 | 0.0 | ONLY_REF_SPLICE | RBM14^ENSG00000239306.5 | chr11:66617057:+ | C11orf80^ENSG00000173715.18 | chr11:66759043:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:12512:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2148:39492:18095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:25861:15166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1152:33222:15138,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1407:40180:10290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1142:8321:18389 | . | YES_LDAS | 0.0203 | GT | 1.7465 | AG | 1.9656 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.11Mb]""]" | chr11:66617057-chr11:66759043 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 6 | |||
| PCGF6--MNX1 | 6 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | PCGF6^ENSG00000156374.16 | chr10:103350983:- | MNX1^ENSG00000130675.15 | chr7:157005174:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:14365:14228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:14446:24316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:28555:3943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1196:41086:2780,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1345:51352:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1377:26362:26152 | . | NO_LDAS | 0.0101 | GT | 1.2419 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:103350983-chr7:157005174 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 6 | |||||||
| PCGF6--C10orf99 | 6 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | PCGF6^ENSG00000156374.16 | chr10:103350983:- | C10orf99^ENSG00000188373.5 | chr10:84184831:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:14365:14228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:14446:24316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:28555:3943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1196:41086:2780,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1345:51352:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1377:26362:26152 | . | NO_LDAS | 0.0101 | GT | 1.2419 | AG | 1.231 | "[""INTRACHROMOSOMAL[chr10:19.12Mb]""]" | chr10:103350983-chr10:84184831 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 6 | |||||||
| PAXBP1--GOLGA8A | 6 | 0 | 6.0 | 0.0 | INCL_NON_REF_SPLICE | PAXBP1^ENSG00000159086.15 | chr21:32771321:- | GOLGA8A^ENSG00000175265.17 | chr15:34381856:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1447:49224:2387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2210:7076:4265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2257:40795:27385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1136:20359:9477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1246:22285:19538,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2489:3637:3354 | . | NO_LDAS | 0.0203 | GT | 1.2867 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr21--chr15]""]" | chr21:32771321-chr15:34381856 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 6 | |||||||
| NPM1--NMD3P2 | 6 | 0 | 6.0 | 0.0 | INCL_NON_REF_SPLICE | NPM1^ENSG00000181163.14 | chr5:171392978:+ | NMD3P2^ENSG00000231504.1 | chr7:56502379:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1397:41790:14340,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1128:44346:10304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:26419:12406,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2303:17229:15993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2355:21694:22018,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2427:34282:12798 | . | NO_LDAS | 0.0203 | GT | 1.5219 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chr7]""]" | chr5:171392978-chr7:56502379 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 6 | |||||||
| NONO--KAT6A | 6 | 0 | 6.0 | 0.0 | INCL_NON_REF_SPLICE | NONO^ENSG00000147140.17 | chrX:71290778:+ | KAT6A^ENSG00000083168.11 | chr8:41933275:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1128:43141:25311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:49273:3396,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2287:19987:23209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2315:33036:18571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:46458:21948,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1323:51643:23588 | . | NO_LDAS | 0.0203 | GC | 1.7819 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chrX--chr8]""]" | chrX:71290778-chr8:41933275 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 6 | ||||||
| NME2--NME1 | 6 | 0 | 6.0 | 0.0 | ONLY_REF_SPLICE | NME2^ENSG00000243678.12 | chr17:51168343:+ | NME1^ENSG00000239672.8 | chr17:51161160:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1110:21427:20295,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2402:41296:24415,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1156:41232:18025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1477:7480:2415,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1196:43157:18389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1298:37259:13135 | . | YES_LDAS | 0.0203 | GT | 1.8062 | AG | 1.5546 | "[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3007]""]" | chr17:51168343-chr17:51161160 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 6 | |||||||
| MT-ND6--MTRNR2L12 | 6 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | MT-ND6^ENSG00000198695.2 | chrM:14150:- | MTRNR2L12^ENSG00000269028.3 | chr3:96617452:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:33311:20393,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2243:45414:7502,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1457:30391:25704,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2185:41668:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2387:17075:10374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:38869:18810 | . | YES_LDAS | 0.0101 | GT | 1.8295 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chrM--chr3]""]" | chrM:14150-chr3:96617452 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 6 | ||||||
| HLA-C--NUMA1 | 6 | 0 | 6.0 | 0.0 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269493:- | NUMA1^ENSG00000137497.18 | chr11:72013673:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1344:41507:5386,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:30148:3760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:4673:17983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2443:36475:22565,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2186:32292:3830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:22293:28660 | . | NO_LDAS | 0.0203 | GT | 1.8256 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr6--chr11]""]" | chr6:31269493-chr11:72013673 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 6 | |||
| EIF3C--NPIPB13 | 6 | 0 | 6.0 | 0.0 | INCL_NON_REF_SPLICE | EIF3C^ENSG00000184110.15 | chr16:28735582:+ | NPIPB13^ENSG00000198064.13 | chr16:30245853:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:37526:26909,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:5983:28044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1472:32769:12504,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2159:43044:17240,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:42097:8370,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1319:29210:29347 | . | YES_LDAS | 0.0203 | GT | 1.9086 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr16:1.49Mb]""]" | chr16:28735582-chr16:30245853 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 6 | |||||||
| BNIP3L--DPYSL2 | 6 | 0 | 6.0 | 0.0 | ONLY_REF_SPLICE | BNIP3L^ENSG00000104765.16 | chr8:26408376:+ | DPYSL2^ENSG00000092964.18 | chr8:26581969:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1258:31467:15208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2141:34258:24134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2362:25586:21304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2410:3136:21374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1203:11946:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1226:16670:6030 | . | YES_LDAS | 0.0203 | GT | 1.6402 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS[8395]""]" | chr8:26408376-chr8:26581969 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 6 | |||||||
| AC233699.1--TBC1D3 | 6 | 0 | 0.22 | 0.0 | ONLY_REF_SPLICE | AC233699.1^ENSG00000261499.2 | chr17:36320547:+ | TBC1D3^ENSG00000274611.3 | chr17:38191030:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1190:33894:14452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1320:23733:3606,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1455:29485:7095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2191:6453:17927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1495:22762:8595,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1302:12771:27609 | . | YES_LDAS | 0.0007 | GT | 1.9329 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr17:1.86Mb]""]" | chr17:36320547-chr17:38191030 | False | 0 | Read | count | too | low: | 6 | < | 8 | FAIL | 6 | |||
| PKD1--NPIPA3 | 6 | 1 | 4.96 | 0.83 | ONLY_REF_SPLICE | PKD1^ENSG00000008710.20 | chr16:2097868:- | NPIPA3^ENSG00000224712.12 | chr16:14716068:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1282:32381:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1360:25723:25802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2379:29315:10556,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1255:5005:12448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1280:40568:19202,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1225:2222:3480 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:40188:14228 | YES_LDAS | 0.0196 | GT | 1.8323 | AG | 1.8892 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:12.57Mb]""]" | chr16:2097868-chr16:14716068 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 7 | |||||||
| LINC00511--SLC39A11 | 6 | 1 | 6.0 | 1.0 | ONLY_REF_SPLICE | LINC00511^ENSG00000227036.8 | chr17:72592203:- | SLC39A11^ENSG00000133195.11 | chr17:72649268:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:30771:6997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2342:7788:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1475:23660:12840,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2242:23798:21038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2349:11525:13681,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1228:38182:21178 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:3136:22747 | YES_LDAS | 0.0237 | GT | 1.8892 | AG | 1.9086 | "[""DEEPEST2019"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5477]""]" | chr17:72592203-chr17:72649268 | False | 0 | Read | count | too | low: | 7 | < | 8 | FAIL | 7 | |||
| SLC7A5--SMG1P1 | 6 | 5 | 3.0 | 1.36 | ONLY_REF_SPLICE | SLC7A5^ENSG00000103257.9 | chr16:87868885:- | SMG1P1^ENSG00000237296.9 | chr16:22454702:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:24340:4265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1120:32349:27105,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1144:1251:20631,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1404:44249:27567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2282:13637:24401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2297:50033:1238 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:9616:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:47873:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:15764:22425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:49435:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2395:36669:28030 | YES_LDAS | 0.0147 | GT | 1.5301 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:65.34Mb]""]" | chr16:87868885-chr16:22454702 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 11 | |||
| SSBP1--MGAM | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | SSBP1^ENSG00000106028.11 | chr7:141750384:+ | MGAM^ENSG00000257335.8 | chr7:142005529:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:12908:26979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:18337:13345,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:42008:12532,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:5045:26082,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2438:16233:22537 | . | YES_LDAS | 0.0169 | GT | 1.8295 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr7:0.12Mb]""]" | chr7:141750384-chr7:142005529 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 5 | |||||||
| RN7SL303P--RN7SL4P | 5 | 0 | 2.38 | 0.0 | INCL_NON_REF_SPLICE | RN7SL303P^ENSG00000240116.3 | chr8:22978059:+ | RN7SL4P^ENSG00000263740.2 | chr3:15738565:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:11590:4013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2158:49297:14312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:22916:1883,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1126:26249:29235,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1187:11234:2359 | . | NO_LDAS | 0.0081 | GT | 1.8892 | AG | 1.7968 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr8--chr3]""]" | chr8:22978059-chr3:15738565 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 5 | ||||||
| RAB38--AP000676.5 | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | RAB38^ENSG00000123892.12 | chr11:88149675:- | AP000676.5^ENSG00000285835.1 | chr11:87954906:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1475:36628:14368,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2387:9899:8959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2441:24162:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1181:36135:22285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1333:49346:18768 | . | YES_LDAS | 0.0169 | GT | 1.6729 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr11:0.07Mb]"",""NEIGHBORS[67643]""]" | chr11:88149675-chr11:87954906 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 5 | |||||||
| PINX1--RP1L1 | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | PINX1^ENSG00000254093.9 | chr8:10826152:- | RP1L1^ENSG00000183638.6 | chr8:10623220:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2353:13475:25185,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:29776:21164,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1419:12415:22229,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2264:24849:6044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1243:42866:26012 | . | YES_LDAS | 0.0169 | GT | 1.7232 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]" | chr8:10826152-chr8:10623220 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 5 | |||||||
| LINC02210--CRHR1 | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | LINC02210^ENSG00000204650.14 | chr17:45630158:+ | CRHR1^ENSG00000120088.15 | chr17:45807010:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1295:1218:8497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:46183:3564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:43780:6689,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2495:42833:22621,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2307:23830:19048 | . | YES_LDAS | 0.0169 | GT | 1.8323 | AG | 1.4295 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:45630158-chr17:45807010 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| HIGD1A--HIGD1AP4 | 5 | 0 | 5.0 | 0.0 | INCL_NON_REF_SPLICE | HIGD1A^ENSG00000181061.14 | chr3:42785252:- | HIGD1AP4^ENSG00000233299.1 | chr2:223398338:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2134:8629:3648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:47590:3536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1430:16816:4881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2183:26225:14788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1260:34768:16498 | . | YES_LDAS | 0.0169 | GT | 1.9086 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr3--chr2]""]" | chr3:42785252-chr2:223398338 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| EXOC4--LRGUK | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | EXOC4^ENSG00000131558.15 | chr7:134007835:+ | LRGUK^ENSG00000155530.3 | chr7:134163397:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:1162:11257,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2329:12739:16596,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:6210:26558,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1213:42041:9926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1309:21799:1631 | . | YES_LDAS | 0.0169 | GT | 1.9899 | AG | 1.8295 | "[""Klijn_CellLines"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[60710]""]" | chr7:134007835-chr7:134163397 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| ESRRB--AC016526.2 | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | ESRRB^ENSG00000119715.15 | chr14:76310916:+ | AC016526.2^ENSG00000258454.1 | chr14:76252051:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:23045:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1455:3111:13541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2440:43659:4181,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:11574:2107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1266:38958:9940 | . | YES_LDAS | 0.0169 | GT | 1.7465 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""LOCAL_REARRANGEMENT:+:[47238]""]" | chr14:76310916-chr14:76252051 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 5 | |||
| CNTNAP3C--BX005040.4 | 5 | 0 | 5.0 | 0.0 | INCL_NON_REF_SPLICE | CNTNAP3C^ENSG00000283378.1 | chr9:61453030:+ | BX005040.4^ENSG00000283541.1 | chr9:61097036:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:41377:12616,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2448:48901:11159,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:30941:14017,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1273:5369:6353,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1193:29501:7011 | . | YES_LDAS | 0.0169 | GT | 1.8295 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61453030-chr9:61097036 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| AC091057.4--AC091057.6 | 5 | 0 | 5.0 | 0.0 | INCL_NON_REF_SPLICE | AC091057.4^ENSG00000284783.1 | chr15:30750556:+ | AC091057.6^ENSG00000285035.1 | chr15:30716220:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2167:21549:4167,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1173:39290:28870,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:7723:24050,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1210:20092:9912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2187:44694:10290 | . | YES_LDAS | 0.0169 | GT | 1.8892 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr15:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[26911]""]" | chr15:30750556-chr15:30716220 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 5 | |||
| CA13--CA3 | 5 | 1 | 5.0 | 0.83 | INCL_NON_REF_SPLICE | CA13^ENSG00000185015.8 | chr8:85281639:+ | CA3^ENSG00000164879.7 | chr8:85439712:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1116:1615:20057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1177:48780:12854,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:30787:9435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1318:17617:18908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1488:12083:23027 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2138:16023:10150 | YES_LDAS | 0.0197 | GT | 1.7968 | AG | 1.8892 | "[""DGD_PARALOGS"",""ConjoinG"",""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[89363]""]" | chr8:85281639-chr8:85439712 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 6 | |||
| AC114763.1--NXPH2 | 5 | 1 | 5.0 | 0.83 | ONLY_REF_SPLICE | AC114763.1^ENSG00000228043.5 | chr2:138500755:- | NXPH2^ENSG00000144227.5 | chr2:138671665:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:37413:25171,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1308:38756:3144,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1395:41499:17254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1403:44540:10416,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1130:17415:9141 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2221:32527:10682 | YES_LDAS | 0.0197 | GT | 1.8892 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr2:0.17Mb]""]" | chr2:138500755-chr2:138671665 | False | 0 | Read | count | too | low: | 6 | < | 8 | FAIL | 6 | |||
| SLC7A5--SMG1P1 | 5 | 5 | 2.5 | 1.14 | ONLY_REF_SPLICE | SLC7A5^ENSG00000103257.9 | chr16:87868885:- | SMG1P1^ENSG00000237296.9 | chr16:22451620:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:38368:20407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1221:23822:7460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2297:37712:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2348:18337:17857,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:44023:4391 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:9616:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:47873:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:15764:22425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:49435:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2395:36669:28030 | YES_LDAS | 0.0124 | GT | 1.5301 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:65.34Mb]""]" | chr16:87868885-chr16:22451620 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 10 | |||
| TAS2R14--PRR4 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | TAS2R14^ENSG00000212127.6 | chr12:11034782:- | PRR4^ENSG00000111215.12 | chr12:10848407:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:34590:9576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1378:24299:6773,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2397:25480:22495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1148:39047:14914 | . | YES_LDAS | 0.0135 | GT | 1.6402 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr12:0.09Mb]"",""NEIGHBORS[87933]""]" | chr12:11034782-chr12:10848407 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| SYN2--PPARG | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | SYN2^ENSG00000157152.17 | chr3:12183372:+ | PPARG^ENSG00000132170.23 | chr3:12379704:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:44904:23742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:50300:2261,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2177:47501:29109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1150:29226:10206 | . | YES_LDAS | 0.0135 | GT | 1.6729 | AG | 1.9329 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.10Mb]"",""NEIGHBORS[95336]""]" | chr3:12183372-chr3:12379704 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| SMIM13--STIL | 4 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SMIM13^ENSG00000224531.6 | chr6:11094389:+ | STIL^ENSG00000123473.16 | chr1:47313156:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:40358:25367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1172:47679:22831,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1431:35091:6016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1110:4827:6815 | . | NO_LDAS | 0.0068 | GT | 1.6895 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:11094389-chr1:47313156 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| PPP1R7--PAEP | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | PPP1R7^ENSG00000115685.15 | chr2:241169867:+ | PAEP^ENSG00000122133.17 | chr9:135566192:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:15505:7516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2277:14866:19524,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:9575:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1130:27737:11159 | . | YES_LDAS | 0.0135 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:241169867-chr9:135566192 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| LINC02728--GAB2 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | LINC02728^ENSG00000251323.3 | chr11:78425337:- | GAB2^ENSG00000033327.13 | chr11:78280901:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1227:29453:29515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2114:34541:18263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2139:40406:22088,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1436:29655:13079 | . | YES_LDAS | 0.0135 | GT | 1.8892 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[5634]""]" | chr11:78425337-chr11:78280901 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| INTS9-AS1--WDR37 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | INTS9-AS1^ENSG00000254034.2 | chr8:28798641:+ | WDR37^ENSG00000047056.16 | chr10:1080011:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:42486:12210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2360:28999:10542,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1283:19194:12644,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1430:24429:26250 | . | YES_LDAS | 0.0135 | GT | 1.9329 | AG | 1.8892 | "[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr8--chr10]""]" | chr8:28798641-chr10:1080011 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| HULC--AGAP5 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | HULC^ENSG00000285219.2 | chr6:8547214:+ | AGAP5^ENSG00000172650.14 | chr10:73697720:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:28757:11944,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:15505:25872,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:32478:19230,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1175:47784:14466 | . | NO_LDAS | 0.0135 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr6--chr10]""]" | chr6:8547214-chr10:73697720 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| GOLGA6L5P--GOLGA6B | 4 | 0 | 0.41 | 0.0 | ONLY_REF_SPLICE | GOLGA6L5P^ENSG00000230373.8 | chr15:84514915:- | GOLGA6B^ENSG00000215186.6 | chr15:72658558:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:6161:1897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:14680:1939,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2479:28830:5204,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1225:35051:23882 | . | YES_LDAS | 0.0014 | GT | 1.9656 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr15:11.84Mb]""]" | chr15:84514915-chr15:72658558 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| GDAP1--MIR2052HG | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | GDAP1^ENSG00000104381.14 | chr8:74363053:+ | MIR2052HG^ENSG00000254349.6 | chr8:74612853:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1216:12148:16049,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1449:22107:21892,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1480:41774:25101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1121:50786:6325 | . | YES_LDAS | 0.0135 | GT | 1.7465 | AG | 1.9219 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.08Mb]"",""NEIGHBORS[81768]""]" | chr8:74363053-chr8:74612853 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| FBXO25--AC240565.1 | 4 | 0 | 0.94 | 0.0 | ONLY_REF_SPLICE | FBXO25^ENSG00000147364.17 | chr8:435707:+ | AC240565.1^ENSG00000280136.2 | chr17:106864:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1463:29865:22551,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2402:45455:3424,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1207:47574:19847,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1332:14049:4377 | . | YES_LDAS | 0.0032 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr8--chr17]""]" | chr8:435707-chr17:106864 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| DENND6B--CDC14A | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | DENND6B^ENSG00000205593.12 | chr22:50316025:- | CDC14A^ENSG00000079335.20 | chr1:100352508:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1489:23636:19440,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:22916:16343,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1405:3556:28912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2284:25545:14116 | . | NO_LDAS | 0.0135 | GT | 1.9656 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:50316025-chr1:100352508 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 4 | |||||||
| CMTM8--CMTM7 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | CMTM8^ENSG00000170293.9 | chr3:32239119:+ | CMTM7^ENSG00000153551.14 | chr3:32449454:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:36758:1392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2107:37680:23952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2113:20974:8356,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2162:49038:18964 | . | YES_LDAS | 0.0135 | GT | 1.9656 | AG | 1.9329 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[21377]""]" | chr3:32239119-chr3:32449454 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 4 | ||||||
| CCDC30--NUP85 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | CCDC30^ENSG00000186409.18 | chr1:42521256:+ | NUP85^ENSG00000125450.11 | chr17:75231340:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1402:3896:9828,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1375:31160:6044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1208:20950:13947,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1292:39088:21290 | . | YES_LDAS | 0.0135 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:42521256-chr17:75231340 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| BX276092.9--AIFM2 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | BX276092.9^ENSG00000283599.2 | chrX:71668095:+ | AIFM2^ENSG00000042286.15 | chr10:70132789:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:28749:20141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:35844:23882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2130:13127:25956,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:29760:5134 | . | NO_LDAS | 0.0135 | GT | 1.8062 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chrX--chr10]""]" | chrX:71668095-chr10:70132789 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 4 | |||||||
| BX005040.4--CNTNAP3C | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | BX005040.4^ENSG00000283541.1 | chr9:61096836:- | CNTNAP3C^ENSG00000283378.1 | chr9:61425702:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:36030:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1391:17860:26755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2119:7941:24793,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1148:4301:15461 | . | YES_LDAS | 0.0135 | GT | 1.8062 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61096836-chr9:61425702 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| BCKDHB--AL359715.4 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | BCKDHB^ENSG00000083123.15 | chr6:80273221:+ | AL359715.4^ENSG00000279022.1 | chr6:80440685:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2357:27284:5834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1441:37672:18866,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2398:40730:15110,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1281:2027:20295 | . | YES_LDAS | 0.0135 | GT | 1.9899 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[94460]""]" | chr6:80273221-chr6:80440685 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| AP003108.2--PPP1R32 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | AP003108.2^ENSG00000256591.5 | chr11:61430182:+ | PPP1R32^ENSG00000162148.11 | chr11:61481782:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:34331:24989,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1410:47404:18095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2143:43699:24821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1261:46749:26572 | . | YES_LDAS | 0.0135 | GT | 1.8256 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[12404]""]" | chr11:61430182-chr11:61481782 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| ANAPC1--RMND5A | 4 | 0 | 1.33 | 0.0 | ONLY_REF_SPLICE | ANAPC1^ENSG00000153107.13 | chr2:111815370:- | RMND5A^ENSG00000153561.13 | chr2:86740927:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:11922:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1421:32324:1224,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2394:33975:22187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1328:36103:7516 | . | YES_LDAS | 0.0045 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr2:24.83Mb]""]" | chr2:111815370-chr2:86740927 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| ACTB--HEYL | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | ACTB^ENSG00000075624.17 | chr7:5528004:- | HEYL^ENSG00000163909.8 | chr1:39624057:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:39694:9169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1274:49014:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2453:32462:7600,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1156:42364:4265 | . | NO_LDAS | 0.0135 | GT | 1.7232 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:5528004-chr1:39624057 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| AC092032.2--RBAK | 4 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC092032.2^ENSG00000288620.1 | chr7:4989177:+ | RBAK^ENSG00000146587.18 | chr7:5048033:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1269:10409:19510,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:2618:23111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:30804:18515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:1534:7950 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[56644]""]" | chr7:4989177-chr7:5048033 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| AC092032.2--PMS2CL | 4 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC092032.2^ENSG00000288620.1 | chr7:4989177:+ | PMS2CL^ENSG00000187953.10 | chr7:6731897:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1269:10409:19510,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:2618:23111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:30804:18515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:1534:7950 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:1.72Mb]""]" | chr7:4989177-chr7:6731897 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| WDR72--AC011029.1 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | WDR72^ENSG00000166415.15 | chr15:53684542:- | AC011029.1^ENSG00000287352.1 | chr8:76306467:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:51724:17254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:34938:18389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1140:50098:29235 | . | YES_LDAS | 0.0101 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr8]""]" | chr15:53684542-chr8:76306467 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| UXT--PDZK1IP1 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | UXT^ENSG00000126756.12 | chrX:47657205:- | PDZK1IP1^ENSG00000162366.8 | chr1:47183619:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1442:12294:11005,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:21023:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1276:51328:25507 | . | NO_LDAS | 0.0101 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chrX--chr1]""]" | chrX:47657205-chr1:47183619 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | |||||||
| UCHL3--LMO7 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | UCHL3^ENSG00000118939.18 | chr13:75569507:+ | LMO7^ENSG00000136153.20 | chr13:75713182:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2360:10392:18726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2440:39832:2906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1158:50478:27904 | . | YES_LDAS | 0.0101 | GT | 1.8323 | AG | 1.6895 | "[""Greger_Normal"",""INTRACHROMOSOMAL[chr13:0.01Mb]"",""NEIGHBORS[14414]""]" | chr13:75569507-chr13:75713182 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| TYW1B--CALN1 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | TYW1B^ENSG00000277149.5 | chr7:72616672:- | CALN1^ENSG00000183166.11 | chr7:72278810:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1478:26006:27497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2448:42744:1420,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:14672:28632 | . | YES_LDAS | 0.0101 | GT | 1.6729 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr7:0.11Mb]""]" | chr7:72616672-chr7:72278810 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| TVP23C--CDRT4 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | TVP23C^ENSG00000175106.17 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | chr17:15438200:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1431:31613:22943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2171:30553:7292,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1295:47566:17282 | . | YES_LDAS | 0.0101 | GT | 1.9329 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr17:0.03Mb]"",""NEIGHBORS[26536]""]" | chr17:15503098-chr17:15438200 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| TRHDE--RBBP7 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | TRHDE^ENSG00000072657.9 | chr12:72272638:+ | RBBP7^ENSG00000102054.18 | chrX:16844626:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:46498:1560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:24243:24555,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1367:21807:4083 | . | NO_LDAS | 0.0101 | GT | 1.1589 | AG | 0.6998 | "[""INTERCHROMOSOMAL[chr12--chrX]""]" | chr12:72272638-chrX:16844626 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | |||||||
| RGS6--AC005993.1 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | RGS6^ENSG00000182732.18 | chr14:71964875:+ | AC005993.1^ENSG00000266869.2 | chr14:71908165:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1320:42850:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2302:37996:24863,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1323:11865:3032 | . | YES_LDAS | 0.0101 | GT | 1.9086 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3833]""]" | chr14:71964875-chr14:71908165 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| RAD51B--CEP170P1 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | RAD51B^ENSG00000182185.18 | chr14:67887204:+ | CEP170P1^ENSG00000154608.14 | chr4:118493552:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1496:29194:19146,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1325:17196:10725,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1215:30375:18894 | . | YES_LDAS | 0.0101 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr4]""]" | chr14:67887204-chr4:118493552 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| POU5F1--TYW1 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | POU5F1^ENSG00000204531.20 | chr6:31166534:- | TYW1^ENSG00000198874.13 | chr7:67067285:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2328:12326:4447,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1462:8896:18011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2325:46862:26825 | . | YES_LDAS | 0.0101 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:31166534-chr7:67067285 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| PINX1--RP1L1 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | PINX1^ENSG00000254093.9 | chr8:10820193:- | RP1L1^ENSG00000183638.6 | chr8:10623220:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2163:2424:11061,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2364:11242:15433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2391:15295:27497 | . | YES_LDAS | 0.0101 | GT | 1.8062 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]" | chr8:10820193-chr8:10623220 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| PIH1D1--WASF3 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | PIH1D1^ENSG00000104872.11 | chr19:49447338:- | WASF3^ENSG00000132970.14 | chr13:26687521:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:11913:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1161:16962:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1249:51401:6773 | . | NO_LDAS | 0.0101 | GT | 1.7968 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr19--chr13]""]" | chr19:49447338-chr13:26687521 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| MUC20--SMBD1P | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | MUC20^ENSG00000176945.17 | chr3:195729739:+ | SMBD1P^ENSG00000283426.1 | chr3:195708747:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:4317:23980,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:44087:22271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2270:21629:13247 | . | YES_LDAS | 0.0101 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9241]""]" | chr3:195729739-chr3:195708747 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| MUC20--AC026412.4 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | MUC20^ENSG00000176945.17 | chr3:195729739:+ | AC026412.4^ENSG00000288549.1 | chr5:1641022:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1153:44144:5330,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:43319:11243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:31912:29319 | . | YES_LDAS | 0.0101 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr3--chr5]""]" | chr3:195729739-chr5:1641022 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| LRRC37A--NSF | 3 | 0 | 0.38 | 0.0 | ONLY_REF_SPLICE | LRRC37A^ENSG00000176681.14 | chr17:46306309:+ | NSF^ENSG00000073969.18 | chr17:46674414:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1428:14632:23910,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2475:17892:19384,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1436:12415:17577 | . | YES_LDAS | 0.0013 | GT | 1.6402 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr17:0.25Mb]""]" | chr17:46306309-chr17:46674414 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| LINC01565--C1QBP | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | LINC01565^ENSG00000198685.4 | chr3:128575266:- | C1QBP^ENSG00000108561.8 | chr17:5434966:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:12690:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2427:46514:21122,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2475:4171:7894 | . | YES_LDAS | 0.0101 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:128575266-chr17:5434966 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| LINC01145--SRGAP2B | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | LINC01145^ENSG00000272419.6 | chr1:145215639:- | SRGAP2B^ENSG00000196369.11 | chr1:144995200:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:26071:14522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1246:1534:13639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1317:16055:29011 | . | YES_LDAS | 0.0101 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:0.07Mb]"",""NEIGHBORS[68571]""]" | chr1:145215639-chr1:144995200 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| KRTAP5-AS1--AP000867.5 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | KRTAP5-AS1^ENSG00000233930.4 | chr11:1598289:+ | AP000867.5^ENSG00000286948.1 | chr11:71563684:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1207:34525:21934,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2132:35407:15699,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2490:35560:8286 | . | YES_LDAS | 0.0101 | GT | 1.6895 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr11:69.96Mb]""]" | chr11:1598289-chr11:71563684 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| HRH1--ATG7 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | HRH1^ENSG00000196639.7 | chr3:11154554:+ | ATG7^ENSG00000197548.12 | chr3:11298686:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:20181:25900,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:13410:25914,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1308:31305:12574 | . | YES_LDAS | 0.0101 | GT | 1.2867 | AG | 1.7968 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[8752]""]" | chr3:11154554-chr3:11298686 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| HPS5--FXYD2 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | HPS5^ENSG00000110756.18 | chr11:18291442:- | FXYD2^ENSG00000137731.14 | chr11:117819204:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:25763:23546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1288:38651:12910,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2115:26071:9814 | . | NO_LDAS | 0.0101 | GT | 1.5656 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr11:99.48Mb]""]" | chr11:18291442-chr11:117819204 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 3 | ||||||
| FOXO1--LINC00598 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | FOXO1^ENSG00000150907.10 | chr13:40665583:- | LINC00598^ENSG00000215483.11 | chr13:40466677:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2368:19874:21752,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2439:24679:22257,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2455:10490:19847 | . | YES_LDAS | 0.0101 | GT | 1.7232 | AG | 1.8892 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]" | chr13:40665583-chr13:40466677 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| FOXO1--LINC00598 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | FOXO1^ENSG00000150907.10 | chr13:40665583:- | LINC00598^ENSG00000215483.11 | chr13:40350302:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2183:27212:25353,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1212:52202:25003,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1330:16994:14410 | . | YES_LDAS | 0.0101 | GT | 1.7232 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]" | chr13:40665583-chr13:40350302 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| FBXL5--AC099550.1 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | FBXL5^ENSG00000118564.15 | chr4:15612266:- | AC099550.1^ENSG00000251379.1 | chr4:15362523:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1427:17601:14676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1333:37761:7754,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1391:12156:10010 | . | YES_LDAS | 0.0101 | GT | 1.9219 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr4:0.18Mb]""]" | chr4:15612266-chr4:15362523 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| CPSF6--AGT | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | CPSF6^ENSG00000111605.18 | chr12:69262566:+ | AGT^ENSG00000135744.9 | chr1:230693249:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:36078:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:18555:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2326:6259:27904 | . | NO_LDAS | 0.0101 | GT | 1.8062 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:69262566-chr1:230693249 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | |||||||
| BX005040.4--CNTNAP3C | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | BX005040.4^ENSG00000283541.1 | chr9:61096836:- | CNTNAP3C^ENSG00000283378.1 | chr9:61440605:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1466:17868:2499,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:41256:24653,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2122:43497:24218 | . | YES_LDAS | 0.0101 | GT | 1.8062 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61096836-chr9:61440605 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| BAG2--PRIM2 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | BAG2^ENSG00000112208.11 | chr6:57172810:+ | PRIM2^ENSG00000146143.19 | chr6:57318437:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1415:43230:20954,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1341:13709:11635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1466:11913:24639 | . | YES_LDAS | 0.0101 | GT | 1.9086 | AG | 1.8323 | "[""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr6:0.12Mb]""]" | chr6:57172810-chr6:57318437 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| AL139094.1--TMC4 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | AL139094.1^ENSG00000220685.3 | chr6:5066922:- | TMC4^ENSG00000167608.12 | chr19:54171991:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:28935:4881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1128:2683:16554,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:1647:17506 | . | NO_LDAS | 0.0101 | GT | 1.4566 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:5066922-chr19:54171991 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 3 | ||||||
| AL022157.1--FAAH2 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | AL022157.1^ENSG00000226310.1 | chrX:57127058:+ | FAAH2^ENSG00000165591.7 | chrX:57292498:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:12965:12700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2408:20796:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2439:12682:25017 | . | YES_LDAS | 0.0101 | GT | 1.9656 | AG | 1.5656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chrX:0.16Mb]""]" | chrX:57127058-chrX:57292498 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| AC104383.1--GALNT18 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | AC104383.1^ENSG00000286959.1 | chr11:11811462:- | GALNT18^ENSG00000110328.6 | chr11:11448936:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:44807:2107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1314:4891:22032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2255:50317:16610 | . | YES_LDAS | 0.0101 | GT | 1.8295 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr11:0.16Mb]""]" | chr11:11811462-chr11:11448936 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| AC019186.1--ACVR1C | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | AC019186.1^ENSG00000234584.1 | chr2:157735944:- | ACVR1C^ENSG00000123612.16 | chr2:157587417:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1218:5320:11930,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1155:31993:1182,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1322:36111:5428 | . | YES_LDAS | 0.0101 | GT | 1.9899 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr2:0.10Mb]"",""NEIGHBORS[96844]""]" | chr2:157735944-chr2:157587417 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| AC008740.1--CRYM-AS1 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | AC008740.1^ENSG00000257403.2 | chr16:21352138:+ | CRYM-AS1^ENSG00000189149.12 | chr16:21315907:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:25052:9281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:10457:1490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:49136:19328 | . | YES_LDAS | 0.0101 | GT | 1.7232 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]" | chr16:21352138-chr16:21315907 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| GNG10--UGCG | 3 | 1 | 3.0 | 1.0 | ONLY_REF_SPLICE | GNG10^ENSG00000242616.4 | chr9:111666946:+ | UGCG^ENSG00000148154.10 | chr9:111914605:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1257:23288:8132,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:43861:6128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2353:23620:23812 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:8969:18669 | YES_LDAS | 0.0135 | GT | 1.9329 | AG | 1.7819 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.23Mb]""]" | chr9:111666946-chr9:111914605 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| CMC2--ARLNC1 | 3 | 1 | 3.0 | 0.6 | ONLY_REF_SPLICE | CMC2^ENSG00000103121.9 | chr16:80997314:- | ARLNC1^ENSG00000260896.6 | chr16:80840222:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:30294:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:19178:19875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:42202:16904 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1233:10700:20715 | YES_LDAS | 0.0121 | GT | 1.7232 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr16:0.07Mb]"",""NEIGHBORS[73766]""]" | chr16:80997314-chr16:80840222 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| AC242842.1--SEC22B2P | 3 | 1 | 0.75 | 0.25 | ONLY_REF_SPLICE | AC242842.1^ENSG00000275557.1 | chr1:149608516:+ | SEC22B2P^ENSG00000274423.1 | chr1:149351251:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2242:51425:28983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2243:19122:5596,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:6218:14186 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:13750:6661 | YES_LDAS | 0.0033 | GT | 1.7819 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:0.25Mb]""]" | chr1:149608516-chr1:149351251 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 4 | ||||||
| AC005993.1--RGS6 | 3 | 1 | 3.0 | 0.23 | ONLY_REF_SPLICE | AC005993.1^ENSG00000266869.2 | chr14:71848736:+ | RGS6^ENSG00000182732.18 | chr14:72352095:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:25521:22565,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2246:41539:9562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:50365:8146 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:30310:26516 | YES_LDAS | 0.0109 | GT | 1.9656 | AG | 1.8323 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]" | chr14:71848736-chr14:72352095 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| WDR27--AL135910.1 | 3 | 2 | 3.0 | 1.0 | INCL_NON_REF_SPLICE | WDR27^ENSG00000184465.16 | chr6:169582836:- | AL135910.1^ENSG00000272848.2 | chr6:169433402:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1274:11113:25073,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2114:16420:3859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1468:18305:4041 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:20473:1378,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:48610:7011 | YES_LDAS | 0.0135 | GT | 1.6729 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS[4737]""]" | chr6:169582836-chr6:169433402 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 5 | |||
| AC005993.1--RGS6 | 3 | 2 | 3.0 | 0.59 | ONLY_REF_SPLICE | AC005993.1^ENSG00000266869.2 | chr14:71908434:+ | RGS6^ENSG00000182732.18 | chr14:72352095:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1416:17819:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2196:22527:8945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2280:37081:11453 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:30310:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:13798:18740 | YES_LDAS | 0.0121 | GT | 1.8892 | AG | 1.8323 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]" | chr14:71908434-chr14:72352095 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| AC005993.1--RGS6 | 3 | 3 | 3.0 | 1.79 | ONLY_REF_SPLICE | AC005993.1^ENSG00000266869.2 | chr14:71916030:+ | RGS6^ENSG00000182732.18 | chr14:72352095:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1289:13321:9337,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2336:15182:3004,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1168:51732:5862 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:30310:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:4163:5162,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:13798:18740 | YES_LDAS | 0.0162 | GT | 1.6402 | AG | 1.8323 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]" | chr14:71916030-chr14:72352095 | False | 0 | Read | count | too | low: | 6 | < | 8 | FAIL | 6 | |||
| YWHAEP7--MRPL45 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | YWHAEP7^ENSG00000276715.4 | chr17:37874204:- | MRPL45^ENSG00000278845.5 | chr17:38298449:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:38934:20071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2345:45616:16231 | . | YES_LDAS | 0.0068 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr17:0.41Mb]""]" | chr17:37874204-chr17:38298449 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| WDR70--NACAD | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WDR70^ENSG00000082068.9 | chr5:37396574:+ | NACAD^ENSG00000136274.9 | chr7:45085185:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1296:25950:27007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:32017:12630 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr5--chr7]""]" | chr5:37396574-chr7:45085185 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| VPS16--LHX9 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | VPS16^ENSG00000215305.10 | chr20:2861678:+ | LHX9^ENSG00000143355.16 | chr1:197916022:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:43618:4391,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:41741:3802 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr20--chr1]""]" | chr20:2861678-chr1:197916022 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| VAMP1--AC096588.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | VAMP1^ENSG00000139190.17 | chr12:6464890:- | AC096588.1^ENSG00000249392.1 | chr4:59551254:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:7642:18025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:49233:19076 | . | NO_LDAS | 0.0068 | GT | 1.5301 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:6464890-chr4:59551254 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| UTP25--TSPAN1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | UTP25^ENSG00000117597.18 | chr1:209854579:+ | TSPAN1^ENSG00000117472.10 | chr1:46184594:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:37890:9351,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1258:31669:22397 | . | NO_LDAS | 0.0068 | GC | 1.8062 | AG | 1.2729 | "[""INTRACHROMOSOMAL[chr1:163.64Mb]""]" | chr1:209854579-chr1:46184594 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| UQCRB--TEX13B | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | UQCRB^ENSG00000156467.10 | chr8:96231793:- | TEX13B^ENSG00000170925.3 | chrX:107982153:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1152:29048:16568,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2391:23798:28660 | . | NO_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chrX]""]" | chr8:96231793-chrX:107982153 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| UBXN7--RNF168 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | UBXN7^ENSG00000163960.12 | chr3:196391813:- | RNF168^ENSG00000163961.4 | chr3:196483891:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:40625:27203,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1118:24234:28492 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr3:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[36353]""]" | chr3:196391813-chr3:196483891 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| U62317.3--RMI1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | U62317.3^ENSG00000273272.2 | chr22:50541456:+ | RMI1^ENSG00000178966.17 | chr9:83999709:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1480:25230:14354,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1162:19947:28856 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr22--chr9]""]" | chr22:50541456-chr9:83999709 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| TYW1B--CALN1 | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TYW1B^ENSG00000277149.5 | chr7:72616672:- | CALN1^ENSG00000183166.11 | chr7:72403442:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:24162:24667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:8168:8314 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr7:0.11Mb]""]" | chr7:72616672-chr7:72403442 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| TSC1--RABGAP1 | 2 | 0 | 0.4 | 0.0 | ONLY_REF_SPLICE | TSC1^ENSG00000165699.15 | chr9:132944543:- | RABGAP1^ENSG00000011454.18 | chr9:122957011:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1168:50883:2149,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2488:41013:4811 | . | NO_LDAS | 0.0014 | GT | 1.3753 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr9:9.79Mb]""]" | chr9:132944543-chr9:122957011 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| TMEM141--NUDT16L2P | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM141^ENSG00000244187.8 | chr9:136792358:+ | NUDT16L2P^ENSG00000246082.2 | chr3:131361917:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:29428:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:20157:25409 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr3]""]" | chr9:136792358-chr3:131361917 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| TMEM141--AC018445.3 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM141^ENSG00000244187.8 | chr9:136792358:+ | AC018445.3^ENSG00000279637.1 | chr18:79421494:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:29428:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:20157:25409 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr9--chr18]""]" | chr9:136792358-chr18:79421494 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| TMCO2--HKDC1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | TMCO2^ENSG00000188800.6 | chr1:40247448:+ | HKDC1^ENSG00000156510.13 | chr10:69232764:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:45277:11972,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:27818:19875 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:40247448-chr10:69232764 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| TBC1D4--FAM76B | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | TBC1D4^ENSG00000136111.14 | chr13:75302239:- | FAM76B^ENSG00000077458.13 | chr11:95786626:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1381:39120:6493,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2215:1396:15503 | . | NO_LDAS | 0.0068 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr13--chr11]""]" | chr13:75302239-chr11:95786626 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| TANGO2--PLIN4 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | TANGO2^ENSG00000183597.16 | chr22:20066771:+ | PLIN4^ENSG00000167676.4 | chr19:4513223:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1437:2375:13163,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2483:42947:7684 | . | NO_LDAS | 0.0068 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr19]""]" | chr22:20066771-chr19:4513223 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| SYNJ2BP--TRMT11 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | SYNJ2BP^ENSG00000213463.5 | chr14:70372555:- | TRMT11^ENSG00000066651.20 | chr6:125986531:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1185:44581:6563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1185:44597:6563 | . | NO_LDAS | 0.0068 | GT | 1.5058 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr14--chr6]""]" | chr14:70372555-chr6:125986531 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| SYCE1L--AC009139.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SYCE1L^ENSG00000205078.6 | chr16:77212369:+ | AC009139.1^ENSG00000260922.2 | chr16:77289276:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:46474:25479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2254:32753:3620 | . | YES_LDAS | 0.0068 | GT | 1.7232 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr16:0.02Mb]"",""NEIGHBORS[21662]""]" | chr16:77212369-chr16:77289276 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| STX5--NECAB1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | STX5^ENSG00000162236.13 | chr11:62831112:- | NECAB1^ENSG00000123119.12 | chr8:90940762:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1362:22536:8427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2277:26055:21164 | . | NO_LDAS | 0.0068 | GT | 1.2366 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:62831112-chr8:90940762 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| SRSF6--L3MBTL1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SRSF6^ENSG00000124193.16 | chr20:43460598:+ | L3MBTL1^ENSG00000185513.17 | chr20:43513476:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2361:26289:3774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1290:4754:29333 | . | YES_LDAS | 0.0068 | GT | 1.9086 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr20:0.02Mb]"",""NEIGHBORS[23396]""]" | chr20:43460598-chr20:43513476 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| SNX11--CBX1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | SNX11^ENSG00000002919.15 | chr17:48121565:+ | CBX1^ENSG00000108468.15 | chr17:48071579:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:30593:26278,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1170:48941:16498 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_INVERSION:+:-:[1879]""]" | chr17:48121565-chr17:48071579 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| SNORC--AL049872.1 | 2 | 0 | 0.4 | 0.0 | INCL_NON_REF_SPLICE | SNORC^ENSG00000182600.9 | chr2:232870414:+ | AL049872.1^ENSG00000259020.3 | chr14:92026611:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:20554:9029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2145:41070:18698 | . | YES_LDAS | 0.0014 | GT | 1.9086 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr2--chr14]""]" | chr2:232870414-chr14:92026611 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| SMURF2P1--AC005562.2 | 2 | 0 | 0.75 | 0.0 | INCL_NON_REF_SPLICE | SMURF2P1^ENSG00000248121.8 | chr17:30610942:+ | AC005562.2^ENSG00000273609.1 | chr17:30617791:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:17746:13079,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1414:9325:8272 | . | YES_LDAS | 0.0025 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_INVERSION:+:-:[1700]""]" | chr17:30610942-chr17:30617791 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| SMIM13--AL022098.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SMIM13^ENSG00000224531.6 | chr6:11094389:+ | AL022098.1^ENSG00000287920.1 | chr6:11295769:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1146:6008:23490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:5174:19861 | . | YES_LDAS | 0.0068 | GT | 1.6895 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:0.15Mb]""]" | chr6:11094389-chr6:11295769 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| SMIM13--AL022098.1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | SMIM13^ENSG00000224531.6 | chr6:11094389:+ | AL022098.1^ENSG00000287920.1 | chr6:11294979:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:9907:11719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:43481:7852 | . | YES_LDAS | 0.0068 | GT | 1.6895 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:0.15Mb]""]" | chr6:11094389-chr6:11294979 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| SMAGP--POU6F1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SMAGP^ENSG00000170545.17 | chr12:51246751:- | POU6F1^ENSG00000184271.17 | chr12:51206883:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1264:1332:23714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1187:42372:3859 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr12:0.03Mb]"",""NEIGHBORS[26850]""]" | chr12:51246751-chr12:51206883 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| RPL12P31--RPL12P35 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL12P31^ENSG00000241228.1 | chr11:35997632:- | RPL12P35^ENSG00000243007.1 | chr15:72379652:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:1607:21892,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:18070:14480 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:35997632-chr15:72379652 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| RELL1--SET | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RELL1^ENSG00000181826.10 | chr4:37686200:- | SET^ENSG00000119335.17 | chr9:128691170:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1275:23345:15152,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2169:42793:21822 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr4--chr9]""]" | chr4:37686200-chr9:128691170 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| RBM39--PRSS23 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | RBM39^ENSG00000131051.24 | chr20:35729312:- | PRSS23^ENSG00000150687.12 | chr11:86937052:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1312:2125:22088,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2329:15182:23350 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr20--chr11]""]" | chr20:35729312-chr11:86937052 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | ||||||
| RARS2--TLCD2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | RARS2^ENSG00000146282.18 | chr6:87555408:- | TLCD2^ENSG00000185561.10 | chr17:1707163:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1339:42348:7432,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2145:3929:9155 | . | YES_LDAS | 0.0068 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr6--chr17]""]" | chr6:87555408-chr17:1707163 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| PRELID2--AC137770.1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | PRELID2^ENSG00000186314.11 | chr5:145764931:- | AC137770.1^ENSG00000250842.1 | chr5:145381718:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:32664:3214,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2192:32583:3690 | . | YES_LDAS | 0.0068 | GT | 1.5546 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr5:0.09Mb]"",""NEIGHBORS[90129]""]" | chr5:145764931-chr5:145381718 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| PHBP11--KLK5 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | PHBP11^ENSG00000227621.1 | chr1:223856813:- | KLK5^ENSG00000167754.13 | chr19:50952913:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1192:47566:21878,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1224:27446:3676 | . | NO_LDAS | 0.0068 | GT | 1.8892 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:223856813-chr19:50952913 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| PAXX--ACTB | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | PAXX^ENSG00000148362.11 | chr9:136992566:+ | ACTB^ENSG00000075624.17 | chr7:5527252:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2246:43618:1364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2276:17908:27820 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr9--chr7]""]" | chr9:136992566-chr7:5527252 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| OPN3--CD47 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | OPN3^ENSG00000054277.14 | chr1:241614043:- | CD47^ENSG00000196776.17 | chr3:108051970:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1478:48149:21150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1235:10773:2037 | . | NO_LDAS | 0.0068 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:241614043-chr3:108051970 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| NPM1P31--NPM1P4 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | NPM1P31^ENSG00000214807.2 | chr10:124867902:+ | NPM1P4^ENSG00000226703.1 | chr13:27696868:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2146:49500:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1106:21816:10542 | . | NO_LDAS | 0.0068 | GT | 1.2867 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr10--chr13]""]" | chr10:124867902-chr13:27696868 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| NOS1AP--ZNF793-AS1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | NOS1AP^ENSG00000198929.13 | chr1:162070282:+ | ZNF793-AS1^ENSG00000266916.7 | chr19:37497358:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:14624:21682,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:7068:22018 | . | NO_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:162070282-chr19:37497358 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| NEDD8--SCN8A | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | NEDD8^ENSG00000129559.13 | chr14:24218133:- | SCN8A^ENSG00000196876.18 | chr12:51689982:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2434:33101:3410,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:35738:5176 | . | NO_LDAS | 0.0068 | GT | 1.9086 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr14--chr12]""]" | chr14:24218133-chr12:51689982 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| NDUFS5--NDUFS5P2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | NDUFS5^ENSG00000168653.11 | chr1:39034556:+ | NDUFS5P2^ENSG00000234226.5 | chr1:96584461:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:27810:25437,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2180:40212:19678 | . | NO_LDAS | 0.0068 | GT | 1.9899 | AG | 1.371 | "[""INTRACHROMOSOMAL[chr1:57.55Mb]""]" | chr1:39034556-chr1:96584461 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| MRPS6--AP000317.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | MRPS6^ENSG00000243927.6 | chr21:34073745:+ | AP000317.1^ENSG00000214955.5 | chr21:34293681:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2294:28029:11243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1211:9592:9267 | . | YES_LDAS | 0.0068 | GT | 1.8256 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr21:0.06Mb]"",""NEIGHBORS[62021]""]" | chr21:34073745-chr21:34293681 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| MRPS6--AP000317.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | MRPS6^ENSG00000243927.6 | chr21:34073745:+ | AP000317.1^ENSG00000214955.5 | chr21:34262820:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1150:32276:10304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1204:28854:13681 | . | YES_LDAS | 0.0068 | GT | 1.8256 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr21:0.06Mb]"",""NEIGHBORS[62021]""]" | chr21:34073745-chr21:34262820 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| MAP3K14-AS1--AC106799.2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | MAP3K14-AS1^ENSG00000267278.6 | chr17:45255218:+ | AC106799.2^ENSG00000248973.3 | chr5:4657565:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:46361:1911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1433:41329:5638 | . | NO_LDAS | 0.0068 | GT | 1.9656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr5]""]" | chr17:45255218-chr5:4657565 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| LSP1P4--AC245060.4 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | LSP1P4^ENSG00000143429.10 | chr2:91659909:- | AC245060.4^ENSG00000272779.1 | chr22:22303224:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2282:47016:6325,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2467:41507:15895 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr2--chr22]""]" | chr2:91659909-chr22:22303224 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| LINC02108--COA1 | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02108^ENSG00000250127.1 | chr5:58547135:- | COA1^ENSG00000106603.19 | chr7:43650712:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2403:36750:5806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1270:20918:6605 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr5--chr7]""]" | chr5:58547135-chr7:43650712 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| LINC02093--MOSPD1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | LINC02093^ENSG00000234634.2 | chr17:13301119:- | MOSPD1^ENSG00000101928.13 | chrX:134891640:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:31871:20029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2475:42243:27231 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chrX]""]" | chr17:13301119-chrX:134891640 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| LINC00592--ANKRD13C | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | LINC00592^ENSG00000258279.4 | chr12:52222943:+ | ANKRD13C^ENSG00000118454.13 | chr1:70324957:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2329:14826:9870,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:15457:5834 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:52222943-chr1:70324957 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| LINC00511--SLC39A11 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | LINC00511^ENSG00000227036.8 | chr17:72603103:- | SLC39A11^ENSG00000133195.11 | chr17:72649268:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2401:24040:16021,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2165:21816:27301 | . | YES_LDAS | 0.0068 | GT | 1.6729 | AG | 1.9086 | "[""DEEPEST2019"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5477]""]" | chr17:72603103-chr17:72649268 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| KRT8P10--KRT6B | 2 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | KRT8P10^ENSG00000231203.1 | chr2:183071891:- | KRT6B^ENSG00000185479.6 | chr12:52451583:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:29218:23560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1171:7076:24527 | . | YES_LDAS | 0.0017 | GT | 1.9219 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr2--chr12]""]" | chr2:183071891-chr12:52451583 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| KIF20B--DMGDH | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | KIF20B^ENSG00000138182.15 | chr10:89762835:+ | DMGDH^ENSG00000132837.15 | chr5:79021360:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1266:43238:6423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2469:31054:24723 | . | NO_LDAS | 0.0068 | GT | 1.4295 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr10--chr5]""]" | chr10:89762835-chr5:79021360 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| KCNMB2-AS1--GLDN | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KCNMB2-AS1^ENSG00000237978.6 | chr3:178860294:- | GLDN^ENSG00000186417.14 | chr15:51377449:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:19769:22971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1111:29776:9057 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr15]""]" | chr3:178860294-chr15:51377449 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| IARS1--AP002495.1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | IARS1^ENSG00000196305.18 | chr9:92270992:- | AP002495.1^ENSG00000254469.8 | chr11:71865747:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1424:45333:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2218:20570:2023 | . | NO_LDAS | 0.0068 | GC | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:92270992-chr11:71865747 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| HTR7--LINC02653 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | HTR7^ENSG00000148680.16 | chr10:90748839:- | LINC02653^ENSG00000236373.2 | chr10:90543450:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:38206:24302,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:44476:19945 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr10:0.11Mb]""]" | chr10:90748839-chr10:90543450 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| HNRNPKP3--CACNB2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | HNRNPKP3^ENSG00000251557.2 | chr11:43261684:- | CACNB2^ENSG00000165995.22 | chr10:18541050:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1253:36717:7404,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:47242:25437 | . | NO_LDAS | 0.0068 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr10]""]" | chr11:43261684-chr10:18541050 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | ||||||
| HMGN2--CD4 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | HMGN2^ENSG00000198830.11 | chr1:26474135:+ | CD4^ENSG00000010610.10 | chr12:6815882:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:36693:23504,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2165:50883:24260 | . | NO_LDAS | 0.0068 | GT | 1.8256 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:26474135-chr12:6815882 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | ||||||
| HELLPAR--PARPBP | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | HELLPAR^ENSG00000281344.1 | chr12:102205157:+ | PARPBP^ENSG00000185480.12 | chr12:102153869:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1211:12795:22943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1281:15279:26909 | . | YES_LDAS | 0.0068 | GT | 1.5301 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[65]""]" | chr12:102205157-chr12:102153869 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| GPR135--L3HYPDH | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | GPR135^ENSG00000181619.11 | chr14:59456438:- | L3HYPDH^ENSG00000126790.12 | chr14:59479351:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:4018:3929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:14348:6941 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS_OVERLAP:-:-:[4979]""]" | chr14:59456438-chr14:59479351 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| GOLGA2P8--ZNF774 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | GOLGA2P8^ENSG00000214433.4 | chr15:90295226:+ | ZNF774^ENSG00000196391.11 | chr15:90354642:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1358:32033:4895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1414:40916:12098 | . | YES_LDAS | 0.0068 | GT | 1.5329 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr15:0.06Mb]"",""NEIGHBORS[56601]""]" | chr15:90295226-chr15:90354642 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| GCOM1--MTRNR2L12 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GCOM1^ENSG00000137878.17 | chr15:57637774:+ | MTRNR2L12^ENSG00000269028.3 | chr3:96617452:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:45455:21724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1331:24194:2808 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr15--chr3]""]" | chr15:57637774-chr3:96617452 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| FUS--NTM | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FUS^ENSG00000089280.19 | chr16:31184352:+ | NTM^ENSG00000182667.14 | chr11:131911603:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1414:32413:25283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:47946:24835 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr11]""]" | chr16:31184352-chr11:131911603 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| FOXO1--LINC00598 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | FOXO1^ENSG00000150907.10 | chr13:40665583:- | LINC00598^ENSG00000215483.11 | chr13:40474095:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2128:50446:11846,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2231:2343:19020 | . | YES_LDAS | 0.0068 | GT | 1.7232 | AG | 1.8295 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]" | chr13:40665583-chr13:40474095 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| FAM155B--EDA | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | FAM155B^ENSG00000130054.5 | chrX:69506143:+ | EDA^ENSG00000158813.18 | chrX:69957027:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1168:3621:28716,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1331:42502:4783 | . | YES_LDAS | 0.0068 | GT | 1.8323 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:0.08Mb]"",""NEIGHBORS[83559]""]" | chrX:69506143-chrX:69957027 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| DEF8--TCF3P1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | DEF8^ENSG00000140995.17 | chr16:89957570:+ | TCF3P1^ENSG00000236567.2 | chr9:5112450:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:12391:12630,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:44621:7025 | . | NO_LDAS | 0.0068 | GT | 1.6895 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr16--chr9]""]" | chr16:89957570-chr9:5112450 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| DBNDD2--SYS1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | DBNDD2^ENSG00000244274.8 | chr20:45410255:+ | SYS1^ENSG00000204070.10 | chr20:45366875:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1413:39274:24527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:28223:10767 | . | YES_LDAS | 0.0068 | GT | 1.8256 | AG | 1.585 | "[""INTRACHROMOSOMAL[chr20:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[29259]""]" | chr20:45410255-chr20:45366875 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| CYP20A1--SPECC1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | CYP20A1^ENSG00000119004.16 | chr2:203246921:+ | SPECC1^ENSG00000128487.18 | chr17:20315855:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2360:8863:2934,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1276:6477:11635 | . | NO_LDAS | 0.0068 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:203246921-chr17:20315855 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | ||||||
| CR382285.1--RPA1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CR382285.1^ENSG00000270533.2 | chr21:9992166:- | RPA1^ENSG00000132383.12 | chr17:1853101:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1377:39080:15671,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:39792:27385 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr21--chr17]""]" | chr21:9992166-chr17:1853101 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| CNTNAP3C--BX005040.4 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CNTNAP3C^ENSG00000283378.1 | chr9:61453030:+ | BX005040.4^ENSG00000283541.1 | chr9:61104578:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:17673:3844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:47356:24737 | . | YES_LDAS | 0.0068 | GT | 1.8295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61453030-chr9:61104578 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| CLVS1--PLS3 | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CLVS1^ENSG00000177182.11 | chr8:61465804:+ | PLS3^ENSG00000102024.18 | chrX:115610243:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:45503:3032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2307:45980:15433 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chrX]""]" | chr8:61465804-chrX:115610243 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| CLN3--HMGB1P5 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CLN3^ENSG00000188603.22 | chr16:28475958:- | HMGB1P5^ENSG00000132967.9 | chr3:22382350:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2105:20901:21150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2102:42081:17338 | . | NO_LDAS | 0.0034 | GC | 1.6402 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr16--chr3]""]" | chr16:28475958-chr3:22382350 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| CLHC1--XRN1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CLHC1^ENSG00000162994.16 | chr2:55222235:- | XRN1^ENSG00000114127.11 | chr3:142335509:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2193:4115:3060,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2193:4123:3046 | . | NO_LDAS | 0.0068 | GT | 1.5058 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:55222235-chr3:142335509 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| CLDN15--FIS1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CLDN15^ENSG00000106404.14 | chr7:101237365:- | FIS1^ENSG00000214253.9 | chr7:101240906:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:14211:5610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2410:44346:8034 | . | YES_LDAS | 0.0068 | GT | 1.5656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[638]""]" | chr7:101237365-chr7:101240906 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| CDKN1C--AC007967.4 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | CDKN1C^ENSG00000129757.14 | chr11:2885056:- | AC007967.4^ENSG00000273731.1 | chrY:8931269:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:36337:5680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1308:31766:15979 | . | NO_LDAS | 0.0068 | GT | 1.2729 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr11--chrY]""]" | chr11:2885056-chrY:8931269 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| C12orf65--THEM4 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | C12orf65^ENSG00000130921.9 | chr12:123248480:+ | THEM4^ENSG00000159445.13 | chr1:151895194:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1472:30116:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2485:45681:7712 | . | NO_LDAS | 0.0068 | GT | 1.8295 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:123248480-chr1:151895194 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| BX005040.4--CNTNAP3C | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | BX005040.4^ENSG00000283541.1 | chr9:61113783:- | CNTNAP3C^ENSG00000283378.1 | chr9:61425702:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:46522:24330,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2305:37308:15265 | . | YES_LDAS | 0.0068 | GT | 1.8256 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61113783-chr9:61425702 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| BCKDHB--AL359715.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | BCKDHB^ENSG00000083123.15 | chr6:80273221:+ | AL359715.1^ENSG00000233967.7 | chr6:80453157:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2121:47542:20939,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1201:20036:18585 | . | YES_LDAS | 0.0068 | GT | 1.9899 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr6:0.10Mb]"",""NEIGHBORS[95025]""]" | chr6:80273221-chr6:80453157 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| BCAP29--SLC26A4 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | BCAP29^ENSG00000075790.12 | chr7:107613432:+ | SLC26A4^ENSG00000091137.14 | chr7:107661639:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1356:48084:15825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2205:6218:13849 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr7:0.03Mb]"",""NEIGHBORS[31658]""]" | chr7:107613432-chr7:107661639 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| BBOX1-AS1--GLDN | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BBOX1-AS1^ENSG00000254560.6 | chr11:27220047:- | GLDN^ENSG00000186417.14 | chr15:51377449:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:19769:22971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1111:29776:9057 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:27220047-chr15:51377449 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| B4GALT4--IGSF11 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | B4GALT4^ENSG00000121578.13 | chr3:119216240:- | IGSF11^ENSG00000144847.13 | chr3:118930275:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2355:22083:16470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2489:14518:10374 | . | YES_LDAS | 0.0068 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:0.07Mb]"",""NEIGHBORS[65664]""]" | chr3:119216240-chr3:118930275 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| ATXN2--CSTF1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | ATXN2^ENSG00000204842.18 | chr12:111597916:- | CSTF1^ENSG00000101138.12 | chr20:56397207:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:44476:28352,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:35682:4909 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:111597916-chr20:56397207 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| ARMC4--AL355493.1 | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARMC4^ENSG00000169126.16 | chr10:27961568:- | AL355493.1^ENSG00000215409.4 | chr10:27331566:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1146:47760:14732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2288:20699:29207 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.7968 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr10:0.43Mb]""]" | chr10:27961568-chr10:27331566 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| ARLNC1--CDYL2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | ARLNC1^ENSG00000260896.6 | chr16:80840119:- | CDYL2^ENSG00000166446.15 | chr16:80685129:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:29040:1392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:22681:16385 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.585 | "[""INTRACHROMOSOMAL[chr16:0.02Mb]"",""NEIGHBORS[21476]""]" | chr16:80840119-chr16:80685129 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| APBB3--TKFC | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | APBB3^ENSG00000113108.20 | chr5:140561018:- | TKFC^ENSG00000149476.16 | chr11:61342461:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1311:20958:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:32956:20113 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr5--chr11]""]" | chr5:140561018-chr11:61342461 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AL670729.1--BEND6 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AL670729.1^ENSG00000270094.1 | chr1:228395806:+ | BEND6^ENSG00000151917.18 | chr6:56992380:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:14688:8034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2324:5409:24639 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:228395806-chr6:56992380 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AL445250.1--AC110079.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AL445250.1^ENSG00000225096.3 | chr6:57961742:+ | AC110079.1^ENSG00000260404.3 | chr4:118595912:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2319:48852:18838,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1173:32049:12154 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr4]""]" | chr6:57961742-chr4:118595912 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AL358790.1--PLS3 | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL358790.1^ENSG00000282772.1 | chr10:102851508:- | PLS3^ENSG00000102024.18 | chrX:115610243:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:45503:3032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2307:45980:15433 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chrX]""]" | chr10:102851508-chrX:115610243 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| AKR1C1--AKR1E2 | 2 | 0 | 0.67 | 0.0 | ONLY_REF_SPLICE | AKR1C1^ENSG00000187134.14 | chr10:4972749:+ | AKR1E2^ENSG00000165568.18 | chr10:4830675:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:25602:28898,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1202:14939:29515 | . | NO_LDAS | 0.0023 | GT | 1.7819 | AG | 1.9899 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr10:0.12Mb]""]" | chr10:4972749-chr10:4830675 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 2 | ||||||
| AGBL5--ATRAID | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AGBL5^ENSG00000084693.16 | chr2:27051950:+ | ATRAID^ENSG00000138085.17 | chr2:27215321:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:14583:11832,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:14599:11832 | . | NO_LDAS | 0.0068 | GT | 1.4256 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr2:0.14Mb]""]" | chr2:27051950-chr2:27215321 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| AF064860.2--IGSF5 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AF064860.2^ENSG00000231713.2 | chr21:39727992:+ | IGSF5^ENSG00000183067.5 | chr21:39765535:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:42550:7362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1288:23490:24597 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr21:0.01Mb]"",""NEIGHBORS[14727]""]" | chr21:39727992-chr21:39765535 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| AC127502.3--AC135983.2 | 2 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC127502.3^ENSG00000283345.1 | chr15:30513698:+ | AC135983.2^ENSG00000223509.8 | chr15:32533368:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:8394:23560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2380:45010:6857 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:2.01Mb]""]" | chr15:30513698-chr15:32533368 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| AC099654.11--AL627309.5 | 2 | 0 | 0.4 | 0.0 | ONLY_REF_SPLICE | AC099654.11^ENSG00000286436.1 | chr7:57148471:+ | AL627309.5^ENSG00000241860.7 | chr1:173862:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1206:46895:15811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1142:31386:26082 | . | NO_LDAS | 0.0014 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:57148471-chr1:173862 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AC097500.1--FSIP2-AS1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AC097500.1^ENSG00000287129.1 | chr2:185950644:- | FSIP2-AS1^ENSG00000231646.6 | chr2:185800148:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:34209:26628,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:47534:11958 | . | YES_LDAS | 0.0068 | GT | 1.9899 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr2:0.15Mb]""]" | chr2:185950644-chr2:185800148 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| AC097493.3--AC107918.4 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AC097493.3^ENSG00000284648.1 | chr4:9532647:+ | AC107918.4^ENSG00000284610.1 | chr8:12015072:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:41086:3144,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2322:12399:12644 | . | YES_LDAS | 0.0068 | GT | 1.4566 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr4--chr8]""]" | chr4:9532647-chr8:12015072 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| AC092032.3--PMS2CL | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AC092032.3^ENSG00000288633.1 | chr7:4996798:+ | PMS2CL^ENSG00000187953.10 | chr7:6731897:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2274:45293:2892,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1289:48577:8973 | . | YES_LDAS | 0.0068 | GT | 1.5546 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:1.71Mb]""]" | chr7:4996798-chr7:6731897 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AC087280.2--DCHS1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC087280.2^ENSG00000283415.2 | chr11:6924498:- | DCHS1^ENSG00000166341.9 | chr11:6641733:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1483:1752:10570,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2431:29808:19706 | . | NO_LDAS | 0.0068 | GT | 1.6895 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr11:0.17Mb]""]" | chr11:6924498-chr11:6641733 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| AC079781.4--ENPP7P3 | 2 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | AC079781.4^ENSG00000284627.1 | chr7:97928082:- | ENPP7P3^ENSG00000248618.1 | chr3:130167943:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:23652:25101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2337:13596:27273 | . | YES_LDAS | 0.0008 | GT | 1.4566 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr3]""]" | chr7:97928082-chr3:130167943 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AC026765.3--CBFA2T2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC026765.3^ENSG00000257817.2 | chr12:114748210:+ | CBFA2T2^ENSG00000078699.22 | chr20:33640341:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1197:21387:19692,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2434:28401:8300 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:114748210-chr20:33640341 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| AC025171.3--UBE2Q2P2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC025171.3^ENSG00000251131.2 | chr5:43018672:+ | UBE2Q2P2^ENSG00000259429.5 | chr15:82419980:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:3217:5540,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1295:4309:11860 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:43018672-chr15:82419980 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| AC021851.1--NUP35 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC021851.1^ENSG00000272800.3 | chr2:183182680:+ | NUP35^ENSG00000163002.13 | chr2:183151508:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1282:25302:16806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:38335:3256 | . | YES_LDAS | 0.0068 | GT | 1.8062 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]" | chr2:183182680-chr2:183151508 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| AC015712.1--CERS5 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC015712.1^ENSG00000232386.9 | chr15:100855348:+ | CERS5^ENSG00000139624.14 | chr12:50130694:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:3985:2724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2187:49216:22999 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr15--chr12]""]" | chr15:100855348-chr12:50130694 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| AC012313.4--ZNF584 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AC012313.4^ENSG00000268543.1 | chr19:58419327:+ | ZNF584^ENSG00000171574.18 | chr19:58415524:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:22867:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2119:42202:4657 | . | YES_LDAS | 0.0068 | GT | 1.9086 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[233]""]" | chr19:58419327-chr19:58415524 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| AC010974.2--GPR39 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC010974.2^ENSG00000286068.1 | chr2:132686465:+ | GPR39^ENSG00000183840.7 | chr2:132645101:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2462:10886:21934,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2349:51918:14116 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr2:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[38642]""]" | chr2:132686465-chr2:132645101 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | ||||||
| AC005357.2--CCNYL1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC005357.2^ENSG00000267623.3 | chr19:27970524:+ | CCNYL1^ENSG00000163249.13 | chr2:207724800:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:19923:6759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2490:4827:22957 | . | NO_LDAS | 0.0068 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:27970524-chr2:207724800 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | ||||||
| AC004923.1--ENPP7P7 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AC004923.1^ENSG00000254610.3 | chr11:67955482:- | ENPP7P7^ENSG00000273819.1 | chr11:67812753:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1197:40334:16778,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2272:37785:23238 | . | YES_LDAS | 0.0068 | GT | 1.4566 | AG | 1.5219 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr11:0.06Mb]"",""NEIGHBORS[61196]""]" | chr11:67955482-chr11:67812753 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| AC004784.1--CD177 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC004784.1^ENSG00000282943.1 | chr19:43101700:+ | CD177^ENSG00000204936.10 | chr19:43354207:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2461:42793:26923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1188:15408:24471 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.8062 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr19:0.18Mb]""]" | chr19:43101700-chr19:43354207 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| SULT1A3--SLX1A | 2 | 1 | 0.5 | 0.25 | INCL_NON_REF_SPLICE | SULT1A3^ENSG00000261052.6 | chr16:30203988:+ | SLX1A^ENSG00000132207.18 | chr16:30194744:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1410:10595:19356,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2458:5684:8805 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1453:28741:25003 | YES_LDAS | 0.0025 | GT | 1.7968 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[1667]""]" | chr16:30203988-chr16:30194744 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| AC073529.1--MID1 | 2 | 1 | 2.0 | 0.17 | ONLY_REF_SPLICE | AC073529.1^ENSG00000234129.8 | chrX:11038603:- | MID1^ENSG00000101871.16 | chrX:10567603:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1198:38627:2892,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2375:47388:14844 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1368:9592:21962 | YES_LDAS | 0.0074 | GT | 1.8323 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:0.01Mb]"",""NEIGHBORS[13924]""]" | chrX:11038603-chrX:10567603 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| ZXDB--ERP44 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZXDB^ENSG00000198455.5 | chrX:57593599:+ | ERP44^ENSG00000023318.8 | chr9:99979906:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1165:10134:19819 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chrX--chr9]""]" | chrX:57593599-chr9:99979906 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZUP1--RSPH14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZUP1^ENSG00000153975.10 | chr6:116645860:- | RSPH14^ENSG00000100218.12 | chr22:23061868:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2164:42914:4321 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr6--chr22]""]" | chr6:116645860-chr22:23061868 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZSCAN9--HARS2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZSCAN9^ENSG00000137185.13 | chr6:28227057:+ | HARS2^ENSG00000112855.17 | chr5:140697989:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2166:31127:23280 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr6--chr5]""]" | chr6:28227057-chr5:140697989 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNRD2--SLC50A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNRD2^ENSG00000173465.8 | chr11:65570970:+ | SLC50A1^ENSG00000169241.19 | chr1:155137561:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1406:43578:13289 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:65570970-chr1:155137561 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF90P1--RINL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF90P1^ENSG00000241738.1 | chr3:101358777:+ | RINL^ENSG00000187994.14 | chr19:38871870:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:41458:26657 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr19]""]" | chr3:101358777-chr19:38871870 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF852--NTRK1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF852^ENSG00000178917.17 | chr3:44499894:- | NTRK1^ENSG00000198400.13 | chr1:156865615:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:32033:1897 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:44499894-chr1:156865615 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF852--NTRK1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF852^ENSG00000178917.17 | chr3:44499474:- | NTRK1^ENSG00000198400.13 | chr1:156865615:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1339:1485:1897 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:44499474-chr1:156865615 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF814--GLB1L2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF814^ENSG00000204514.10 | chr19:57859367:- | GLB1L2^ENSG00000149328.15 | chr11:134375713:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1359:12027:2836 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:57859367-chr11:134375713 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF775--AC073111.3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF775^ENSG00000196456.13 | chr7:150388501:+ | AC073111.3^ENSG00000284691.1 | chr7:150407584:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2357:29825:3592 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[2072]""]" | chr7:150388501-chr7:150407584 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ZNF75D--AC234771.4 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ZNF75D^ENSG00000186376.15 | chrX:135341768:- | AC234771.4^ENSG00000236491.1 | chrX:135193082:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1383:44799:24569 | . | YES_LDAS | 0.0017 | GT | 1.8062 | AG | 1.9899 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chrX:0.05Mb]"",""NEIGHBORS[54241]""]" | chrX:135341768-chrX:135193082 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ZNF749--AC095032.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF749^ENSG00000186230.7 | chr19:57435667:+ | AC095032.1^ENSG00000224613.7 | chr1:103469370:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:23984:13317 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:57435667-chr1:103469370 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF720--AC098826.1 | 1 | 0 | 0.17 | 0.0 | ONLY_REF_SPLICE | ZNF720^ENSG00000197302.10 | chr16:31723353:+ | AC098826.1^ENSG00000225594.1 | chr2:132087289:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2251:25618:12308 | . | NO_LDAS | 0.0006 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr2]""]" | chr16:31723353-chr2:132087289 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| ZNF708--ZNF766 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF708^ENSG00000182141.10 | chr19:21329210:- | ZNF766^ENSG00000196214.11 | chr19:52283285:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2333:8969:21920 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:30.94Mb]""]" | chr19:21329210-chr19:52283285 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| ZNF700--PLEKHA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF700^ENSG00000196757.8 | chr19:11925273:+ | PLEKHA1^ENSG00000107679.14 | chr10:122393181:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1276:3702:15741 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr10]""]" | chr19:11925273-chr10:122393181 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF668--GSDME | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF668^ENSG00000167394.13 | chr16:31064122:- | GSDME^ENSG00000105928.16 | chr7:24705041:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2244:44613:17156 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr16--chr7]""]" | chr16:31064122-chr7:24705041 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF665--FAM76A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF665^ENSG00000197497.11 | chr19:53191719:- | FAM76A^ENSG00000009780.16 | chr1:27732603:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2453:3362:25522 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.371 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:53191719-chr1:27732603 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| ZNF653--ECSIT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF653^ENSG00000161914.10 | chr19:11505488:- | ECSIT^ENSG00000130159.14 | chr19:11514221:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:28603:21318 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[90]""]" | chr19:11505488-chr19:11514221 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF644--LINC02609 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF644^ENSG00000122482.21 | chr1:90937485:- | LINC02609^ENSG00000233593.10 | chr1:90789487:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1287:13806:14130 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr1:0.06Mb]"",""NEIGHBORS[63640]""]" | chr1:90937485-chr1:90789487 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ZNF644--BARHL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF644^ENSG00000122482.21 | chr1:90937485:- | BARHL2^ENSG00000143032.8 | chr1:90714756:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:7100:9772 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.2867 | "[""INTRACHROMOSOMAL[chr1:0.20Mb]""]" | chr1:90937485-chr1:90714756 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF627--LINC01844 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF627^ENSG00000198551.10 | chr19:11616837:+ | LINC01844^ENSG00000236714.3 | chr5:142756797:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:3702:11958 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:11616837-chr5:142756797 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF613--ZNF684 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF613^ENSG00000176024.18 | chr19:51944782:+ | ZNF684^ENSG00000117010.17 | chr1:40547341:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:25941:29151 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7465 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:51944782-chr1:40547341 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| ZNF589--HEXD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF589^ENSG00000164048.14 | chr3:48247677:+ | HEXD^ENSG00000169660.17 | chr17:82428030:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2288:44379:21542 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:48247677-chr17:82428030 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF587B--ZNF154 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | ZNF587B^ENSG00000269343.9 | chr19:57839149:+ | ZNF154^ENSG00000179909.15 | chr19:57704979:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1490:2917:29431 | . | YES_LDAS | 0.0011 | GT | 1.7819 | AG | 1.9329 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr19:0.11Mb]""]" | chr19:57839149-chr19:57704979 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 1 | ||||||
| ZNF587B--ZNF154 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF587B^ENSG00000269343.9 | chr19:57840908:+ | ZNF154^ENSG00000179909.15 | chr19:57704979:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:39201:24260 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9329 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr19:0.11Mb]""]" | chr19:57840908-chr19:57704979 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 1 | ||||||
| ZNF577--CDC27 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF577^ENSG00000161551.14 | chr19:51839893:- | CDC27^ENSG00000004897.12 | chr17:47132374:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2459:13564:15839 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr19--chr17]""]" | chr19:51839893-chr17:47132374 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF573--TBL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF573^ENSG00000189144.15 | chr19:37758476:- | TBL2^ENSG00000106638.17 | chr7:73571341:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:48415:17997 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr7]""]" | chr19:37758476-chr7:73571341 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF559--ZNF177 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF559^ENSG00000188321.14 | chr19:9341184:+ | ZNF177^ENSG00000188629.13 | chr19:9364862:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1340:35035:13261 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.8062 | "[""ConjoinG"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr19:0.01Mb]"",""NEIGHBORS[11858]""]" | chr19:9341184-chr19:9364862 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| ZNF541--AC011005.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF541^ENSG00000118156.12 | chr19:47532192:- | AC011005.1^ENSG00000230626.4 | chr7:129126662:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:49750:12910 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr19--chr7]""]" | chr19:47532192-chr7:129126662 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF525--SAXO2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ZNF525^ENSG00000203326.12 | chr19:53486758:+ | SAXO2^ENSG00000188659.9 | chr15:82283854:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:33498:18193 | . | NO_LDAS | 0.0008 | GT | 1.8062 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:53486758-chr15:82283854 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF525--SAXO2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ZNF525^ENSG00000203326.12 | chr19:53402191:+ | SAXO2^ENSG00000188659.9 | chr15:82283854:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:33498:18193 | . | NO_LDAS | 0.0008 | GT | 1.8062 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:53402191-chr15:82283854 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF525--SAXO2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ZNF525^ENSG00000203326.12 | chr19:53375896:+ | SAXO2^ENSG00000188659.9 | chr15:82283854:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:33498:18193 | . | NO_LDAS | 0.0008 | GT | 1.8062 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:53375896-chr15:82283854 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF519--FAM122C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF519^ENSG00000175322.12 | chr18:14124350:- | FAM122C^ENSG00000156500.15 | chrX:134845205:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1477:36636:17857 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr18--chrX]""]" | chr18:14124350-chrX:134845205 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF518B--EXOC8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF518B^ENSG00000178163.8 | chr4:10444020:- | EXOC8^ENSG00000116903.7 | chr1:231337836:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2208:29420:29431 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:10444020-chr1:231337836 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF500--LMAN1L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF500^ENSG00000103199.14 | chr16:4765565:- | LMAN1L^ENSG00000140506.17 | chr15:74818718:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1252:38012:12140 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr15]""]" | chr16:4765565-chr15:74818718 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF484--AC025839.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF484^ENSG00000127081.14 | chr9:92855811:- | AC025839.1^ENSG00000287677.2 | chr8:141659226:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:3111:1967 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr9--chr8]""]" | chr9:92855811-chr8:141659226 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF37A--AKR1E2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF37A^ENSG00000075407.18 | chr10:38096632:+ | AKR1E2^ENSG00000165568.18 | chr10:4830675:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1301:7747:14116 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr10:33.25Mb]""]" | chr10:38096632-chr10:4830675 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF343--PRDM7 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ZNF343^ENSG00000088876.13 | chr20:2492699:- | PRDM7^ENSG00000126856.16 | chr16:90058534:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2252:6720:29683 | . | NO_LDAS | 0.0017 | GT | 1.7968 | AG | 1.4566 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr20--chr16]""]" | chr20:2492699-chr16:90058534 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| ZNF337--ZNF80 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF337^ENSG00000130684.14 | chr20:25675979:- | ZNF80^ENSG00000174255.8 | chr3:114236849:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2148:5320:22187 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.9899 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr20--chr3]""]" | chr20:25675979-chr3:114236849 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| ZNF331--MAP3K12 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF331^ENSG00000130844.19 | chr19:53535861:+ | MAP3K12^ENSG00000139625.13 | chr12:53481379:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1168:30868:2429 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr19--chr12]""]" | chr19:53535861-chr12:53481379 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF280D--AC090517.5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF280D^ENSG00000137871.21 | chr15:56689041:- | AC090517.5^ENSG00000285331.2 | chr15:56847481:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:28644:7292 | . | NO_LDAS | 0.0034 | GT | 1.6049 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr15:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[61374]""]" | chr15:56689041-chr15:56847481 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF268--ZNF141 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF268^ENSG00000090612.22 | chr12:133188072:+ | ZNF141^ENSG00000131127.14 | chr4:372664:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1497:39937:5610 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7232 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:133188072-chr4:372664 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| ZNF257--PTCD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF257^ENSG00000197134.13 | chr19:22060628:+ | PTCD2^ENSG00000049883.15 | chr5:72335018:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2166:17318:23994 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:22060628-chr5:72335018 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF251--NLRP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF251^ENSG00000198169.9 | chr8:144755405:- | NLRP2^ENSG00000022556.16 | chr19:54994269:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:28700:24344 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr19]""]" | chr8:144755405-chr19:54994269 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF248--ZNF800 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF248^ENSG00000198105.16 | chr10:37833025:- | ZNF800^ENSG00000048405.10 | chr7:127373479:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:3532:22985 | . | YES_LDAS | 0.0034 | GT | 0.9183 | AG | 1.8062 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:37833025-chr7:127373479 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| ZNF248--C1QTNF12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF248^ENSG00000198105.16 | chr10:37858005:- | C1QTNF12^ENSG00000184163.3 | chr1:1244497:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:3443:3943 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:37858005-chr1:1244497 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF215--SDF2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF215^ENSG00000149054.16 | chr11:6955782:+ | SDF2^ENSG00000132581.10 | chr17:28655483:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2328:36661:27287 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr11--chr17]""]" | chr11:6955782-chr17:28655483 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF215--EPB41L4A-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF215^ENSG00000149054.16 | chr11:6955782:+ | EPB41L4A-AS1^ENSG00000224032.7 | chr5:112161249:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1492:49815:14256 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr11--chr5]""]" | chr11:6955782-chr5:112161249 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF175--SNIP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF175^ENSG00000105497.8 | chr19:51573401:+ | SNIP1^ENSG00000163877.11 | chr1:37540755:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1209:27123:2499 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:51573401-chr1:37540755 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF101--HBEGF | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF101^ENSG00000181896.12 | chr19:19668972:+ | HBEGF^ENSG00000113070.8 | chr5:140346036:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1379:38093:19931 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:19668972-chr5:140346036 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZFYVE26--VIPAS39 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZFYVE26^ENSG00000072121.17 | chr14:67775860:- | VIPAS39^ENSG00000151445.16 | chr14:77457365:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2307:3322:18193 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr14:9.61Mb]""]" | chr14:67775860-chr14:77457365 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZFPM2-AS1--RIOK3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZFPM2-AS1^ENSG00000251003.9 | chr8:106060381:- | RIOK3^ENSG00000101782.15 | chr18:23474948:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1250:43586:18880 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr8--chr18]""]" | chr8:106060381-chr18:23474948 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZFPM2-AS1--MRPS28 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZFPM2-AS1^ENSG00000251003.9 | chr8:106060381:- | MRPS28^ENSG00000147586.10 | chr8:79919148:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1372:41005:27413 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr8:25.52Mb]""]" | chr8:106060381-chr8:79919148 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZFP90--RNF168 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZFP90^ENSG00000184939.16 | chr16:68558568:+ | RNF168^ENSG00000163961.4 | chr3:196503157:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2291:7464:20295 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr16--chr3]""]" | chr16:68558568-chr3:196503157 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZFP69B--ANKRD12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZFP69B^ENSG00000187801.15 | chr1:40457071:+ | ANKRD12^ENSG00000101745.17 | chr18:9263790:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1492:13920:24947 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr1--chr18]""]" | chr1:40457071-chr18:9263790 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZFP30--MYL6B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZFP30^ENSG00000120784.16 | chr19:37644610:- | MYL6B^ENSG00000196465.10 | chr12:56157468:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1251:1081:19833 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr19--chr12]""]" | chr19:37644610-chr12:56157468 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZFAND6--MTHFS | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZFAND6^ENSG00000086666.19 | chr15:80122800:+ | MTHFS^ENSG00000136371.11 | chr15:79845442:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1388:13815:7558 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:0.16Mb]""]" | chr15:80122800-chr15:79845442 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZFAND6--FNTA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZFAND6^ENSG00000086666.19 | chr15:80122800:+ | FNTA^ENSG00000168522.13 | chr8:43064101:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1201:49386:1154 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr15--chr8]""]" | chr15:80122800-chr8:43064101 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZDHHC17--NPIPB10P | 1 | 0 | 0.06 | 0.0 | ONLY_REF_SPLICE | ZDHHC17^ENSG00000186908.15 | chr12:76769201:+ | NPIPB10P^ENSG00000196796.5 | chr16:29050502:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1169:45924:10010 | . | YES_LDAS | 0.0002 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr16]""]" | chr12:76769201-chr16:29050502 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZDHHC14--PREP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZDHHC14^ENSG00000175048.17 | chr6:157382266:+ | PREP^ENSG00000085377.15 | chr6:105288894:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1127:32438:2625 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr6:51.93Mb]""]" | chr6:157382266-chr6:105288894 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZCCHC17--MRPL19 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZCCHC17^ENSG00000121766.16 | chr1:31346657:+ | MRPL19^ENSG00000115364.14 | chr2:75655064:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:13483:5582 | . | NO_LDAS | 0.0034 | GC | 1.2729 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:31346657-chr2:75655064 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZC3H8--IPPK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZC3H8^ENSG00000144161.13 | chr2:112250191:- | IPPK^ENSG00000127080.10 | chr9:92619565:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1109:27778:20225 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:112250191-chr9:92619565 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZBTB8OS--CHRNA5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZBTB8OS^ENSG00000176261.15 | chr1:32650433:- | CHRNA5^ENSG00000169684.13 | chr15:78593092:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2485:16832:5414 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:32650433-chr15:78593092 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZBTB8A--ARHGEF5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZBTB8A^ENSG00000160062.15 | chr1:32605640:+ | ARHGEF5^ENSG00000050327.15 | chr7:144363625:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:33295:7278 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:32605640-chr7:144363625 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZBTB43--TSG101 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZBTB43^ENSG00000169155.10 | chr9:126805178:+ | TSG101^ENSG00000074319.13 | chr11:18506899:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:48205:27946 | . | YES_LDAS | 0.0034 | GT | 1.231 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:126805178-chr11:18506899 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZBTB41--C4BPAP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZBTB41^ENSG00000177888.8 | chr1:197172160:- | C4BPAP1^ENSG00000224462.2 | chr1:207178661:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:25618:17240 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:9.96Mb]""]" | chr1:197172160-chr1:207178661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZBTB34--RALGPS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZBTB34^ENSG00000177125.5 | chr9:126860739:+ | RALGPS1^ENSG00000136828.19 | chr9:126962225:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:10449:14144 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr9:0.03Mb]"",""NEIGHBORS[28896]""]" | chr9:126860739-chr9:126962225 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| Z95114.1--GLUD2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | Z95114.1^ENSG00000279217.1 | chr22:36074848:+ | GLUD2^ENSG00000182890.5 | chrX:121047966:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2236:9389:24555 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr22--chrX]""]" | chr22:36074848-chrX:121047966 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| YTHDC2--SRFBP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | YTHDC2^ENSG00000047188.16 | chr5:113515362:+ | SRFBP1^ENSG00000151304.6 | chr5:121974196:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:21807:29697 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr5:8.37Mb]""]" | chr5:113515362-chr5:121974196 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| YARS2--YIPF3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | YARS2^ENSG00000139131.13 | chr12:32755144:- | YIPF3^ENSG00000137207.12 | chr6:43513165:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1434:4948:18936 | . | NO_LDAS | 0.0034 | AT | 1.6402 | AC | 1.8256 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:32755144-chr6:43513165 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| XYLB--SLC22A14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | XYLB^ENSG00000093217.11 | chr3:38348632:+ | SLC22A14^ENSG00000144671.10 | chr3:38306027:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1202:39719:3971 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr3:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28185]""]" | chr3:38348632-chr3:38306027 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| XYLB--AC006019.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | XYLB^ENSG00000093217.11 | chr3:38395563:+ | AC006019.1^ENSG00000203335.5 | chr7:154055672:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2286:43998:5386 | . | NO_LDAS | 0.0017 | GT | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr7]""]" | chr3:38395563-chr7:154055672 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| WWOX--PAEP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WWOX^ENSG00000186153.17 | chr16:78164289:+ | PAEP^ENSG00000122133.17 | chr9:135566192:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:50487:6311 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr16--chr9]""]" | chr16:78164289-chr9:135566192 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WWOX--AC090771.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WWOX^ENSG00000186153.17 | chr16:78164289:+ | AC090771.2^ENSG00000267686.2 | chr18:60132875:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2257:38796:18095 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr16--chr18]""]" | chr16:78164289-chr18:60132875 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WNT9A--CNN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WNT9A^ENSG00000143816.8 | chr1:227924138:- | CNN3^ENSG00000117519.16 | chr1:94903524:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2181:26144:24793 | . | YES_LDAS | 0.0034 | GC | 1.7968 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr1:132.99Mb]""]" | chr1:227924138-chr1:94903524 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDSUB1--PCNX4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WDSUB1^ENSG00000196151.11 | chr2:159236037:- | PCNX4^ENSG00000126773.13 | chr14:60114700:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2130:39605:16946 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr2--chr14]""]" | chr2:159236037-chr14:60114700 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR74--MUC19 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WDR74^ENSG00000133316.16 | chr11:62833788:- | MUC19^ENSG00000205592.15 | chr12:40488012:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1167:42146:16526 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr11--chr12]""]" | chr11:62833788-chr12:40488012 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| WDR74--AP004290.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | WDR74^ENSG00000133316.16 | chr11:62836023:- | AP004290.1^ENSG00000236583.1 | chr8:99233928:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1454:35965:28688 | . | NO_LDAS | 0.0011 | GT | 1.7465 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:62836023-chr8:99233928 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| WDR74--AP000320.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | WDR74^ENSG00000133316.16 | chr11:62836023:- | AP000320.1^ENSG00000225555.2 | chr21:34354198:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1454:35965:28688 | . | NO_LDAS | 0.0011 | GT | 1.7465 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr11--chr21]""]" | chr11:62836023-chr21:34354198 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| WDR61--DHRS4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR61^ENSG00000140395.9 | chr15:78294946:- | DHRS4^ENSG00000157326.19 | chr14:23959902:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1339:45511:19861 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr14]""]" | chr15:78294946-chr14:23959902 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR49--AC106895.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WDR49^ENSG00000174776.11 | chr3:167554650:- | AC106895.2^ENSG00000251216.2 | chr4:173982968:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:17188:9309 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr4]""]" | chr3:167554650-chr4:173982968 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| WDR41--MOCS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR41^ENSG00000164253.14 | chr5:77449760:- | MOCS2^ENSG00000164172.20 | chr5:53107221:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1115:38376:14816 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr5:24.32Mb]""]" | chr5:77449760-chr5:53107221 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR4--ZNF780B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR4^ENSG00000160193.12 | chr21:42873603:- | ZNF780B^ENSG00000128000.17 | chr19:40050377:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1210:3856:12588 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr21--chr19]""]" | chr21:42873603-chr19:40050377 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR4--PKNOX1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR4^ENSG00000160193.12 | chr21:42850041:- | PKNOX1^ENSG00000160199.15 | chr21:43004326:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1279:16695:7165 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr21:0.09Mb]"",""LOCAL_INVERSION:-:+:[94942]""]" | chr21:42850041-chr21:43004326 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR4--CCNG2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR4^ENSG00000160193.12 | chr21:42850041:- | CCNG2^ENSG00000138764.15 | chr4:77158533:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:41871:13751 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr21--chr4]""]" | chr21:42850041-chr4:77158533 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR20--PSEN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR20^ENSG00000140153.18 | chr14:102140172:+ | PSEN1^ENSG00000080815.19 | chr14:73147795:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1224:46895:2808 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr14:28.92Mb]""]" | chr14:102140172-chr14:73147795 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDFY2--CDKN2B-AS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDFY2^ENSG00000139668.9 | chr13:51584824:+ | CDKN2B-AS1^ENSG00000240498.9 | chr9:22012128:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2471:32664:13359 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr13--chr9]""]" | chr13:51584824-chr9:22012128 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WBP1L--WBP1LP1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | WBP1L^ENSG00000166272.18 | chr10:102812954:+ | WBP1LP1^ENSG00000243661.1 | chr7:142779140:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:42817:29291 | . | NO_LDAS | 0.0011 | GT | 1.7232 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:102812954-chr7:142779140 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| WBP1L--NAA60 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WBP1L^ENSG00000166272.18 | chr10:102814486:+ | NAA60^ENSG00000122390.19 | chr16:3476251:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2332:39104:9435 | . | YES_LDAS | 0.0034 | GT | 1.2729 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr10--chr16]""]" | chr10:102814486-chr16:3476251 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WASHC2A--PKIB | 1 | 0 | 0.13 | 0.0 | ONLY_REF_SPLICE | WASHC2A^ENSG00000099290.17 | chr10:50080931:+ | PKIB^ENSG00000135549.15 | chr6:122482147:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2237:14761:21864 | . | NO_LDAS | 0.0004 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr6]""]" | chr10:50080931-chr6:122482147 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WASHC2A--FOXN3 | 1 | 0 | 0.13 | 0.0 | ONLY_REF_SPLICE | WASHC2A^ENSG00000099290.17 | chr10:50080931:+ | FOXN3^ENSG00000053254.16 | chr14:89333259:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2237:14761:21864 | . | NO_LDAS | 0.0004 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr14]""]" | chr10:50080931-chr14:89333259 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WASHC2A--AL590814.1 | 1 | 0 | 0.13 | 0.0 | ONLY_REF_SPLICE | WASHC2A^ENSG00000099290.17 | chr10:50080931:+ | AL590814.1^ENSG00000285961.1 | chr6:92017127:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2237:14761:21864 | . | NO_LDAS | 0.0004 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr6]""]" | chr10:50080931-chr6:92017127 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WASH8P--HADH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WASH8P^ENSG00000226210.3 | chr12:26801:- | HADH^ENSG00000138796.17 | chr4:108009759:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1265:51700:17520 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:26801-chr4:108009759 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VWDE--FAM149B1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VWDE^ENSG00000146530.14 | chr7:12403659:- | FAM149B1^ENSG00000138286.15 | chr10:73228060:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1340:17075:24443 | . | YES_LDAS | 0.0034 | GT | 1.6049 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:12403659-chr10:73228060 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VRK2--ZNF521 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | VRK2^ENSG00000028116.18 | chr2:58146423:+ | ZNF521^ENSG00000198795.11 | chr18:25225366:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1284:35827:14186 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr2--chr18]""]" | chr2:58146423-chr18:25225366 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| VRK2--PSMG3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VRK2^ENSG00000028116.18 | chr2:58048967:+ | PSMG3^ENSG00000157778.9 | chr7:1569360:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2153:47606:18081 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:58048967-chr7:1569360 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VPS45--PLEKHO1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VPS45^ENSG00000136631.15 | chr1:150110627:+ | PLEKHO1^ENSG00000023902.14 | chr1:150150912:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2237:8459:6100 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.8892 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr1:0.00Mb]"",""NEIGHBORS[3854]""]" | chr1:150110627-chr1:150150912 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| VPS37A--PLEKHA8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VPS37A^ENSG00000155975.10 | chr8:17298158:+ | PLEKHA8^ENSG00000106086.20 | chr7:30074071:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:42882:29347 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:17298158-chr7:30074071 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VPS33A--CYBRD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VPS33A^ENSG00000139719.11 | chr12:122241009:- | CYBRD1^ENSG00000071967.12 | chr2:171553346:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1226:5781:23209 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:122241009-chr2:171553346 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VPS29--BEGAIN | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | VPS29^ENSG00000111237.19 | chr12:110496150:- | BEGAIN^ENSG00000183092.16 | chr14:100538616:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2281:27260:22187 | . | YES_LDAS | 0.0034 | GC | 1.9899 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr12--chr14]""]" | chr12:110496150-chr14:100538616 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VKORC1--HMOX2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VKORC1^ENSG00000167397.15 | chr16:31094557:- | HMOX2^ENSG00000103415.12 | chr16:4505484:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1260:19429:8118 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.5058 | "[""INTRACHROMOSOMAL[chr16:26.58Mb]""]" | chr16:31094557-chr16:4505484 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VASP--PPM1N | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VASP^ENSG00000125753.14 | chr19:45507776:+ | PPM1N^ENSG00000213889.10 | chr19:45488777:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:16395:27749 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.2366 | "[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[4069]""]" | chr19:45507776-chr19:45488777 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VAMP8--VAMP5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | VAMP8^ENSG00000118640.11 | chr2:85581876:+ | VAMP5^ENSG00000168899.5 | chr2:85591725:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1171:6048:9071 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""ConjoinG"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS[2400]""]" | chr2:85581876-chr2:85591725 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| UXT--ATP5F1C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UXT^ENSG00000126756.12 | chrX:47657839:- | ATP5F1C^ENSG00000165629.20 | chr10:7806974:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:15586:4237 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chrX--chr10]""]" | chrX:47657839-chr10:7806974 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UXT--AC025419.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | UXT^ENSG00000126756.12 | chrX:47658826:- | AC025419.1^ENSG00000250748.6 | chr12:65556863:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:48464:19566 | . | NO_LDAS | 0.0011 | GT | 1.8295 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chrX--chr12]""]" | chrX:47658826-chr12:65556863 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| UTP20--CCDC66 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UTP20^ENSG00000120800.5 | chr12:101312276:+ | CCDC66^ENSG00000180376.17 | chr3:56615922:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:31871:15881 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:101312276-chr3:56615922 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UTP18--LINC02073 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UTP18^ENSG00000011260.14 | chr17:51285368:+ | LINC02073^ENSG00000267452.3 | chr17:51440233:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:33781:6773 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr17:0.04Mb]"",""NEIGHBORS[38710]""]" | chr17:51285368-chr17:51440233 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UTP11--INTS13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UTP11^ENSG00000183520.12 | chr1:38023715:+ | INTS13^ENSG00000064102.15 | chr12:26936612:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:39816:14144 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:38023715-chr12:26936612 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UST--AL031056.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UST^ENSG00000111962.8 | chr6:149021481:+ | AL031056.1^ENSG00000228408.6 | chr6:149243729:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1276:45155:22579 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr6:0.14Mb]""]" | chr6:149021481-chr6:149243729 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP5--HSD17B14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | USP5^ENSG00000111667.14 | chr12:6852290:+ | HSD17B14^ENSG00000087076.9 | chr19:48815141:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:3184:10472 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr12--chr19]""]" | chr12:6852290-chr19:48815141 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP49--MED20 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | USP49^ENSG00000164663.14 | chr6:41798724:- | MED20^ENSG00000124641.16 | chr6:41907287:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1431:19421:21528 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8892 | "[""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[9993]""]" | chr6:41798724-chr6:41907287 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP47--RAB19 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | USP47^ENSG00000170242.19 | chr11:11842224:+ | RAB19^ENSG00000146955.11 | chr7:140427497:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:14454:19454 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr11--chr7]""]" | chr11:11842224-chr7:140427497 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP39--AL592146.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | USP39^ENSG00000168883.20 | chr2:85619289:+ | AL592146.2^ENSG00000286572.1 | chr1:204073903:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1124:21071:20295 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:85619289-chr1:204073903 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| USP39--AL162291.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | USP39^ENSG00000168883.20 | chr2:85616371:+ | AL162291.1^ENSG00000263453.1 | chr20:57895398:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:7221:1266 | . | NO_LDAS | 0.0034 | GC | 1.4295 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr2--chr20]""]" | chr2:85616371-chr20:57895398 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| USP38--INIP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | USP38^ENSG00000170185.10 | chr4:143206226:+ | INIP^ENSG00000148153.14 | chr9:112694233:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2423:14866:16722 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr4--chr9]""]" | chr4:143206226-chr9:112694233 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP3-AS1--SNX5P2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | USP3-AS1^ENSG00000259248.7 | chr15:63588829:- | SNX5P2^ENSG00000258033.1 | chr12:101066785:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:5425:6955 | . | YES_LDAS | 0.0017 | GT | 1.7968 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr15--chr12]""]" | chr15:63588829-chr12:101066785 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP3-AS1--OVOL2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | USP3-AS1^ENSG00000259248.7 | chr15:63588829:- | OVOL2^ENSG00000125850.11 | chr20:17957037:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:5425:6955 | . | YES_LDAS | 0.0017 | GT | 1.7968 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr15--chr20]""]" | chr15:63588829-chr20:17957037 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP1--DNTTIP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | USP1^ENSG00000162607.13 | chr1:62443319:+ | DNTTIP2^ENSG00000067334.14 | chr1:93873214:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:8702:8791 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:31.41Mb]""]" | chr1:62443319-chr1:93873214 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UQCR11--NDRG2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UQCR11^ENSG00000127540.12 | chr19:1605360:- | NDRG2^ENSG00000165795.23 | chr14:21024096:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:42995:4629 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr19--chr14]""]" | chr19:1605360-chr14:21024096 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UPK3B--DTX2 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | UPK3B^ENSG00000243566.7 | chr7:76511882:+ | DTX2^ENSG00000091073.19 | chr7:76492153:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2454:38473:22635 | . | NO_LDAS | 0.0008 | GT | 1.8295 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[4530]""]" | chr7:76511882-chr7:76492153 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UPK3B--AC004980.4 | 1 | 0 | 0.04 | 0.0 | INCL_NON_REF_SPLICE | UPK3B^ENSG00000243566.7 | chr7:76511882:+ | AC004980.4^ENSG00000250778.1 | chr7:76521938:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:2505:23448 | . | YES_LDAS | 0.0001 | GT | 1.8295 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:0.01Mb]"",""NEIGHBORS[5089]""]" | chr7:76511882-chr7:76521938 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| UGDH-AS1--PIBF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UGDH-AS1^ENSG00000249348.1 | chr4:39528338:+ | PIBF1^ENSG00000083535.16 | chr13:72998822:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:29728:20827 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr13]""]" | chr4:39528338-chr13:72998822 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UCK1--COL4A2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UCK1^ENSG00000130717.13 | chr9:131529488:- | COL4A2^ENSG00000134871.19 | chr13:110449738:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1204:49653:21598 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr9--chr13]""]" | chr9:131529488-chr13:110449738 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| UBIAD1--RN7SL863P | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | UBIAD1^ENSG00000120942.14 | chr1:11285822:+ | RN7SL863P^ENSG00000244632.3 | chr3:62796262:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:42065:21430 | . | NO_LDAS | 0.0017 | AT | 1.5058 | AC | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:11285822-chr3:62796262 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| UBIAD1--RN7SL452P | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | UBIAD1^ENSG00000120942.14 | chr1:11285822:+ | RN7SL452P^ENSG00000243103.3 | chr14:50637831:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:42065:21430 | . | NO_LDAS | 0.0017 | AT | 1.5058 | AC | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr14]""]" | chr1:11285822-chr14:50637831 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| UBFD1--NUDT21 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBFD1^ENSG00000103353.16 | chr16:23567069:+ | NUDT21^ENSG00000167005.14 | chr16:56434829:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2303:38360:15068 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5301 | "[""INTRACHROMOSOMAL[chr16:32.85Mb]""]" | chr16:23567069-chr16:56434829 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBFD1--ESCO1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBFD1^ENSG00000103353.16 | chr16:23562730:+ | ESCO1^ENSG00000141446.11 | chr18:21568094:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2120:32252:8777 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr16--chr18]""]" | chr16:23562730-chr18:21568094 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBE2T--ABCC8 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | UBE2T^ENSG00000077152.11 | chr1:202335685:- | ABCC8^ENSG00000006071.15 | chr11:17407436:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:20715:14746 | . | NO_LDAS | 0.0017 | GT | 1.7968 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:202335685-chr11:17407436 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| UBE2N--C1orf109 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBE2N^ENSG00000177889.10 | chr12:93411053:- | C1orf109^ENSG00000116922.14 | chr1:37689883:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1240:7610:1210 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:93411053-chr1:37689883 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBE2L3--PI4KAP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBE2L3^ENSG00000185651.15 | chr22:21567771:+ | PI4KAP2^ENSG00000183506.17 | chr22:21492094:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2303:42405:25129 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9656 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr22:0.03Mb]"",""LOCAL_INVERSION:+:-:[31914]""]" | chr22:21567771-chr22:21492094 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBE2G2--TSPEAR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBE2G2^ENSG00000184787.19 | chr21:44787920:- | TSPEAR^ENSG00000175894.18 | chr21:44568005:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1144:4026:22999 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr21:0.06Mb]"",""NEIGHBORS[57008]""]" | chr21:44787920-chr21:44568005 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBE2F--SLC25A45 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UBE2F^ENSG00000184182.19 | chr2:237987992:+ | SLC25A45^ENSG00000162241.12 | chr11:65376060:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1415:51732:15307 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr2--chr11]""]" | chr2:237987992-chr11:65376060 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBE2E2--TGFBR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBE2E2^ENSG00000182247.10 | chr3:23217312:+ | TGFBR2^ENSG00000163513.19 | chr3:30671638:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:14810:25227 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr3:7.01Mb]""]" | chr3:23217312-chr3:30671638 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBAP1--CCDC171 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBAP1^ENSG00000165006.14 | chr9:34179240:+ | CCDC171^ENSG00000164989.17 | chr9:15885690:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2416:21087:16091 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr9:18.12Mb]""]" | chr9:34179240-chr9:15885690 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TYMS--SLC43A3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TYMS^ENSG00000176890.16 | chr18:662320:+ | SLC43A3^ENSG00000134802.18 | chr11:57410121:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:51077:9267 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr18--chr11]""]" | chr18:662320-chr11:57410121 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TYMS--SARNP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TYMS^ENSG00000176890.16 | chr18:662320:+ | SARNP^ENSG00000205323.9 | chr12:55752840:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2160:12763:16077 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr18--chr12]""]" | chr18:662320-chr12:55752840 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TXNRD3--ABHD15 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TXNRD3^ENSG00000197763.20 | chr3:126633960:- | ABHD15^ENSG00000168792.5 | chr17:29562367:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2101:13895:6409 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:126633960-chr17:29562367 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TXNL1--ATP9B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TXNL1^ENSG00000091164.13 | chr18:56638343:- | ATP9B^ENSG00000166377.20 | chr18:79277054:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1442:6404:6100 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr18:22.42Mb]""]" | chr18:56638343-chr18:79277054 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TXNDC15--PCBD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TXNDC15^ENSG00000113621.15 | chr5:134874530:+ | PCBD2^ENSG00000132570.15 | chr5:134959040:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1453:23943:2597 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""NEIGHBORS[3485]""]" | chr5:134874530-chr5:134959040 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TXLNG--F2RL2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TXLNG^ENSG00000086712.13 | chrX:16793786:+ | F2RL2^ENSG00000164220.7 | chr5:76617277:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:38465:3985 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr5]""]" | chrX:16793786-chr5:76617277 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TUBD1--TMTC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TUBD1^ENSG00000108423.15 | chr17:59886083:- | TMTC2^ENSG00000179104.9 | chr12:83132210:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:33716:27876 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr12]""]" | chr17:59886083-chr12:83132210 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TTLL5--DSCR8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TTLL5^ENSG00000119685.20 | chr14:75669522:+ | DSCR8^ENSG00000198054.12 | chr21:38154433:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2458:8127:25844 | . | NO_LDAS | 0.0034 | GT | 1.585 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr14--chr21]""]" | chr14:75669522-chr21:38154433 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TTC23L--LMBRD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TTC23L^ENSG00000205838.14 | chr5:34880308:+ | LMBRD2^ENSG00000164187.7 | chr5:36122961:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:16816:11775 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr5:1.20Mb]""]" | chr5:34880308-chr5:36122961 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TTC21B--GALNT3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TTC21B^ENSG00000123607.16 | chr2:165912514:- | GALNT3^ENSG00000115339.14 | chr2:165755063:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2281:22083:15517 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr2:0.06Mb]"",""NEIGHBORS[62816]""]" | chr2:165912514-chr2:165755063 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TTC12--LINC02495 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TTC12^ENSG00000149292.17 | chr11:113341911:+ | LINC02495^ENSG00000249896.2 | chr4:6222671:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:25116:14578 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr11--chr4]""]" | chr11:113341911-chr4:6222671 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TSTD2--TGFBR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TSTD2^ENSG00000136925.15 | chr9:97617757:- | TGFBR1^ENSG00000106799.13 | chr9:99128855:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1128:5684:28926 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr9:1.47Mb]""]" | chr9:97617757-chr9:99128855 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TSLP--ZNF333 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TSLP^ENSG00000145777.15 | chr5:111071852:+ | ZNF333^ENSG00000160961.12 | chr19:14715424:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1478:27333:4825 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr5--chr19]""]" | chr5:111071852-chr19:14715424 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TSKU--ADSS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TSKU^ENSG00000182704.8 | chr11:76783404:+ | ADSS1^ENSG00000185100.11 | chr14:104735020:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:31402:9463 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr11--chr14]""]" | chr11:76783404-chr14:104735020 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TSKU--ACER3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TSKU^ENSG00000182704.8 | chr11:76783404:+ | ACER3^ENSG00000078124.13 | chr11:76926557:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:43295:10809 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7819 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.06Mb]"",""NEIGHBORS[62706]""]" | chr11:76783404-chr11:76926557 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TRPM4--VN1R28P | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TRPM4^ENSG00000130529.16 | chr19:49189062:+ | VN1R28P^ENSG00000227182.1 | chr7:57423686:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1303:27697:20057 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr19--chr7]""]" | chr19:49189062-chr7:57423686 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TROAP--PBXIP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TROAP^ENSG00000135451.13 | chr12:49329454:+ | PBXIP1^ENSG00000163346.17 | chr1:154945978:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2466:21500:14956 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:49329454-chr1:154945978 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TRMT12--ZHX1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRMT12^ENSG00000183665.5 | chr8:124451257:+ | ZHX1^ENSG00000165156.15 | chr8:123267386:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1378:17131:15012 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr8:1.18Mb]""]" | chr8:124451257-chr8:123267386 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRMT11--GPR161 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRMT11^ENSG00000066651.20 | chr6:126040845:+ | GPR161^ENSG00000143147.14 | chr1:168097232:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2474:24081:2135 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:126040845-chr1:168097232 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRMT11--CENPW | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRMT11^ENSG00000066651.20 | chr6:126174911:+ | CENPW^ENSG00000203760.9 | chr6:126346205:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2167:44937:15110 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:0.14Mb]""]" | chr6:126174911-chr6:126346205 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| TRIM74--STAG3L1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | TRIM74^ENSG00000155428.12 | chr7:72961350:- | STAG3L1^ENSG00000205583.13 | chr7:75385083:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:10781:7712 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:2.39Mb]""]" | chr7:72961350-chr7:75385083 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM67-AS1--FAM89A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM67-AS1^ENSG00000235710.6 | chr1:231186076:- | FAM89A^ENSG00000182118.8 | chr1:231020126:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2493:28417:5442 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr1:0.14Mb]""]" | chr1:231186076-chr1:231020126 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM6--ACER3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRIM6^ENSG00000121236.21 | chr11:5603735:+ | ACER3^ENSG00000078124.13 | chr11:77010862:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2362:12350:15979 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr11:71.25Mb]""]" | chr11:5603735-chr11:77010862 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TRIM55--AC084082.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM55^ENSG00000147573.17 | chr8:66127436:+ | AC084082.1^ENSG00000253190.4 | chr8:66126546:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1444:43254:14858 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[264]""]" | chr8:66127436-chr8:66126546 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM52--RALGAPA2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM52^ENSG00000183718.5 | chr5:181260001:- | RALGAPA2^ENSG00000188559.15 | chr20:20640878:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:37170:25956 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr5--chr20]""]" | chr5:181260001-chr20:20640878 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM52--IMMP2L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM52^ENSG00000183718.5 | chr5:181260001:- | IMMP2L^ENSG00000184903.10 | chr7:111561923:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:48149:29389 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr7]""]" | chr5:181260001-chr7:111561923 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM52--AC240565.1 | 1 | 0 | 0.14 | 0.0 | ONLY_REF_SPLICE | TRIM52^ENSG00000183718.5 | chr5:181260001:- | AC240565.1^ENSG00000280136.2 | chr17:101174:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1432:51385:22775 | . | YES_LDAS | 0.0005 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr5--chr17]""]" | chr5:181260001-chr17:101174 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM4--ZSCAN21 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM4^ENSG00000146833.16 | chr7:99919009:- | ZSCAN21^ENSG00000166529.15 | chr7:100063788:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1293:5514:7137 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr7:0.13Mb]""]" | chr7:99919009-chr7:100063788 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRAM2--BLMH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRAM2^ENSG00000065308.5 | chr6:52576796:- | BLMH^ENSG00000108578.15 | chr17:30289482:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2104:49758:16091 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr17]""]" | chr6:52576796-chr17:30289482 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRAK2--TRUB1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRAK2^ENSG00000115993.13 | chr2:201407403:- | TRUB1^ENSG00000165832.6 | chr10:114959726:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1247:29614:25311 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:201407403-chr10:114959726 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRAK2--GPX8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRAK2^ENSG00000115993.13 | chr2:201394798:- | GPX8^ENSG00000164294.14 | chr5:55166238:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1332:26168:28226 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:201394798-chr5:55166238 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TRAFD1--FAAH | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRAFD1^ENSG00000135148.12 | chr12:112141202:+ | FAAH^ENSG00000117480.16 | chr1:46411612:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2195:48610:5078 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:112141202-chr1:46411612 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRAF3IP1--SPN | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRAF3IP1^ENSG00000204104.12 | chr2:238399239:+ | SPN^ENSG00000197471.12 | chr16:29668635:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2195:9624:25157 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:238399239-chr16:29668635 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TPTEP2--FIRRE | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TPTEP2^ENSG00000244627.5 | chr22:38380370:- | FIRRE^ENSG00000213468.7 | chrX:131794466:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:39193:17016 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr22--chrX]""]" | chr22:38380370-chrX:131794466 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TPST2--CRYBB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TPST2^ENSG00000128294.16 | chr22:26590053:- | CRYBB2^ENSG00000244752.3 | chr22:25221404:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1352:4924:26460 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr22:1.29Mb]""]" | chr22:26590053-chr22:25221404 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TPGS2--CACNB1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TPGS2^ENSG00000134779.15 | chr18:36828683:- | CACNB1^ENSG00000067191.16 | chr17:39175657:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2284:31329:11607 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr18--chr17]""]" | chr18:36828683-chr17:39175657 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TP73--GABRD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TP73^ENSG00000078900.15 | chr1:3683180:+ | GABRD^ENSG00000187730.9 | chr1:2027577:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2465:44476:10949 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr1:1.62Mb]""]" | chr1:3683180-chr1:2027577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TOX3--SVIL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TOX3^ENSG00000103460.17 | chr16:52547035:- | SVIL^ENSG00000197321.15 | chr10:29533393:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2102:12488:9828 | . | NO_LDAS | 0.0034 | GC | 1.8295 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr10]""]" | chr16:52547035-chr10:29533393 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TOPBP1--SRPRB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TOPBP1^ENSG00000163781.14 | chr3:133612389:- | SRPRB^ENSG00000144867.13 | chr3:133825392:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:48011:27525 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr3:0.12Mb]""]" | chr3:133612389-chr3:133825392 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TOMM70--GBE1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TOMM70^ENSG00000154174.8 | chr3:100372606:- | GBE1^ENSG00000114480.13 | chr3:81537095:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2173:5134:11972 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr3:18.60Mb]""]" | chr3:100372606-chr3:81537095 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TOMM7--STEAP1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TOMM7^ENSG00000196683.11 | chr7:22818000:- | STEAP1B^ENSG00000105889.16 | chr7:22632922:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2101:3856:23013 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.09Mb]"",""NEIGHBORS[85015]""]" | chr7:22818000-chr7:22632922 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TOMM22--AC116533.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TOMM22^ENSG00000100216.6 | chr22:38682095:+ | AC116533.1^ENSG00000244398.1 | chr11:16974836:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:2610:26040 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr22--chr11]""]" | chr22:38682095-chr11:16974836 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TOM1--TP63 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TOM1^ENSG00000100284.22 | chr22:35323177:+ | TP63^ENSG00000073282.14 | chr3:189868588:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2454:16225:24597 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr22--chr3]""]" | chr22:35323177-chr3:189868588 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TNNI3K--FPGT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TNNI3K^ENSG00000116783.15 | chr1:74370392:+ | FPGT^ENSG00000254685.7 | chr1:74204391:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1160:12544:17520 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9899 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[1301]""]" | chr1:74370392-chr1:74204391 | False | 0 | Excluded | annotation | pattern: | ConjoinG | FAIL | 1 | ||||||
| TNIK--EIF5A2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TNIK^ENSG00000154310.17 | chr3:171460007:- | EIF5A2^ENSG00000163577.8 | chr3:170894423:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:29606:3270 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9086 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.15Mb]""]" | chr3:171460007-chr3:170894423 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMTC4--UIMC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMTC4^ENSG00000125247.16 | chr13:100670360:- | UIMC1^ENSG00000087206.17 | chr5:176958154:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:13248:2513 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr13--chr5]""]" | chr13:100670360-chr5:176958154 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM79--IGFN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM79^ENSG00000163472.19 | chr1:156286473:+ | IGFN1^ENSG00000163395.17 | chr1:201201719:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2262:10757:24148 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.5219 | "[""INTRACHROMOSOMAL[chr1:44.90Mb]""]" | chr1:156286473-chr1:201201719 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM70--ASAH1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM70^ENSG00000175606.11 | chr8:73976445:+ | ASAH1^ENSG00000104763.20 | chr8:18084008:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:29275:15811 | . | YES_LDAS | 0.0034 | GC | 1.7232 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr8:55.89Mb]""]" | chr8:73976445-chr8:18084008 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM63C--NTN5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM63C^ENSG00000165548.11 | chr14:77116842:+ | NTN5^ENSG00000142233.14 | chr19:48664767:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1497:27187:17324 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr14--chr19]""]" | chr14:77116842-chr19:48664767 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM59--FHAD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM59^ENSG00000116209.12 | chr1:54053000:- | FHAD1^ENSG00000142621.19 | chr1:15308613:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1426:33829:2625 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:38.63Mb]""]" | chr1:54053000-chr1:15308613 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM39A--RSU1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM39A^ENSG00000176142.13 | chr3:119463402:- | RSU1^ENSG00000148484.18 | chr10:16817404:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2123:45268:18011 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:119463402-chr10:16817404 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM38B--FSD1L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM38B^ENSG00000095209.12 | chr9:105694772:+ | FSD1L^ENSG00000106701.13 | chr9:105506399:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2217:8087:14396 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr9:0.14Mb]""]" | chr9:105694772-chr9:105506399 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM266--HMG20A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM266^ENSG00000169758.13 | chr15:76175674:+ | HMG20A^ENSG00000140382.15 | chr15:77458404:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:16573:15419 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr15:1.19Mb]""]" | chr15:76175674-chr15:77458404 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM248--PHLPP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM248^ENSG00000106609.16 | chr7:66948698:+ | PHLPP2^ENSG00000040199.18 | chr16:71678377:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1174:21282:21724 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr7--chr16]""]" | chr7:66948698-chr16:71678377 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMEM248--AC002351.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM248^ENSG00000106609.16 | chr7:66953369:+ | AC002351.1^ENSG00000258240.6 | chr12:110956336:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:36903:26895 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:66953369-chr12:110956336 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM241--BMF | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM241^ENSG00000134490.14 | chr18:23377646:- | BMF^ENSG00000104081.14 | chr15:40108051:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1117:3775:25816 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr18--chr15]""]" | chr18:23377646-chr15:40108051 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMEM221--DPP8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM221^ENSG00000188051.7 | chr19:17436697:- | DPP8^ENSG00000074603.19 | chr15:65517144:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2490:10651:23434 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:17436697-chr15:65517144 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMEM201--EMG1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM201^ENSG00000188807.13 | chr1:9596010:+ | EMG1^ENSG00000126749.16 | chr12:6978321:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:37939:29081 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:9596010-chr12:6978321 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM200B--DMBX1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM200B^ENSG00000253304.2 | chr1:29123856:- | DMBX1^ENSG00000197587.11 | chr1:46506999:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1275:25747:26124 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr1:17.37Mb]""]" | chr1:29123856-chr1:46506999 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM191A--ATP5F1E | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM191A^ENSG00000226287.8 | chr22:20703122:+ | ATP5F1E^ENSG00000124172.10 | chr20:59030429:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1488:15408:7712 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr22--chr20]""]" | chr22:20703122-chr20:59030429 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM184C--PRIM2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM184C^ENSG00000164168.8 | chr4:147631505:+ | PRIM2^ENSG00000146143.19 | chr6:57507387:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:5935:19861 | . | NO_LDAS | 0.0034 | GT | 0.9056 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:147631505-chr6:57507387 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM177--ESR2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM177^ENSG00000144120.13 | chr2:119685754:+ | ESR2^ENSG00000140009.19 | chr14:64230011:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:25553:13849 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr2--chr14]""]" | chr2:119685754-chr14:64230011 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMEM167A--TRAPPC3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM167A^ENSG00000174695.10 | chr5:83057135:- | TRAPPC3^ENSG00000054116.12 | chr1:36156016:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2490:10910:5414 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:83057135-chr1:36156016 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMEM165--MMAB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM165^ENSG00000134851.13 | chr4:55396396:+ | MMAB^ENSG00000139428.12 | chr12:109561852:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1445:25197:8272 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:55396396-chr12:109561852 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM164--AMMECR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM164^ENSG00000157600.12 | chrX:110144876:+ | AMMECR1^ENSG00000101935.11 | chrX:110216632:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1474:10425:1294 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:0.01Mb]"",""LOCAL_INVERSION:+:-:[11452]""]" | chrX:110144876-chrX:110216632 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM161B--PGBD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM161B^ENSG00000164180.14 | chr5:88196376:- | PGBD2^ENSG00000185220.12 | chr1:248917279:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:15756:2906 | . | YES_LDAS | 0.0034 | GT | 1.2729 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:88196376-chr1:248917279 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM14C--JAZF1-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM14C^ENSG00000111843.14 | chr6:10728727:+ | JAZF1-AS1^ENSG00000234336.7 | chr7:28242607:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1207:28409:22018 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:10728727-chr7:28242607 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM147-AS1--SBSN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM147-AS1^ENSG00000236144.8 | chr19:35541751:- | SBSN^ENSG00000189001.11 | chr19:35524924:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:47784:11803 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""NEIGHBORS[12387]""]" | chr19:35541751-chr19:35524924 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TMEM135--ALG9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM135^ENSG00000166575.17 | chr11:87071615:+ | ALG9^ENSG00000086848.15 | chr11:111786520:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1357:1930:9898 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr11:24.45Mb]""]" | chr11:87071615-chr11:111786520 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM106C--LINC00607 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM106C^ENSG00000134291.12 | chr12:47964423:+ | LINC00607^ENSG00000235770.6 | chr2:215701084:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:40819:20897 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.2867 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:47964423-chr2:215701084 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMED9--MEF2C-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMED9^ENSG00000184840.12 | chr5:177592654:+ | MEF2C-AS1^ENSG00000248309.7 | chr5:89075122:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:43748:8090 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr5:88.13Mb]""]" | chr5:177592654-chr5:89075122 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMED3--MINAR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMED3^ENSG00000166557.14 | chr15:79314005:+ | MINAR1^ENSG00000169330.9 | chr15:79463067:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2331:40253:4055 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS[4904]""]" | chr15:79314005-chr15:79463067 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMC5--GSDMB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMC5^ENSG00000103534.17 | chr16:19460334:+ | GSDMB^ENSG00000073605.18 | chr17:39912497:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2109:50300:25101 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr16--chr17]""]" | chr16:19460334-chr17:39912497 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TIMM23B--AGAP12P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TIMM23B^ENSG00000204152.14 | chr10:49958480:+ | AGAP12P^ENSG00000265018.6 | chr10:48033165:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:4066:14578 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr10:1.91Mb]""]" | chr10:49958480-chr10:48033165 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TICAM2--OR10K1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TICAM2^ENSG00000243414.6 | chr5:115580662:- | OR10K1^ENSG00000173285.4 | chr1:158467313:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1292:32292:11061 | . | NO_LDAS | 0.0017 | GT | 1.7968 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:115580662-chr1:158467313 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TIA1--STAMBP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TIA1^ENSG00000116001.17 | chr2:70214349:- | STAMBP^ENSG00000124356.16 | chr2:73844813:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:40868:18655 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr2:3.58Mb]""]" | chr2:70214349-chr2:73844813 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| THUMPD3-AS1--TM7SF3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | THUMPD3-AS1^ENSG00000206573.9 | chr3:9390290:- | TM7SF3^ENSG00000064115.11 | chr12:26999676:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1164:6914:20071 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:9390290-chr12:26999676 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| THUMPD3--PARPBP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | THUMPD3^ENSG00000134077.16 | chr3:9365072:+ | PARPBP^ENSG00000185480.12 | chr12:102151831:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:12375:23364 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:9365072-chr12:102151831 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| THBS1--ORC5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | THBS1^ENSG00000137801.11 | chr15:39593596:+ | ORC5^ENSG00000164815.11 | chr7:104136880:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1342:11638:6983 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr15--chr7]""]" | chr15:39593596-chr7:104136880 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TGFBR1--TEX13B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TGFBR1^ENSG00000106799.13 | chr9:99147779:+ | TEX13B^ENSG00000170925.3 | chrX:107982153:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1338:39476:14900 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr9--chrX]""]" | chr9:99147779-chrX:107982153 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TGFB2--LYSMD1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TGFB2^ENSG00000092969.12 | chr1:218345713:+ | LYSMD1^ENSG00000163155.12 | chr1:151165206:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2403:19154:29529 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr1:67.18Mb]""]" | chr1:218345713-chr1:151165206 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TESK2--ZSWIM5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TESK2^ENSG00000070759.17 | chr1:45355303:- | ZSWIM5^ENSG00000162415.7 | chr1:45060247:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1429:33587:8146 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""NEIGHBORS[37674]""]" | chr1:45355303-chr1:45060247 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TERT--KATNBL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TERT^ENSG00000164362.21 | chr5:1258598:- | KATNBL1^ENSG00000134152.11 | chr15:34209992:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1225:13742:11495 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:1258598-chr15:34209992 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TERF2IP--PAQR6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TERF2IP^ENSG00000166848.7 | chr16:75733610:+ | PAQR6^ENSG00000160781.17 | chr1:156246756:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1431:37154:27918 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr1]""]" | chr16:75733610-chr1:156246756 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TEPSIN--C13orf46 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TEPSIN^ENSG00000167302.11 | chr17:81238986:- | C13orf46^ENSG00000283199.3 | chr13:113970222:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1127:49726:22537 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr13]""]" | chr17:81238986-chr13:113970222 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TDRKH--VSX2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TDRKH^ENSG00000182134.16 | chr1:151775392:- | VSX2^ENSG00000119614.3 | chr14:74262619:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2435:40059:25802 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr14]""]" | chr1:151775392-chr14:74262619 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TDRD5--AXDND1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TDRD5^ENSG00000162782.16 | chr1:179669404:+ | AXDND1^ENSG00000162779.22 | chr1:179525334:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:18450:23602 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[36878]""]" | chr1:179669404-chr1:179525334 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TDRD3--MYOZ3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TDRD3^ENSG00000083544.16 | chr13:60535237:+ | MYOZ3^ENSG00000164591.14 | chr5:150672110:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1261:15513:29641 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr13--chr5]""]" | chr13:60535237-chr5:150672110 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TBRG1--SREK1IP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TBRG1^ENSG00000154144.13 | chr11:124632303:+ | SREK1IP1^ENSG00000153006.16 | chr5:64768640:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1242:41312:3873 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr11--chr5]""]" | chr11:124632303-chr5:64768640 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TBP--GNAI3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TBP^ENSG00000112592.14 | chr6:170571504:+ | GNAI3^ENSG00000065135.12 | chr1:109592498:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1364:3872:25227 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:170571504-chr1:109592498 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TBCEL--TECTA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TBCEL^ENSG00000154114.12 | chr11:121060085:+ | TECTA^ENSG00000109927.11 | chr11:121102665:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:30973:20519 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[10468]""]" | chr11:121060085-chr11:121102665 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TBCE--GGPS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TBCE^ENSG00000284770.2 | chr1:235401587:+ | GGPS1^ENSG00000152904.11 | chr1:235335242:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:19308:17857 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr1:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[22828]""]" | chr1:235401587-chr1:235335242 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TBC1D4--AC011933.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | TBC1D4^ENSG00000136111.14 | chr13:75362071:- | AC011933.1^ENSG00000228007.1 | chr17:75339060:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2102:32964:29291 | . | YES_LDAS | 0.0011 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr17]""]" | chr13:75362071-chr17:75339060 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TBC1D31--AC063926.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TBC1D31^ENSG00000156787.17 | chr8:123077257:+ | AC063926.3^ENSG00000279905.1 | chr12:130430652:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2305:47396:5330 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr12]""]" | chr8:123077257-chr12:130430652 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TBC1D30--INPP4B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TBC1D30^ENSG00000111490.15 | chr12:64843485:+ | INPP4B^ENSG00000109452.12 | chr4:142405324:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2126:28878:7894 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:64843485-chr4:142405324 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TBC1D2--GSTT2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TBC1D2^ENSG00000095383.20 | chr9:98199416:- | GSTT2^ENSG00000099984.11 | chr22:23982898:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2491:8014:1434 | . | YES_LDAS | 0.0017 | GT | 1.8062 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr9--chr22]""]" | chr9:98199416-chr22:23982898 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TBC1D13--SMIM19 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TBC1D13^ENSG00000107021.16 | chr9:128806311:+ | SMIM19^ENSG00000176209.12 | chr8:42546469:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1292:12755:2695 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr9--chr8]""]" | chr9:128806311-chr8:42546469 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TBC1D13--ENDOG | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TBC1D13^ENSG00000107021.16 | chr9:128806311:+ | ENDOG^ENSG00000167136.7 | chr9:128820739:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1237:32454:11481 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr9:0.01Mb]"",""NEIGHBORS[8070]""]" | chr9:128806311-chr9:128820739 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TBC1D10C--FBXO5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TBC1D10C^ENSG00000175463.12 | chr11:67405921:+ | FBXO5^ENSG00000112029.10 | chr6:152982906:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1170:24291:25704 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:67405921-chr6:152982906 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TARDBPP4--AC012485.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TARDBPP4^ENSG00000253555.1 | chr8:63137813:- | AC012485.1^ENSG00000225057.2 | chr2:238231867:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1194:31726:6969 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr8--chr2]""]" | chr8:63137813-chr2:238231867 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TAF9P1--TAF9 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TAF9P1^ENSG00000226353.1 | chrY:17628541:+ | TAF9^ENSG00000273841.5 | chr5:69365270:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:23434:19398 | . | NO_LDAS | 0.0017 | GC | 1.8295 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chrY--chr5]""]" | chrY:17628541-chr5:69365270 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TAF12--MED18 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TAF12^ENSG00000120656.12 | chr1:28613247:- | MED18^ENSG00000130772.14 | chr1:28334417:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:4422:1659 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr1:0.25Mb]""]" | chr1:28613247-chr1:28334417 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SYT14--CARHSP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SYT14^ENSG00000143469.20 | chr1:210168253:+ | CARHSP1^ENSG00000153048.11 | chr16:8855256:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:30642:18768 | . | NO_LDAS | 0.0034 | GT | 1.3753 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:210168253-chr16:8855256 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SYS1--DBNDD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SYS1^ENSG00000204070.10 | chr20:45365686:+ | DBNDD2^ENSG00000244274.8 | chr20:45408460:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2411:15408:16231 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr20:0.03Mb]"",""NEIGHBORS[29259]""]" | chr20:45365686-chr20:45408460 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SYNC--AC141424.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SYNC^ENSG00000162520.15 | chr1:32680109:- | AC141424.1^ENSG00000241525.4 | chr17:414103:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1451:42000:11509 | . | YES_LDAS | 0.0017 | GT | 1.6895 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:32680109-chr17:414103 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SURF1--NTF3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SURF1^ENSG00000148290.10 | chr9:133352694:- | NTF3^ENSG00000185652.12 | chr12:5513151:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1238:3467:28450 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr9--chr12]""]" | chr9:133352694-chr12:5513151 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUPT3H--H1-3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUPT3H^ENSG00000196284.17 | chr6:44961753:- | H1-3^ENSG00000124575.7 | chr6:26234387:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:21371:14480 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr6:18.57Mb]""]" | chr6:44961753-chr6:26234387 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUPT3H--BRIX1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUPT3H^ENSG00000196284.17 | chr6:45020546:- | BRIX1^ENSG00000113460.13 | chr5:34922265:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:35674:2878 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr6--chr5]""]" | chr6:45020546-chr5:34922265 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUPT20H--AL354733.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SUPT20H^ENSG00000102710.20 | chr13:37059559:- | AL354733.2^ENSG00000231616.9 | chr9:83863661:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:39703:7838 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr9]""]" | chr13:37059559-chr9:83863661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SUN3--MRPL30 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SUN3^ENSG00000164744.13 | chr7:48018499:- | MRPL30^ENSG00000185414.20 | chr2:99186177:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1296:39233:8539 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr2]""]" | chr7:48018499-chr2:99186177 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SUMO1--AC005252.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUMO1^ENSG00000116030.17 | chr2:202207259:- | AC005252.3^ENSG00000280415.1 | chr12:125860793:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1342:26087:16484 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr2--chr12]""]" | chr2:202207259-chr12:125860793 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUMF1--FEN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUMF1^ENSG00000144455.14 | chr3:4452999:- | FEN1^ENSG00000168496.4 | chr11:61795913:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2313:39233:25970 | . | NO_LDAS | 0.0034 | AT | 1.9656 | AC | 1.8062 | "[""INTERCHROMOSOMAL[chr3--chr11]""]" | chr3:4452999-chr11:61795913 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUMF1--ARFIP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SUMF1^ENSG00000144455.14 | chr3:4466976:- | ARFIP1^ENSG00000164144.16 | chr4:152910064:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2372:23474:25409 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr4]""]" | chr3:4466976-chr4:152910064 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SUGT1P4--STARD8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUGT1P4^ENSG00000254483.1 | chr9:97250809:+ | STARD8^ENSG00000130052.13 | chrX:68720288:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2346:13726:10150 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr9--chrX]""]" | chr9:97250809-chrX:68720288 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUGT1P4--MYL6B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUGT1P4^ENSG00000254483.1 | chr9:97246186:+ | MYL6B^ENSG00000196465.10 | chr12:56157468:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1155:35957:20715 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr9--chr12]""]" | chr9:97246186-chr12:56157468 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SUCLG2--TAFA4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SUCLG2^ENSG00000172340.15 | chr3:67609455:- | TAFA4^ENSG00000163377.16 | chr3:68753018:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2498:52048:15433 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr3:1.08Mb]""]" | chr3:67609455-chr3:68753018 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SUB1--NBPF15 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | SUB1^ENSG00000113387.12 | chr5:32588572:+ | NBPF15^ENSG00000266338.6 | chr1:144440513:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1203:14826:21444 | . | YES_LDAS | 0.0011 | GT | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:32588572-chr1:144440513 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STXBP5L--IGSF11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STXBP5L^ENSG00000145087.13 | chr3:121240507:+ | IGSF11^ENSG00000144847.13 | chr3:118930275:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2204:34501:5778 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:1.76Mb]""]" | chr3:121240507-chr3:118930275 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STX5--WDR74 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STX5^ENSG00000162236.13 | chr11:62824166:- | WDR74^ENSG00000133316.16 | chr11:62839659:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1390:33514:19314 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""YOSHIHARA_TCGA"",""GTEx_recurrent_StarF2019"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr11:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[291]""]" | chr11:62824166-chr11:62839659 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 1 | ||||||
| STX5--MED26 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STX5^ENSG00000162236.13 | chr11:62831112:- | MED26^ENSG00000105085.11 | chr19:16628012:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1364:34881:1785 | . | NO_LDAS | 0.0034 | GT | 1.2366 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:62831112-chr19:16628012 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| STX12--PPP1R8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STX12^ENSG00000117758.14 | chr1:27819732:+ | PPP1R8^ENSG00000117751.18 | chr1:27832756:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2307:2011:28618 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[6339]""]" | chr1:27819732-chr1:27832756 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| STON1--PPP1R21 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STON1^ENSG00000243244.7 | chr2:48530829:+ | PPP1R21^ENSG00000162869.16 | chr2:48451008:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:50025:23083 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[13992]""]" | chr2:48530829-chr2:48451008 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STK4--NYNRIN | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | STK4^ENSG00000101109.12 | chr20:44972164:+ | NYNRIN^ENSG00000205978.6 | chr14:24417441:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2242:7521:27091 | . | NO_LDAS | 0.0017 | GT | 1.4566 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr20--chr14]""]" | chr20:44972164-chr14:24417441 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| STK11IP--TANC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STK11IP^ENSG00000144589.22 | chr2:219606852:+ | TANC1^ENSG00000115183.15 | chr2:159196758:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:49775:27049 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr2:60.37Mb]""]" | chr2:219606852-chr2:159196758 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STEAP1--RAPGEF5 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | STEAP1^ENSG00000164647.9 | chr7:90162078:+ | RAPGEF5^ENSG00000136237.19 | chr7:22318037:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2129:49936:15363 | . | YES_LDAS | 0.0017 | GT | 1.7465 | AG | 1.8295 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:67.80Mb]""]" | chr7:90162078-chr7:22318037 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| STARD9--AC011498.7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STARD9^ENSG00000159433.12 | chr15:42688231:+ | AC011498.7^ENSG00000280239.1 | chr19:4450252:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:14510:28324 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr15--chr19]""]" | chr15:42688231-chr19:4450252 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STAG3L5P--ADAMTS7P3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STAG3L5P^ENSG00000242294.6 | chr7:100345898:+ | ADAMTS7P3^ENSG00000261143.1 | chr15:77990099:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:45689:18712 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr15]""]" | chr7:100345898-chr15:77990099 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| STAG3L3--HMGCL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STAG3L3^ENSG00000174353.17 | chr7:72999761:- | HMGCL^ENSG00000117305.15 | chr1:23803967:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2277:20812:14186 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:72999761-chr1:23803967 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| STAG3L1--SNX16 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | STAG3L1^ENSG00000205583.13 | chr7:75366438:+ | SNX16^ENSG00000104497.14 | chr8:81839891:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1122:35277:8609 | . | YES_LDAS | 0.0011 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:75366438-chr8:81839891 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SSX2IP--AC008676.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SSX2IP^ENSG00000117155.17 | chr1:84655832:- | AC008676.1^ENSG00000248544.2 | chr5:157376207:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:9058:21262 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:84655832-chr5:157376207 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SSBP1--MGAM | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SSBP1^ENSG00000106028.11 | chr7:141750384:+ | MGAM^ENSG00000257335.8 | chr7:141988933:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1340:4632:19258 | . | YES_LDAS | 0.0017 | GT | 1.8295 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr7:0.12Mb]""]" | chr7:141750384-chr7:141988933 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SSB--METTL5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SSB^ENSG00000138385.16 | chr2:169801026:+ | METTL5^ENSG00000138382.15 | chr2:169821273:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2328:50163:17661 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.2729 | "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[1983]""]" | chr2:169801026-chr2:169821273 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SRP54--DGKH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SRP54^ENSG00000100883.13 | chr14:35019074:+ | DGKH^ENSG00000102780.17 | chr13:42229099:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2149:6218:18501 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr14--chr13]""]" | chr14:35019074-chr13:42229099 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SRIP1--SRI | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SRIP1^ENSG00000248660.1 | chr4:58103246:+ | SRI^ENSG00000075142.14 | chr7:88209439:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1431:39516:4293 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr7]""]" | chr4:58103246-chr7:88209439 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SRFBP1--AC010255.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SRFBP1^ENSG00000151304.6 | chr5:122022407:+ | AC010255.2^ENSG00000250803.6 | chr5:122179550:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1481:14098:7936 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr5:0.05Mb]"",""NEIGHBORS[54052]""]" | chr5:122022407-chr5:122179550 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SRBD1--NFAM1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SRBD1^ENSG00000068784.13 | chr2:45573207:- | NFAM1^ENSG00000235568.7 | chr22:42384462:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1352:38716:23027 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr2--chr22]""]" | chr2:45573207-chr22:42384462 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SPTY2D1--SERGEF | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPTY2D1^ENSG00000179119.15 | chr11:18634198:- | SERGEF^ENSG00000129158.11 | chr11:18008076:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:9341:25451 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr11:0.59Mb]""]" | chr11:18634198-chr11:18008076 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SPTLC1--ZFAND6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPTLC1^ENSG00000090054.15 | chr9:92055405:- | ZFAND6^ENSG00000086666.19 | chr15:80131180:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1229:15465:23840 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr15]""]" | chr9:92055405-chr15:80131180 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SPSB2--P2RX6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SPSB2^ENSG00000111671.10 | chr12:6872226:- | P2RX6^ENSG00000099957.16 | chr22:21028482:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1181:42235:12504 | . | NO_LDAS | 0.0034 | GC | 1.6049 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr22]""]" | chr12:6872226-chr22:21028482 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SPOUT1--KRT15 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SPOUT1^ENSG00000198917.13 | chr9:128827064:- | KRT15^ENSG00000171346.16 | chr17:41515485:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1187:22293:25157 | . | NO_LDAS | 0.0017 | GT | 1.7819 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr9--chr17]""]" | chr9:128827064-chr17:41515485 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SPON1-AS1--RRAS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPON1-AS1^ENSG00000254418.1 | chr11:14273654:- | RRAS2^ENSG00000133818.14 | chr11:14295855:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1322:30529:4027 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr11:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4231]""]" | chr11:14273654-chr11:14295855 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| SPINDOC--SAC3D1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPINDOC^ENSG00000168005.9 | chr11:63819002:+ | SAC3D1^ENSG00000168061.17 | chr11:65044225:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2242:41110:27399 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr11:1.21Mb]""]" | chr11:63819002-chr11:65044225 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SPIN3--PHLPP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPIN3^ENSG00000204271.13 | chrX:56994723:- | PHLPP2^ENSG00000040199.18 | chr16:71644855:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1163:29315:2373 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chrX--chr16]""]" | chrX:56994723-chr16:71644855 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SPIN3--EXOC4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPIN3^ENSG00000204271.13 | chrX:56984266:- | EXOC4^ENSG00000131558.15 | chr7:133288922:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1305:16298:16932 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chrX--chr7]""]" | chrX:56984266-chr7:133288922 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SPESP1--ESAM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPESP1^ENSG00000258484.4 | chr15:68818317:+ | ESAM^ENSG00000149564.12 | chr11:124758527:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2490:30537:19426 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr15--chr11]""]" | chr15:68818317-chr11:124758527 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SPESP1--AC027088.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPESP1^ENSG00000258484.4 | chr15:68818317:+ | AC027088.1^ENSG00000137808.12 | chr15:68974729:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2492:4543:24737 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:0.02Mb]"",""NEIGHBORS_OVERLAP:+:+:[16307]""]" | chr15:68818317-chr15:68974729 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SPCS2P4--PANX1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SPCS2P4^ENSG00000228589.3 | chr1:28096225:- | PANX1^ENSG00000110218.9 | chr11:94178369:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:24259:14466 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:28096225-chr11:94178369 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SPATA17--GULP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPATA17^ENSG00000162814.11 | chr1:217737967:+ | GULP1^ENSG00000144366.16 | chr2:188477659:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2364:31103:1659 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:217737967-chr2:188477659 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| SPAG5--EIF3J | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPAG5^ENSG00000076382.17 | chr17:28579365:- | EIF3J^ENSG00000104131.13 | chr15:44554553:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2266:23312:13723 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chr15]""]" | chr17:28579365-chr15:44554553 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SP100--DYNLRB1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SP100^ENSG00000067066.17 | chr2:230449150:+ | DYNLRB1^ENSG00000125971.17 | chr20:34540581:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1442:44759:18025 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr2--chr20]""]" | chr2:230449150-chr20:34540581 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SP100--AL078622.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SP100^ENSG00000067066.17 | chr2:230470277:+ | AL078622.1^ENSG00000286381.1 | chr22:49051520:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1428:40204:6745 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr2--chr22]""]" | chr2:230470277-chr22:49051520 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SORBS1--PEX3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SORBS1^ENSG00000095637.22 | chr10:95367650:- | PEX3^ENSG00000034693.15 | chr6:143470961:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1269:28563:16792 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr6]""]" | chr10:95367650-chr6:143470961 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SOCS2--LNPK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SOCS2^ENSG00000120833.14 | chr12:93575173:+ | LNPK^ENSG00000144320.14 | chr2:175964589:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1494:48197:10192 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:93575173-chr2:175964589 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNX29P1--CRYM-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNX29P1^ENSG00000158482.10 | chr16:21385932:+ | CRYM-AS1^ENSG00000189149.12 | chr16:21315884:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2315:1372:22999 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr16:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[37611]""]" | chr16:21385932-chr16:21315884 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SNX29P1--AC025279.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SNX29P1^ENSG00000158482.10 | chr16:21385932:+ | AC025279.2^ENSG00000260413.1 | chr16:29326347:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1368:36175:24457 | . | YES_LDAS | 0.0017 | GT | 1.8256 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr16:7.93Mb]""]" | chr16:21385932-chr16:29326347 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SNX12--NUDT19P3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNX12^ENSG00000147164.12 | chrX:71061028:- | NUDT19P3^ENSG00000216723.1 | chr6:114020163:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1242:39241:13233 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chrX--chr6]""]" | chrX:71061028-chr6:114020163 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SNRPF--EFHC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNRPF^ENSG00000139343.10 | chr12:95889181:+ | EFHC1^ENSG00000096093.16 | chr6:52452688:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1347:51797:9225 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:95889181-chr6:52452688 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNRPE--CHMP5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNRPE^ENSG00000182004.13 | chr1:203869920:+ | CHMP5^ENSG00000086065.14 | chr9:33278156:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2405:36742:27567 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:203869920-chr9:33278156 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SNRPD3--CTF1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNRPD3^ENSG00000100028.12 | chr22:24572061:+ | CTF1^ENSG00000150281.7 | chr16:30902862:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:28207:18585 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr22--chr16]""]" | chr22:24572061-chr16:30902862 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNORC--RAMP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNORC^ENSG00000182600.9 | chr2:232876122:+ | RAMP1^ENSG00000132329.11 | chr2:237874645:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:50972:18726 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr2:4.98Mb]""]" | chr2:232876122-chr2:237874645 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNIP1--GNL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNIP1^ENSG00000163877.11 | chr1:37554006:- | GNL2^ENSG00000134697.13 | chr1:37569302:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1372:32899:14045 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3996 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[12523]""]" | chr1:37554006-chr1:37569302 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNHG5--MBD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNHG5^ENSG00000203875.13 | chr6:85677954:- | MBD2^ENSG00000134046.12 | chr18:54205157:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:48504:25493 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr18]""]" | chr6:85677954-chr18:54205157 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNAPC3--MUC6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNAPC3^ENSG00000164975.15 | chr9:15463501:+ | MUC6^ENSG00000184956.16 | chr11:1030386:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2448:8232:13779 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 0.6998 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:15463501-chr11:1030386 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SNAPC3--GUCY2EP | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | SNAPC3^ENSG00000164975.15 | chr9:15458048:+ | GUCY2EP^ENSG00000204529.4 | chr11:76707516:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2306:48804:26180 | . | NO_LDAS | 0.0011 | GT | 1.4566 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:15458048-chr11:76707516 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SNAI3-AS1--SEMA6A-AS1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SNAI3-AS1^ENSG00000260630.7 | chr16:88686547:+ | SEMA6A-AS1^ENSG00000248445.5 | chr5:116447585:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1343:36426:14354 | . | NO_LDAS | 0.0017 | GT | 1.4295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr16--chr5]""]" | chr16:88686547-chr5:116447585 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SMYD3--CEP170P1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SMYD3^ENSG00000185420.19 | chr1:246355031:- | CEP170P1^ENSG00000154608.14 | chr4:118488128:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:49718:4391 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr4]""]" | chr1:246355031-chr4:118488128 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SMIM13--ATP7B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SMIM13^ENSG00000224531.6 | chr6:11094389:+ | ATP7B^ENSG00000123191.16 | chr13:51940477:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2347:36289:9211 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr13]""]" | chr6:11094389-chr13:51940477 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SMIM10L1--LINC01252 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SMIM10L1^ENSG00000256537.5 | chr12:11190111:+ | LINC01252^ENSG00000247157.7 | chr12:11549590:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:42752:13401 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:0.37Mb]""]" | chr12:11190111-chr12:11549590 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SMC6--ZBTB3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SMC6^ENSG00000163029.16 | chr2:17695152:- | ZBTB3^ENSG00000185670.9 | chr11:62753282:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:41636:11691 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr11]""]" | chr2:17695152-chr11:62753282 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| SMC6--NOL10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SMC6^ENSG00000163029.16 | chr2:17753626:- | NOL10^ENSG00000115761.16 | chr2:10644372:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1431:13256:5526 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr2:6.97Mb]""]" | chr2:17753626-chr2:10644372 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SMBD1P--MUC20 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | SMBD1P^ENSG00000283426.1 | chr3:195708841:+ | MUC20^ENSG00000176945.17 | chr3:195724680:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2401:3338:9562 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.371 | "[""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[9241]""]" | chr3:195708841-chr3:195724680 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SMAD6--CDC42EP5 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SMAD6^ENSG00000137834.15 | chr15:66703471:+ | CDC42EP5^ENSG00000167617.3 | chr19:54465163:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:46895:6983 | . | NO_LDAS | 0.0017 | GT | 1.4295 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr15--chr19]""]" | chr15:66703471-chr19:54465163 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLCO6A1--INKA2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLCO6A1^ENSG00000205359.10 | chr5:102458382:- | INKA2^ENSG00000197852.12 | chr1:111680774:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:38796:6157 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:102458382-chr1:111680774 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLCO1A2--AC011029.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLCO1A2^ENSG00000084453.16 | chr12:21395355:- | AC011029.1^ENSG00000287352.1 | chr8:76306467:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1212:21354:28128 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:21395355-chr8:76306467 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SLC6A16--AC011450.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC6A16^ENSG00000063127.16 | chr19:49311084:- | AC011450.1^ENSG00000197813.6 | chr19:49332142:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:45819:17422 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[6310]""]" | chr19:49311084-chr19:49332142 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC50A1--AC010336.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC50A1^ENSG00000169241.19 | chr1:155135991:+ | AC010336.1^ENSG00000214248.2 | chr19:7902246:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1143:15724:22383 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:155135991-chr19:7902246 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC49A3--PAXIP1-DT | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC49A3^ENSG00000169026.13 | chr4:686532:- | PAXIP1-DT^ENSG00000273344.1 | chr7:155003962:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:9891:3228 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr4--chr7]""]" | chr4:686532-chr7:155003962 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC45A1--CDCP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC45A1^ENSG00000162426.16 | chr1:8325349:+ | CDCP2^ENSG00000157211.11 | chr1:54152885:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1298:21314:23574 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:45.79Mb]""]" | chr1:8325349-chr1:54152885 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC45A1--CDCP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC45A1^ENSG00000162426.16 | chr1:8324726:+ | CDCP2^ENSG00000157211.11 | chr1:54152885:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2474:29404:4125 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:45.79Mb]""]" | chr1:8324726-chr1:54152885 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC44A5--CTC-338M12.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC44A5^ENSG00000137968.16 | chr1:75206646:- | CTC-338M12.4^ENSG00000233937.7 | chr5:181256557:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1416:28069:3578 | . | YES_LDAS | 0.0034 | AT | 1.9656 | AC | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:75206646-chr5:181256557 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC41A2--TMTC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC41A2^ENSG00000136052.9 | chr12:104909655:- | TMTC2^ENSG00000179104.9 | chr12:82857010:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:36879:9786 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:21.67Mb]""]" | chr12:104909655-chr12:82857010 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC41A2--PPHLN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC41A2^ENSG00000136052.9 | chr12:104927973:- | PPHLN1^ENSG00000134283.18 | chr12:42459278:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2203:36240:24597 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr12:62.34Mb]""]" | chr12:104927973-chr12:42459278 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC39A1--ARL8A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC39A1^ENSG00000143570.19 | chr1:153960666:- | ARL8A^ENSG00000143862.8 | chr1:202138038:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:34889:7936 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr1:48.17Mb]""]" | chr1:153960666-chr1:202138038 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC38A6--MNAT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC38A6^ENSG00000139974.16 | chr14:61052135:+ | MNAT1^ENSG00000020426.11 | chr14:60968229:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2196:27810:18403 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[11149]""]" | chr14:61052135-chr14:60968229 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC35E4--APLF | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC35E4^ENSG00000100036.13 | chr22:30637069:+ | APLF^ENSG00000169621.10 | chr2:68587808:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1415:2246:12995 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr22--chr2]""]" | chr22:30637069-chr2:68587808 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC35D3--DYNLRB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC35D3^ENSG00000182747.5 | chr6:136924479:+ | DYNLRB1^ENSG00000125971.17 | chr20:34526272:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1449:22964:12616 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr6--chr20]""]" | chr6:136924479-chr20:34526272 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC35B2--UBXN7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC35B2^ENSG00000157593.19 | chr6:44255176:- | UBXN7^ENSG00000163960.12 | chr3:196356846:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1234:11477:19454 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr3]""]" | chr6:44255176-chr3:196356846 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC30A7--AC093157.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC30A7^ENSG00000162695.12 | chr1:100974902:+ | AC093157.1^ENSG00000233184.7 | chr1:101086852:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:28288:24302 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.04Mb]"",""NEIGHBORS[44087]""]" | chr1:100974902-chr1:101086852 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SLC30A6--BRD8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC30A6^ENSG00000152683.14 | chr2:32209561:+ | BRD8^ENSG00000112983.18 | chr5:138172826:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1427:39233:23728 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:32209561-chr5:138172826 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC30A1--EBP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC30A1^ENSG00000170385.10 | chr1:211575436:- | EBP^ENSG00000147155.11 | chrX:48522038:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:48213:17114 | . | NO_LDAS | 0.0034 | AT | 1.8062 | AC | 1.5546 | "[""INTERCHROMOSOMAL[chr1--chrX]""]" | chr1:211575436-chrX:48522038 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC2A9--EMILIN3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC2A9^ENSG00000109667.12 | chr4:9887567:- | EMILIN3^ENSG00000183798.5 | chr20:41360116:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2357:6032:9547 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr4--chr20]""]" | chr4:9887567-chr20:41360116 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC29A3--PAX3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC29A3^ENSG00000198246.9 | chr10:71362366:+ | PAX3^ENSG00000135903.20 | chr2:222298765:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2305:51312:28983 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.1033 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:71362366-chr2:222298765 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC26A7--LRRC69 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC26A7^ENSG00000147606.9 | chr8:91394039:+ | LRRC69^ENSG00000214954.8 | chr8:91102219:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:25019:11691 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS_OVERLAP:+:+:[9742]""]" | chr8:91394039-chr8:91102219 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC25A25--POLA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC25A25^ENSG00000148339.12 | chr9:128106257:+ | POLA1^ENSG00000101868.13 | chrX:24996215:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:42065:1112 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chrX]""]" | chr9:128106257-chrX:24996215 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC25A24--ZNF644 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC25A24^ENSG00000085491.17 | chr1:108181941:- | ZNF644^ENSG00000122482.21 | chr1:90941309:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1261:41968:11201 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr1:17.11Mb]""]" | chr1:108181941-chr1:90941309 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC25A13--ELAPOR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC25A13^ENSG00000004864.14 | chr7:96321942:- | ELAPOR2^ENSG00000164659.15 | chr7:86926916:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2142:36701:25704 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr7:9.06Mb]""]" | chr7:96321942-chr7:86926916 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC1A4--BPNT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC1A4^ENSG00000115902.11 | chr2:65018596:+ | BPNT2^ENSG00000104331.9 | chr8:56980185:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1179:26144:5428 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr2--chr8]""]" | chr2:65018596-chr8:56980185 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC18B1--MED23 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC18B1^ENSG00000146409.12 | chr6:132796982:- | MED23^ENSG00000112282.18 | chr6:131618519:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1358:47518:6353 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr6:1.14Mb]""]" | chr6:132796982-chr6:131618519 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC17A9--AP3M1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC17A9^ENSG00000101194.18 | chr20:62962722:+ | AP3M1^ENSG00000185009.13 | chr10:74138314:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1433:38125:5834 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr20--chr10]""]" | chr20:62962722-chr10:74138314 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC11A2--MYBL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC11A2^ENSG00000110911.17 | chr12:51006174:- | MYBL1^ENSG00000185697.16 | chr8:66599142:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1342:31127:4363 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:51006174-chr8:66599142 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC10A7--ZGRF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC10A7^ENSG00000120519.15 | chr4:146503849:- | ZGRF1^ENSG00000138658.16 | chr4:112589874:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2445:6226:15909 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr4:33.62Mb]""]" | chr4:146503849-chr4:112589874 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLAMF1--PRICKLE1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLAMF1^ENSG00000117090.15 | chr1:160608271:- | PRICKLE1^ENSG00000139174.12 | chr12:42464608:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2126:43982:17661 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:160608271-chr12:42464608 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SKA3--CDRT4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SKA3^ENSG00000165480.16 | chr13:21176375:- | CDRT4^ENSG00000239704.11 | chr17:15440285:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:49176:16988 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr13--chr17]""]" | chr13:21176375-chr17:15440285 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SIX3--AC012354.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SIX3^ENSG00000138083.5 | chr2:44944727:+ | AC012354.1^ENSG00000225156.2 | chr2:44967696:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1491:49605:22243 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.5301 | "[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""NEIGHBORS[8593]""]" | chr2:44944727-chr2:44967696 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SIVA1--SNX30 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SIVA1^ENSG00000184990.13 | chr14:104753312:+ | SNX30^ENSG00000148158.17 | chr9:112874110:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2453:29291:14886 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr14--chr9]""]" | chr14:104753312-chr9:112874110 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SIRT6--ADAT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SIRT6^ENSG00000077463.15 | chr19:4180782:- | ADAT2^ENSG00000189007.16 | chr6:143425062:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2473:43909:17142 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr19--chr6]""]" | chr19:4180782-chr6:143425062 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SIMC1--PSRC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SIMC1^ENSG00000170085.18 | chr5:176337146:+ | PSRC1^ENSG00000134222.16 | chr1:109281251:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1481:39411:18375 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:176337146-chr1:109281251 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SHPK--LINC02395 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SHPK^ENSG00000197417.9 | chr17:3615337:- | LINC02395^ENSG00000257771.6 | chr12:49920006:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1184:29841:13485 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr12]""]" | chr17:3615337-chr12:49920006 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SHC2--COPS9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SHC2^ENSG00000129946.10 | chr19:430684:- | COPS9^ENSG00000172428.11 | chr2:240134005:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:20416:9379 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:430684-chr2:240134005 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SH2B2--PHETA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SH2B2^ENSG00000160999.10 | chr7:102300595:+ | PHETA1^ENSG00000198324.13 | chr12:111362995:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1428:8661:16512 | . | NO_LDAS | 0.0034 | GT | 1.4716 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:102300595-chr12:111362995 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SGPP1--DEGS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SGPP1^ENSG00000126821.8 | chr14:63727261:- | DEGS1^ENSG00000143753.13 | chr1:224189577:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:35488:16568 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr14--chr1]""]" | chr14:63727261-chr1:224189577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SGMS2--ZNF639 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SGMS2^ENSG00000164023.14 | chr4:107858553:+ | ZNF639^ENSG00000121864.10 | chr3:179332989:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1377:23070:7642 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr4--chr3]""]" | chr4:107858553-chr3:179332989 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SGK3--WWP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SGK3^ENSG00000104205.16 | chr8:66712833:+ | WWP1^ENSG00000123124.14 | chr8:86411538:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1179:27017:24204 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr8:19.48Mb]""]" | chr8:66712833-chr8:86411538 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SGK2--L3MBTL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SGK2^ENSG00000101049.17 | chr20:43580061:+ | L3MBTL1^ENSG00000185513.17 | chr20:43528657:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1482:16201:7320 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr20:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8014]""]" | chr20:43580061-chr20:43528657 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SFXN5--IK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SFXN5^ENSG00000144040.13 | chr2:73042488:- | IK^ENSG00000113141.18 | chr5:140651714:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2456:7237:13149 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:73042488-chr5:140651714 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SFXN5--CTAGE4 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | SFXN5^ENSG00000144040.13 | chr2:72968493:- | CTAGE4^ENSG00000225932.3 | chr7:144183513:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2330:37526:11355 | . | NO_LDAS | 0.0007 | GC | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:72968493-chr7:144183513 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SETD6--NDRG4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SETD6^ENSG00000103037.12 | chr16:58515846:+ | NDRG4^ENSG00000103034.14 | chr16:58511213:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:26111:8202 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[1851]""]" | chr16:58515846-chr16:58511213 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SENP7--GK5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SENP7^ENSG00000138468.16 | chr3:101332091:- | GK5^ENSG00000175066.16 | chr3:142225416:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:1218:25171 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr3:40.64Mb]""]" | chr3:101332091-chr3:142225416 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SEMA4C--GGA2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEMA4C^ENSG00000168758.11 | chr2:96863682:- | GGA2^ENSG00000103365.15 | chr16:23486790:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1404:14357:3957 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:96863682-chr16:23486790 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SEMA3F--AC104984.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SEMA3F^ENSG00000001617.12 | chr3:50159734:+ | AC104984.1^ENSG00000264125.1 | chr17:30205996:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2478:4034:1434 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:50159734-chr17:30205996 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SEM1--PARP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEM1^ENSG00000127922.9 | chr7:96709688:- | PARP2^ENSG00000129484.14 | chr14:20354085:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1233:20052:24415 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr7--chr14]""]" | chr7:96709688-chr14:20354085 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SELENOT--SCFD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SELENOT^ENSG00000198843.13 | chr3:150603499:+ | SCFD2^ENSG00000184178.16 | chr4:53313763:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2253:37001:3522 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr3--chr4]""]" | chr3:150603499-chr4:53313763 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SELENOT--POLR2H | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SELENOT^ENSG00000198843.13 | chr3:150603499:+ | POLR2H^ENSG00000163882.9 | chr3:184365467:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2118:33457:11285 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr3:33.73Mb]""]" | chr3:150603499-chr3:184365467 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SELENOF--GTF2B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SELENOF^ENSG00000183291.17 | chr1:86903281:- | GTF2B^ENSG00000137947.12 | chr1:88864114:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:39937:6899 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr1:1.94Mb]""]" | chr1:86903281-chr1:88864114 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SECISBP2L--COPS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SECISBP2L^ENSG00000138593.9 | chr15:49027365:- | COPS2^ENSG00000166200.15 | chr15:49119167:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1171:38513:24471 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9329 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr15:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[59621]""]" | chr15:49027365-chr15:49119167 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SEC62--SLC37A3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEC62^ENSG00000008952.17 | chr3:169977051:+ | SLC37A3^ENSG00000157800.18 | chr7:140382596:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1489:43885:9309 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr3--chr7]""]" | chr3:169977051-chr7:140382596 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SEC61G--AC005520.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SEC61G^ENSG00000132432.14 | chr7:54755781:- | AC005520.2^ENSG00000259065.2 | chr14:73787951:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2360:44735:11509 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr7--chr14]""]" | chr7:54755781-chr14:73787951 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SEC24D--TAF1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEC24D^ENSG00000150961.15 | chr4:118728561:- | TAF1B^ENSG00000115750.17 | chr2:9845220:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1286:18078:26909 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:118728561-chr2:9845220 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SEC24B-AS1--COL25A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEC24B-AS1^ENSG00000247950.7 | chr4:109362752:- | COL25A1^ENSG00000188517.16 | chr4:109302075:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2117:48181:27932 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.5058 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr4:0.04Mb]"",""NEIGHBORS[44723]""]" | chr4:109362752-chr4:109302075 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SEC22A--ABCC5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEC22A^ENSG00000121542.12 | chr3:123201986:+ | ABCC5^ENSG00000114770.17 | chr3:183953270:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2225:29056:6100 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr3:60.65Mb]""]" | chr3:123201986-chr3:183953270 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SEC11A--HSPH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEC11A^ENSG00000140612.14 | chr15:84716025:- | HSPH1^ENSG00000120694.20 | chr13:31148092:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1185:14599:21444 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr15--chr13]""]" | chr15:84716025-chr13:31148092 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SDR9C7--RDH16 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SDR9C7^ENSG00000170426.2 | chr12:56930226:- | RDH16^ENSG00000139547.8 | chr12:56952990:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1392:15141:29193 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9899 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr12:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[17023]""]" | chr12:56930226-chr12:56952990 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 1 | ||||||
| SDCBP2-AS1--DZANK1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SDCBP2-AS1^ENSG00000234684.7 | chr20:1325529:+ | DZANK1^ENSG00000089091.16 | chr20:18398626:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:13912:25802 | . | YES_LDAS | 0.0034 | GT | 1.6049 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr20:17.00Mb]""]" | chr20:1325529-chr20:18398626 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SCLT1--TNNT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SCLT1^ENSG00000151466.12 | chr4:128871361:- | TNNT2^ENSG00000118194.20 | chr1:201372038:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2251:34776:18249 | . | NO_LDAS | 0.0034 | GC | 1.2867 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:128871361-chr1:201372038 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| SCIN--AC013470.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SCIN^ENSG00000006747.15 | chr7:12570985:+ | AC013470.2^ENSG00000226690.8 | chr7:12528902:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2429:25836:16385 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr7:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28355]""]" | chr7:12570985-chr7:12528902 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SAV1--GPHN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SAV1^ENSG00000151748.15 | chr14:50644744:- | GPHN^ENSG00000171723.16 | chr14:66824474:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1285:5959:17801 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr14:15.84Mb]""]" | chr14:50644744-chr14:66824474 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SASH1--SAMD5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SASH1^ENSG00000111961.18 | chr6:148468555:+ | SAMD5^ENSG00000203727.4 | chr6:147508766:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:44500:11944 | . | NO_LDAS | 0.0034 | AT | 1.8892 | TC | 1.7465 | "[""ChimerKB"",""ChimerPub"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.70Mb]""]" | chr6:148468555-chr6:147508766 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| SARDH--AC087623.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SARDH^ENSG00000123453.18 | chr9:133690522:- | AC087623.1^ENSG00000255201.1 | chr8:38421856:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:33465:28114 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr9--chr8]""]" | chr9:133690522-chr8:38421856 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SAMD5--AL033504.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SAMD5^ENSG00000203727.4 | chr6:147509387:+ | AL033504.1^ENSG00000227681.5 | chr6:147733729:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1461:10514:2850 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5219 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]" | chr6:147509387-chr6:147733729 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| SAMD5--AL033504.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SAMD5^ENSG00000203727.4 | chr6:147509387:+ | AL033504.1^ENSG00000227681.5 | chr6:147692400:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:50487:28366 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6895 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]" | chr6:147509387-chr6:147692400 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SAMD13--DNASE2B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SAMD13^ENSG00000203943.9 | chr1:84325748:+ | DNASE2B^ENSG00000137976.8 | chr1:84401901:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:46061:29137 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.4716 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[8527]""]" | chr1:84325748-chr1:84401901 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SAA1--HPS5 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | SAA1^ENSG00000173432.12 | chr11:18269333:+ | HPS5^ENSG00000110756.18 | chr11:18317907:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2196:9373:1350 | . | YES_LDAS | 0.0017 | GT | 1.9656 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""LOCAL_INVERSION:+:-:[8691]""]" | chr11:18269333-chr11:18317907 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| S100A13--RNF11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | S100A13^ENSG00000189171.14 | chr1:153626320:- | RNF11^ENSG00000123091.5 | chr1:51236734:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1367:49281:24653 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr1:102.35Mb]""]" | chr1:153626320-chr1:51236734 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RXYLT1--AMN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RXYLT1^ENSG00000118600.12 | chr12:63785072:+ | AMN1^ENSG00000151743.11 | chr12:31702007:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2455:29355:11888 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr12:32.05Mb]""]" | chr12:63785072-chr12:31702007 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RWDD2B--USP16 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RWDD2B^ENSG00000156253.7 | chr21:29019211:- | USP16^ENSG00000156256.15 | chr21:29027873:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2181:28546:8553 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.2419 | "[""INTRACHROMOSOMAL[chr21:0.01Mb]"",""LOCAL_INVERSION:-:+:[5269]""]" | chr21:29019211-chr21:29027873 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RTCA--MFSD14A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RTCA^ENSG00000137996.13 | chr1:100274965:+ | MFSD14A^ENSG00000156875.14 | chr1:100049909:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1447:16112:15937 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:0.18Mb]""]" | chr1:100274965-chr1:100049909 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RSU1--PGBD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RSU1^ENSG00000148484.18 | chr10:16752539:- | PGBD2^ENSG00000185220.12 | chr1:248917279:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2311:22649:12126 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:16752539-chr1:248917279 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RSU1--MINDY3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RSU1^ENSG00000148484.18 | chr10:16752539:- | MINDY3^ENSG00000148481.14 | chr10:15821726:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1208:4317:29109 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr10:0.73Mb]""]" | chr10:16752539-chr10:15821726 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RSU1--IFT74 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RSU1^ENSG00000148484.18 | chr10:16752539:- | IFT74^ENSG00000096872.17 | chr9:27044742:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1172:34120:24232 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr10--chr9]""]" | chr10:16752539-chr9:27044742 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RSU1--CCDC13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RSU1^ENSG00000148484.18 | chr10:16816973:- | CCDC13^ENSG00000244607.7 | chr3:42758351:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1267:5498:14816 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:16816973-chr3:42758351 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RSPH6A--SLFNL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RSPH6A^ENSG00000104941.8 | chr19:45814710:- | SLFNL1^ENSG00000171790.15 | chr1:41017311:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1337:38125:15110 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:45814710-chr1:41017311 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RRP8--CCHCR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RRP8^ENSG00000132275.11 | chr11:6592720:- | CCHCR1^ENSG00000204536.14 | chr6:31148728:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1316:31880:4265 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:6592720-chr6:31148728 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPUSD3--NDUFB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPUSD3^ENSG00000156990.14 | chr3:9841983:- | NDUFB2^ENSG00000090266.13 | chr7:140706563:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2346:34921:4545 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr3--chr7]""]" | chr3:9841983-chr7:140706563 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPS17P5--AL355375.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPS17P5^ENSG00000060303.5 | chr6:50857435:- | AL355375.1^ENSG00000217067.2 | chr6:62547518:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1376:2885:18081 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr6:11.69Mb]""]" | chr6:50857435-chr6:62547518 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RPP38--TTC21B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPP38^ENSG00000152464.15 | chr10:15102336:+ | TTC21B^ENSG00000123607.16 | chr2:165871020:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2119:22422:26951 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:15102336-chr2:165871020 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPL36AP29--AC018868.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RPL36AP29^ENSG00000224683.1 | chr7:16209154:+ | AC018868.1^ENSG00000231409.3 | chr15:34943290:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1130:5595:24344 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chr15]""]" | chr7:16209154-chr15:34943290 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RPL36A--CENPI | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPL36A^ENSG00000241343.10 | chrX:101391822:+ | CENPI^ENSG00000102384.13 | chrX:101101058:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:51773:21318 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chrX:0.23Mb]""]" | chrX:101391822-chrX:101101058 | True | read_through|ribosomal | genes|RPL36A; | read_through|ribosomal | genes|RPL36A-HNRNPH2 | 0 | Blacklisted | FAIL | 1 | |||||
| RPL34--OSTCP5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL34^ENSG00000109475.17 | chr4:108630141:+ | OSTCP5^ENSG00000234315.1 | chr1:45070290:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1222:26111:27147 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:108630141-chr1:45070290 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPL32P3--FAM177A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPL32P3^ENSG00000251474.6 | chr3:129393635:- | FAM177A1^ENSG00000151327.13 | chr14:35046505:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1352:17334:28842 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr3--chr14]""]" | chr3:129393635-chr14:35046505 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPL23AP8--RPL23AP42 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL23AP8^ENSG00000241582.1 | chr14:34694565:+ | RPL23AP42^ENSG00000234851.4 | chr3:161429579:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2277:31321:17563 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr3]""]" | chr14:34694565-chr3:161429579 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RPF2--ETS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPF2^ENSG00000197498.13 | chr6:110985138:+ | ETS2^ENSG00000157557.13 | chr21:38810035:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2405:28555:7081 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr6--chr21]""]" | chr6:110985138-chr21:38810035 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPEL1--TSSK3 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RPEL1^ENSG00000235376.5 | chr10:103246527:+ | TSSK3^ENSG00000162526.7 | chr1:32362662:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1329:50980:7278 | . | NO_LDAS | 0.0017 | GT | 1.5546 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:103246527-chr1:32362662 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RPA2--HOXA-AS3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPA2^ENSG00000117748.10 | chr1:27914059:- | HOXA-AS3^ENSG00000254369.6 | chr7:27155300:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2240:37818:20351 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:27914059-chr7:27155300 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RNVU1-34--LONRF1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNVU1-34^ENSG00000200997.1 | chr17:58679639:- | LONRF1^ENSG00000154359.13 | chr8:12735400:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1260:19437:22229 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr17--chr8]""]" | chr17:58679639-chr8:12735400 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNVU1-27--KRTDAP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNVU1-27^ENSG00000274210.1 | chr1:148522796:+ | KRTDAP^ENSG00000188508.11 | chr19:35488485:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1283:18240:5358 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:148522796-chr19:35488485 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNVU1-15--PLS3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNVU1-15^ENSG00000207205.1 | chr1:144412764:+ | PLS3^ENSG00000102024.18 | chrX:115645021:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2426:38999:23574 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chrX]""]" | chr1:144412764-chrX:115645021 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNU2-63P--RNF166 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNU2-63P^ENSG00000222724.1 | chr2:88016333:- | RNF166^ENSG00000158717.11 | chr16:88701418:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:51813:25003 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:88016333-chr16:88701418 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNGTT--ZHX2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNGTT^ENSG00000111880.16 | chr6:88678353:- | ZHX2^ENSG00000178764.8 | chr8:122973242:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:4018:16876 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr6--chr8]""]" | chr6:88678353-chr8:122973242 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNF8--AC004637.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF8^ENSG00000112130.17 | chr6:37354275:+ | AC004637.1^ENSG00000267304.1 | chr19:3674156:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:22261:25353 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:37354275-chr19:3674156 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RNF6--CDK8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF6^ENSG00000127870.17 | chr13:26215474:- | CDK8^ENSG00000132964.12 | chr13:26337567:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1363:26257:17310 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr13:0.03Mb]"",""LOCAL_INVERSION:-:+:[31790]""]" | chr13:26215474-chr13:26337567 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNF5--TSBP1-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF5^ENSG00000204308.8 | chr6:32212417:+ | TSBP1-AS1^ENSG00000225914.3 | chr6:32365780:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2113:4535:1743 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr6:0.07Mb]"",""NEIGHBORS[73847]""]" | chr6:32212417-chr6:32365780 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNF24--WDR37 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF24^ENSG00000101236.17 | chr20:4015437:- | WDR37^ENSG00000047056.16 | chr10:1080011:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2143:5797:10290 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr10]""]" | chr20:4015437-chr10:1080011 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNF217--PDSS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF217^ENSG00000146373.16 | chr6:124963426:+ | PDSS2^ENSG00000164494.12 | chr6:107334332:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1247:28393:17450 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr6:17.50Mb]""]" | chr6:124963426-chr6:107334332 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNF2--ACBD6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF2^ENSG00000121481.11 | chr1:185045649:+ | ACBD6^ENSG00000230124.8 | chr1:180397605:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:2586:11061 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:4.54Mb]""]" | chr1:185045649-chr1:180397605 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNF144A--MXD4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF144A^ENSG00000151692.15 | chr2:6996993:+ | MXD4^ENSG00000123933.17 | chr4:2253346:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2325:32907:24148 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:6996993-chr4:2253346 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNF141--IRAG1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF141^ENSG00000110315.7 | chr11:10541122:- | IRAG1^ENSG00000072952.19 | chr11:10652182:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2134:29339:10935 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr11:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[31861]""]" | chr11:10541122-chr11:10652182 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNF139--NDUFV3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF139^ENSG00000170881.5 | chr8:124475290:+ | NDUFV3^ENSG00000160194.18 | chr21:42908864:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2275:3573:27427 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr8--chr21]""]" | chr8:124475290-chr21:42908864 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNASET2--RNGTT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNASET2^ENSG00000026297.16 | chr6:166956097:- | RNGTT^ENSG00000111880.16 | chr6:88614395:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2478:33336:13317 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr6:77.96Mb]""]" | chr6:166956097-chr6:88614395 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RN7SL79P--SPC24 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RN7SL79P^ENSG00000239595.3 | chr17:31465757:+ | SPC24^ENSG00000161888.11 | chr19:11146740:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2486:44775:25115 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr17--chr19]""]" | chr17:31465757-chr19:11146740 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RIOK3--OAS3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RIOK3^ENSG00000101782.15 | chr18:23477205:+ | OAS3^ENSG00000111331.14 | chr12:112964096:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:47873:13499 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr18--chr12]""]" | chr18:23477205-chr12:112964096 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RIOK2--DEPDC1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RIOK2^ENSG00000058729.11 | chr5:97177116:- | DEPDC1B^ENSG00000035499.13 | chr5:60687227:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2416:12172:21724 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr5:36.46Mb]""]" | chr5:97177116-chr5:60687227 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RIOK1--CCDC102A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RIOK1^ENSG00000124784.9 | chr6:7411451:+ | CCDC102A^ENSG00000135736.6 | chr16:57516463:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1285:48650:25101 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:7411451-chr16:57516463 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RINT1--PEX7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RINT1^ENSG00000135249.8 | chr7:105536749:+ | PEX7^ENSG00000112357.14 | chr6:136866627:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2368:17123:10486 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr7--chr6]""]" | chr7:105536749-chr6:136866627 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RGSL1--CMC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RGSL1^ENSG00000121446.20 | chr1:182507266:+ | CMC1^ENSG00000187118.14 | chr3:28316333:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:34719:13947 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:182507266-chr3:28316333 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RGS6--AC005993.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RGS6^ENSG00000182732.18 | chr14:72018942:+ | AC005993.1^ENSG00000266869.2 | chr14:71915873:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:21007:6479 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3833]""]" | chr14:72018942-chr14:71915873 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RGPD1--KCNIP2 | 1 | 0 | 0.14 | 0.0 | INCL_NON_REF_SPLICE | RGPD1^ENSG00000187627.17 | chr2:86984848:+ | KCNIP2^ENSG00000120049.20 | chr10:101826331:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1304:14235:18207 | . | NO_LDAS | 0.0005 | GT | 1.9086 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:86984848-chr10:101826331 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RGMA--NUP50 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RGMA^ENSG00000182175.14 | chr15:93072916:- | NUP50^ENSG00000093000.19 | chr22:45178238:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2148:31847:27301 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr22]""]" | chr15:93072916-chr22:45178238 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RFXANK--GLI2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RFXANK^ENSG00000064490.14 | chr19:19198150:+ | GLI2^ENSG00000074047.22 | chr2:120955341:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:23377:16273 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:19198150-chr2:120955341 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RFX2--E2F1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RFX2^ENSG00000087903.13 | chr19:6016261:- | E2F1^ENSG00000101412.13 | chr20:33678353:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:49047:23770 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr19--chr20]""]" | chr19:6016261-chr20:33678353 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RFK--REL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RFK^ENSG00000135002.12 | chr9:76394090:- | REL^ENSG00000162924.15 | chr2:60920574:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2312:13596:5722 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr9--chr2]""]" | chr9:76394090-chr2:60920574 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RFC1--SOX9-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RFC1^ENSG00000035928.16 | chr4:39351348:- | SOX9-AS1^ENSG00000234899.11 | chr17:72088513:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1452:17277:18908 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr4--chr17]""]" | chr4:39351348-chr17:72088513 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| REXO4--ZCCHC24 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | REXO4^ENSG00000148300.12 | chr9:133417738:- | ZCCHC24^ENSG00000165424.7 | chr10:79432626:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1352:12132:27371 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr9--chr10]""]" | chr9:133417738-chr10:79432626 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RELB--AC105460.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RELB^ENSG00000104856.14 | chr19:45032749:+ | AC105460.1^ENSG00000250920.3 | chr4:103552148:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2272:26742:28268 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr19--chr4]""]" | chr19:45032749-chr4:103552148 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RBM6--ILKAP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RBM6^ENSG00000004534.15 | chr3:49940225:+ | ILKAP^ENSG00000132323.9 | chr2:238194870:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2184:33619:15012 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr3--chr2]""]" | chr3:49940225-chr2:238194870 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RBM47--AC008079.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RBM47^ENSG00000163694.15 | chr4:40437767:- | AC008079.1^ENSG00000280007.1 | chr22:18114308:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2284:47647:17647 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr4--chr22]""]" | chr4:40437767-chr22:18114308 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RBM46--LRAT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RBM46^ENSG00000151962.8 | chr4:154799564:+ | LRAT^ENSG00000121207.12 | chr4:154748189:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2439:41766:4797 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr4:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28093]""]" | chr4:154799564-chr4:154748189 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RBM44--SDF2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RBM44^ENSG00000177483.12 | chr2:237827503:+ | SDF2^ENSG00000132581.10 | chr17:28655483:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1182:45438:1687 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:237827503-chr17:28655483 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RBM41--GRIN2A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RBM41^ENSG00000089682.16 | chrX:107115862:- | GRIN2A^ENSG00000183454.18 | chr16:9755172:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2302:27705:29291 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chrX--chr16]""]" | chrX:107115862-chr16:9755172 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RBAK--AC092032.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RBAK^ENSG00000146587.18 | chr7:5048091:+ | AC092032.2^ENSG00000288620.1 | chr7:4989063:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:36022:28058 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr7:0.06Mb]"",""LOCAL_REARRANGEMENT:+:[56644]""]" | chr7:5048091-chr7:4989063 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RASSF8--DCP1A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RASSF8^ENSG00000123094.15 | chr12:25995130:+ | DCP1A^ENSG00000272886.6 | chr3:53292827:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:47064:24316 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:25995130-chr3:53292827 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RASSF3--TRMT11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RASSF3^ENSG00000153179.13 | chr12:64610743:+ | TRMT11^ENSG00000066651.20 | chr6:125995967:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2480:26241:1420 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:64610743-chr6:125995967 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RASSF3--NPIPB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RASSF3^ENSG00000153179.13 | chr12:64684894:+ | NPIPB2^ENSG00000234719.9 | chr16:11937668:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2487:48424:16077 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr16]""]" | chr12:64684894-chr16:11937668 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RASA1--NUDT12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RASA1^ENSG00000145715.15 | chr5:87338091:+ | NUDT12^ENSG00000112874.10 | chr5:103550971:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1113:8362:18039 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr5:16.16Mb]""]" | chr5:87338091-chr5:103550971 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RARS2--ZWILCH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RARS2^ENSG00000146282.18 | chr6:87529542:- | ZWILCH^ENSG00000174442.12 | chr15:66535933:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1222:4657:5232 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr15]""]" | chr6:87529542-chr15:66535933 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAPGEF6--LYRM7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAPGEF6^ENSG00000158987.22 | chr5:131592383:- | LYRM7^ENSG00000186687.16 | chr5:131199531:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1275:42623:14774 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr5:0.22Mb]""]" | chr5:131592383-chr5:131199531 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAPGEF5--ZAN | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAPGEF5^ENSG00000136237.19 | chr7:22162397:- | ZAN^ENSG00000146839.19 | chr7:100737021:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:16363:26909 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr7:78.38Mb]""]" | chr7:22162397-chr7:100737021 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RAMP1--UBE2F | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAMP1^ENSG00000132329.11 | chr2:237877362:+ | UBE2F^ENSG00000184182.19 | chr2:237973092:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1352:18758:1827 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr2:0.05Mb]"",""NEIGHBORS[54721]""]" | chr2:237877362-chr2:237973092 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RALA--CREBL2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RALA^ENSG00000006451.8 | chr7:39706352:+ | CREBL2^ENSG00000111269.3 | chr12:12637570:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2276:37898:23658 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:39706352-chr12:12637570 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAD54L--ANKRD36C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAD54L^ENSG00000085999.13 | chr1:46260099:+ | ANKRD36C^ENSG00000174501.14 | chr2:95906822:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:17067:5456 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:46260099-chr2:95906822 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAD52--CPSF4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAD52^ENSG00000002016.18 | chr12:916296:- | CPSF4^ENSG00000160917.15 | chr7:99454044:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:45608:23448 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:916296-chr7:99454044 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAD51--DPH5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAD51^ENSG00000051180.17 | chr15:40731157:+ | DPH5^ENSG00000117543.21 | chr1:101001544:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1433:45487:21948 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:40731157-chr1:101001544 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAD18--OXTR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAD18^ENSG00000070950.10 | chr3:8898894:- | OXTR^ENSG00000180914.11 | chr3:8753224:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2197:26411:13205 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[5774]""]" | chr3:8898894-chr3:8753224 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| RABL3--LINC02614 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RABL3^ENSG00000144840.10 | chr3:120730696:- | LINC02614^ENSG00000241288.8 | chr3:125827455:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1420:37793:10668 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:5.08Mb]""]" | chr3:120730696-chr3:125827455 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RABEPK--DNAJC8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RABEPK^ENSG00000136933.17 | chr9:125232745:+ | DNAJC8^ENSG00000126698.11 | chr1:28220895:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:13281:6829 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:125232745-chr1:28220895 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RABEPK--AP001042.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RABEPK^ENSG00000136933.17 | chr9:125228059:+ | AP001042.1^ENSG00000205622.11 | chr21:38917400:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:42178:13163 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr9--chr21]""]" | chr9:125228059-chr21:38917400 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB8B--DENND4A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAB8B^ENSG00000166128.13 | chr15:63189748:+ | DENND4A^ENSG00000174485.16 | chr15:65761438:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2124:31572:27161 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5301 | "[""INTRACHROMOSOMAL[chr15:2.39Mb]""]" | chr15:63189748-chr15:65761438 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB6B--FCHO2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAB6B^ENSG00000154917.11 | chr3:133834575:- | FCHO2^ENSG00000157107.14 | chr5:73087882:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1229:34072:22579 | . | YES_LDAS | 0.0034 | GT | 1.231 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr5]""]" | chr3:133834575-chr5:73087882 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB6B--ABRACL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAB6B^ENSG00000154917.11 | chr3:133838166:- | ABRACL^ENSG00000146386.8 | chr6:139042719:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1475:11493:2752 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr3--chr6]""]" | chr3:133838166-chr6:139042719 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB5A--AC092747.2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | RAB5A^ENSG00000144566.11 | chr3:19951061:+ | AC092747.2^ENSG00000256625.1 | chr12:27139966:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:30189:28604 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:19951061-chr12:27139966 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB40B--ZDHHC11B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAB40B^ENSG00000141542.11 | chr17:82698455:- | ZDHHC11B^ENSG00000206077.14 | chr5:766919:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2166:10748:15923 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chr5]""]" | chr17:82698455-chr5:766919 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB38--AP000676.5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAB38^ENSG00000123892.12 | chr11:88149675:- | AP000676.5^ENSG00000285835.1 | chr11:87964709:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1469:19567:17016 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr11:0.07Mb]"",""NEIGHBORS[67643]""]" | chr11:88149675-chr11:87964709 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| RAB18--RASA1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | RAB18^ENSG00000099246.17 | chr10:27509930:+ | RASA1^ENSG00000145715.15 | chr5:87331348:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2414:48901:19062 | . | NO_LDAS | 0.0017 | GT | 1.9219 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr10--chr5]""]" | chr10:27509930-chr5:87331348 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB18--MRPS10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAB18^ENSG00000099246.17 | chr10:27509930:+ | MRPS10^ENSG00000048544.6 | chr6:42214344:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:41507:23882 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr10--chr6]""]" | chr10:27509930-chr6:42214344 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB18--LINC02680 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAB18^ENSG00000099246.17 | chr10:27509930:+ | LINC02680^ENSG00000285737.1 | chr10:27578371:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1420:29048:3592 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr10:0.02Mb]"",""NEIGHBORS[22191]""]" | chr10:27509930-chr10:27578371 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| QTRT1--KCNC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | QTRT1^ENSG00000213339.9 | chr19:10707382:+ | KCNC1^ENSG00000129159.9 | chr11:17736453:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1256:23927:22383 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:10707382-chr11:17736453 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PXYLP1--GK5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PXYLP1^ENSG00000155893.13 | chr3:141262340:+ | GK5^ENSG00000175066.16 | chr3:142204788:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2270:4624:25690 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr3:0.79Mb]""]" | chr3:141262340-chr3:142204788 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PXMP2--AACS | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PXMP2^ENSG00000176894.10 | chr12:132701369:+ | AACS^ENSG00000081760.17 | chr12:125135791:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2396:41094:28296 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr12:7.54Mb]""]" | chr12:132701369-chr12:125135791 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PXK--KAT2B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PXK^ENSG00000168297.16 | chr3:58412963:+ | KAT2B^ENSG00000114166.8 | chr3:20152332:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1218:12908:28156 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr3:38.18Mb]""]" | chr3:58412963-chr3:20152332 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PUSL1--SLC35E2A | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | PUSL1^ENSG00000169972.12 | chr1:1308720:+ | SLC35E2A^ENSG00000215790.8 | chr1:1739704:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:41499:3186 | . | YES_LDAS | 0.0017 | GT | 1.9899 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:0.41Mb]""]" | chr1:1308720-chr1:1739704 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PUS7--CHMP4A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PUS7^ENSG00000091127.14 | chr7:105470688:- | CHMP4A^ENSG00000254505.11 | chr14:24211491:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1231:29169:7137 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr14]""]" | chr7:105470688-chr14:24211491 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTTG1--TMPO | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTTG1^ENSG00000164611.13 | chr5:160422403:+ | TMPO^ENSG00000120802.14 | chr12:98537475:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2208:33133:1560 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr5--chr12]""]" | chr5:160422403-chr12:98537475 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTS--NQO2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTS^ENSG00000150787.8 | chr11:112226526:+ | NQO2^ENSG00000124588.22 | chr6:3006468:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1142:8200:28044 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:112226526-chr6:3006468 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTPRN2--PTPRN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTPRN2^ENSG00000155093.19 | chr7:157568902:- | PTPRN^ENSG00000054356.14 | chr2:219296345:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2407:8540:8342 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.6729 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr7--chr2]""]" | chr7:157568902-chr2:219296345 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| PTPN9--SNUPN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTPN9^ENSG00000169410.10 | chr15:75517259:- | SNUPN^ENSG00000169371.14 | chr15:75621056:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:11355:15124 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4295 | "[""INTRACHROMOSOMAL[chr15:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[18768]""]" | chr15:75517259-chr15:75621056 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTK6--RNF121 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTK6^ENSG00000101213.7 | chr20:63533551:- | RNF121^ENSG00000137522.18 | chr11:71994719:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2347:10805:12854 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr20--chr11]""]" | chr20:63533551-chr11:71994719 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTGR2--FOXN2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PTGR2^ENSG00000140043.11 | chr14:73879305:+ | FOXN2^ENSG00000170802.16 | chr2:48378856:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2246:5288:17338 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr2]""]" | chr14:73879305-chr2:48378856 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTAR1--OR51G2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PTAR1^ENSG00000188647.13 | chr9:69759853:- | OR51G2^ENSG00000176893.5 | chr11:4915098:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:31240:20393 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:69759853-chr11:4915098 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PSTPIP2--ITPKB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PSTPIP2^ENSG00000152229.18 | chr18:45991902:- | ITPKB^ENSG00000143772.9 | chr1:226631838:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:3136:9211 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr18--chr1]""]" | chr18:45991902-chr1:226631838 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PSTK--LINC-PINT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSTK^ENSG00000179988.15 | chr10:122983470:+ | LINC-PINT^ENSG00000231721.7 | chr7:130945835:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1149:5838:15853 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:122983470-chr7:130945835 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSORS1C1--DGKH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSORS1C1^ENSG00000204540.11 | chr6:31114891:+ | DGKH^ENSG00000102780.17 | chr13:42129552:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1372:40706:25045 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr6--chr13]""]" | chr6:31114891-chr13:42129552 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSMD7--PM20D2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSMD7^ENSG00000103035.11 | chr16:74301652:+ | PM20D2^ENSG00000146281.6 | chr6:89149265:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:24210:11439 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr16--chr6]""]" | chr16:74301652-chr6:89149265 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSMD12--AC103764.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PSMD12^ENSG00000197170.10 | chr17:67366412:- | AC103764.1^ENSG00000251218.1 | chr8:134851563:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:12480:21388 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr17--chr8]""]" | chr17:67366412-chr8:134851563 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSMC1--KREMEN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PSMC1^ENSG00000100764.14 | chr14:90259193:+ | KREMEN1^ENSG00000183762.13 | chr22:29144956:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:42841:5176 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr22]""]" | chr14:90259193-chr22:29144956 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSEN2--ABCB10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSEN2^ENSG00000143801.18 | chr1:226889049:+ | ABCB10^ENSG00000135776.5 | chr1:229531731:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1352:19550:22257 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr1:2.59Mb]""]" | chr1:226889049-chr1:229531731 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRR5--HECW2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRR5^ENSG00000186654.21 | chr22:44726634:+ | HECW2^ENSG00000138411.13 | chr2:196240494:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:34282:1869 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr22--chr2]""]" | chr22:44726634-chr2:196240494 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PRR14--HYAL2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRR14^ENSG00000156858.12 | chr16:30656180:+ | HYAL2^ENSG00000068001.14 | chr3:50319942:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:6445:12476 | . | YES_LDAS | 0.0034 | GC | 1.6402 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr3]""]" | chr16:30656180-chr3:50319942 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRPF4--OTULINL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRPF4^ENSG00000136875.13 | chr9:113282711:+ | OTULINL^ENSG00000145569.6 | chr5:14581799:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2450:37106:12616 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr9--chr5]""]" | chr9:113282711-chr5:14581799 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PRPF39--MAP4K5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRPF39^ENSG00000185246.18 | chr14:45114950:+ | MAP4K5^ENSG00000012983.11 | chr14:50468771:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1364:36434:28240 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr14:5.30Mb]""]" | chr14:45114950-chr14:50468771 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRPF38A--KDM4E | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRPF38A^ENSG00000134748.13 | chr1:52412624:+ | KDM4E^ENSG00000235268.2 | chr11:95026625:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1275:39306:13429 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:52412624-chr11:95026625 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PRKAR1B--ZNF18 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRKAR1B^ENSG00000188191.15 | chr7:727590:- | ZNF18^ENSG00000154957.14 | chr17:11992517:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1318:27875:11846 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr17]""]" | chr7:727590-chr17:11992517 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRKACB--KCNQ4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRKACB^ENSG00000142875.19 | chr1:84078371:+ | KCNQ4^ENSG00000117013.17 | chr1:40817265:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1205:12811:23195 | . | YES_LDAS | 0.0034 | GT | 1.5546 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr1:43.24Mb]""]" | chr1:84078371-chr1:40817265 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRKAA1--AC113385.3 | 1 | 0 | 0.07 | 0.0 | ONLY_REF_SPLICE | PRKAA1^ENSG00000132356.11 | chr5:40798063:- | AC113385.3^ENSG00000275374.1 | chr5:100381398:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:39209:17268 | . | YES_LDAS | 0.0002 | GT | 1.8323 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr5:59.58Mb]""]" | chr5:40798063-chr5:100381398 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRIM2--CMTM3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRIM2^ENSG00000146143.19 | chr6:57318480:+ | CMTM3^ENSG00000140931.20 | chr16:66609883:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2474:3168:7754 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:57318480-chr16:66609883 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRH1--ITPR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRH1^ENSG00000231887.7 | chr12:10973655:- | ITPR2^ENSG00000123104.12 | chr12:26387594:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:36159:25998 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr12:15.16Mb]""]" | chr12:10973655-chr12:26387594 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRH1--ERGIC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRH1^ENSG00000231887.7 | chr12:11171422:- | ERGIC2^ENSG00000087502.18 | chr12:29371670:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2428:35973:23770 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr12:18.17Mb]""]" | chr12:11171422-chr12:29371670 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRELID3A--COG7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRELID3A^ENSG00000141391.14 | chr18:12422341:+ | COG7^ENSG00000168434.13 | chr16:23434718:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:43772:14998 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr18--chr16]""]" | chr18:12422341-chr16:23434718 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRDX6-AS1--TNFSF4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRDX6-AS1^ENSG00000203739.4 | chr1:173460378:- | TNFSF4^ENSG00000117586.11 | chr1:173188569:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:46361:4153 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:0.21Mb]""]" | chr1:173460378-chr1:173188569 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| PRDX6-AS1--TNFSF4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRDX6-AS1^ENSG00000203739.4 | chr1:173476632:- | TNFSF4^ENSG00000117586.11 | chr1:173207185:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:39783:7726 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr1:0.21Mb]""]" | chr1:173476632-chr1:173207185 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| PRDM5--STXBP5L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRDM5^ENSG00000138738.11 | chr4:120818349:- | STXBP5L^ENSG00000145087.13 | chr3:121422522:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2389:38756:8721 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr4--chr3]""]" | chr4:120818349-chr3:121422522 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PRCP--AASDHPPT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRCP^ENSG00000137509.12 | chr11:82900235:- | AASDHPPT^ENSG00000149313.11 | chr11:106079467:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2420:17528:16596 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr11:23.10Mb]""]" | chr11:82900235-chr11:106079467 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PPWD1--PLCB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PPWD1^ENSG00000113593.12 | chr5:65563421:+ | PLCB1^ENSG00000182621.18 | chr20:8628361:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1258:1793:9351 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chr20]""]" | chr5:65563421-chr20:8628361 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PPT2--AL031595.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PPT2^ENSG00000221988.13 | chr6:32157924:+ | AL031595.3^ENSG00000280434.1 | chr22:44151887:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:43367:10682 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr6--chr22]""]" | chr6:32157924-chr22:44151887 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PPP1R7--SLC44A4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PPP1R7^ENSG00000115685.15 | chr2:241182717:+ | SLC44A4^ENSG00000204385.13 | chr6:31863742:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2248:8443:4531 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr2--chr6]""]" | chr2:241182717-chr6:31863742 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PPP1R14C--TSC22D4 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | PPP1R14C^ENSG00000198729.5 | chr6:150143405:+ | TSC22D4^ENSG00000166925.9 | chr7:100478281:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2309:51182:10542 | . | NO_LDAS | 0.0011 | GT | 1.5301 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:150143405-chr7:100478281 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PPM1L--NMD3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPM1L^ENSG00000163590.14 | chr3:160961910:+ | NMD3^ENSG00000169251.13 | chr3:161156971:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2346:45730:11495 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:0.03Mb]"",""NEIGHBORS[25794]""]" | chr3:160961910-chr3:161156971 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PPIP5K1--CATSPER2P1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPIP5K1^ENSG00000168781.22 | chr15:43564867:- | CATSPER2P1^ENSG00000205771.6 | chr15:43745170:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1422:6339:5204 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:0.14Mb]""]" | chr15:43564867-chr15:43745170 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PPIH--DESI1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPIH^ENSG00000171960.12 | chr1:42663543:+ | DESI1^ENSG00000100418.8 | chr22:41604153:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:31289:15937 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr22]""]" | chr1:42663543-chr22:41604153 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PPHLN1--MLH3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PPHLN1^ENSG00000134283.18 | chr12:42393689:+ | MLH3^ENSG00000119684.16 | chr14:75046589:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:46830:17072 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr14]""]" | chr12:42393689-chr14:75046589 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PPARD--PCCA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPARD^ENSG00000112033.14 | chr6:35347150:+ | PCCA^ENSG00000175198.17 | chr13:100330561:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2498:19356:8160 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr6--chr13]""]" | chr6:35347150-chr13:100330561 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| POLR3G--UPF3A | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | POLR3G^ENSG00000113356.13 | chr5:90506674:+ | UPF3A^ENSG00000169062.15 | chr13:114298840:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:6056:15811 | . | YES_LDAS | 0.0017 | GT | 1.2729 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr5--chr13]""]" | chr5:90506674-chr13:114298840 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| POLE4--AC007681.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | POLE4^ENSG00000115350.12 | chr2:74960146:+ | AC007681.1^ENSG00000270571.2 | chr2:75186830:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2183:47728:4055 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.6402 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.18Mb]""]" | chr2:74960146-chr2:75186830 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| POLD3--RNF169 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | POLD3^ENSG00000077514.9 | chr11:74640841:+ | RNF169^ENSG00000166439.6 | chr11:74789626:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1436:5409:4069 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.8323 | "[""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.08Mb]"",""NEIGHBORS[79732]""]" | chr11:74640841-chr11:74789626 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| POLA1--NDUFV2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | POLA1^ENSG00000101868.13 | chrX:24699549:+ | NDUFV2^ENSG00000178127.13 | chr18:9126831:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1171:4721:13499 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrX--chr18]""]" | chrX:24699549-chr18:9126831 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| POGLUT3--NPIPB10P | 1 | 0 | 0.08 | 0.0 | ONLY_REF_SPLICE | POGLUT3^ENSG00000178202.13 | chr11:108478024:- | NPIPB10P^ENSG00000196796.5 | chr16:29050502:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2463:47186:22313 | . | NO_LDAS | 0.0003 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr16]""]" | chr11:108478024-chr16:29050502 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| POGK--TXNRD3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | POGK^ENSG00000143157.12 | chr1:166850268:+ | TXNRD3^ENSG00000197763.20 | chr3:126646207:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1225:40795:5302 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:166850268-chr3:126646207 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| POFUT1--IFFO1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | POFUT1^ENSG00000101346.14 | chr20:32234577:+ | IFFO1^ENSG00000010295.20 | chr12:6555287:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1175:18248:9239 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr20--chr12]""]" | chr20:32234577-chr12:6555287 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PMS2P12--AC004980.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PMS2P12^ENSG00000228546.2 | chr7:102339115:+ | AC004980.4^ENSG00000250778.1 | chr7:76521943:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1474:29032:6086 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr7:25.82Mb]""]" | chr7:102339115-chr7:76521943 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PLGLA--AC083899.1 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | PLGLA^ENSG00000240935.6 | chr2:106391020:+ | AC083899.1^ENSG00000204745.4 | chr2:87138256:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:29525:15545 | . | NO_LDAS | 0.0008 | GT | 1.8295 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr2:19.19Mb]""]" | chr2:106391020-chr2:87138256 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PLEKHN1--EMSY | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PLEKHN1^ENSG00000187583.11 | chr1:973256:+ | EMSY^ENSG00000158636.16 | chr11:76496361:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1335:39096:6983 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:973256-chr11:76496361 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PLEK2--MRPS21 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PLEK2^ENSG00000100558.9 | chr14:67412018:- | MRPS21^ENSG00000266472.6 | chr1:150308048:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1110:17957:22943 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr1]""]" | chr14:67412018-chr1:150308048 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PLCL2--GRM7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PLCL2^ENSG00000154822.18 | chr3:16885366:+ | GRM7^ENSG00000196277.16 | chr3:7146452:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1176:17787:27693 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:9.06Mb]""]" | chr3:16885366-chr3:7146452 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PLCB1--PLCB4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PLCB1^ENSG00000182621.18 | chr20:8790261:+ | PLCB4^ENSG00000101333.18 | chr20:9468571:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1113:16719:17324 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5329 | "[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr20:0.10Mb]""]" | chr20:8790261-chr20:9468571 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 1 | ||||||
| PLA2G12A--NECAB3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PLA2G12A^ENSG00000123739.11 | chr4:109712956:- | NECAB3^ENSG00000125967.17 | chr20:33674386:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1121:21152:15419 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr4--chr20]""]" | chr4:109712956-chr20:33674386 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PKIB--SERINC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PKIB^ENSG00000135549.15 | chr6:122610535:+ | SERINC1^ENSG00000111897.7 | chr6:122458681:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:13944:17591 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""LOCAL_INVERSION:+:-:[127]""]" | chr6:122610535-chr6:122458681 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PKD1P6--AP000944.2 | 1 | 0 | 0.14 | 0.0 | INCL_NON_REF_SPLICE | PKD1P6^ENSG00000250251.6 | chr16:15137754:- | AP000944.2^ENSG00000277599.1 | chr11:65423963:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1229:49419:4657 | . | NO_LDAS | 0.0005 | GT | 1.7968 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr16--chr11]""]" | chr16:15137754-chr11:65423963 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PIR--OFD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PIR^ENSG00000087842.11 | chrX:15491162:- | OFD1^ENSG00000046651.15 | chrX:13735248:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2275:14073:26026 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chrX:1.62Mb]""]" | chrX:15491162-chrX:13735248 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PIP4P2--NDUFAF6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PIP4P2^ENSG00000155099.8 | chr8:91008743:- | NDUFAF6^ENSG00000156170.13 | chr8:95031995:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2282:37745:15517 | . | YES_LDAS | 0.0034 | GT | 1.5546 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr8:3.85Mb]""]" | chr8:91008743-chr8:95031995 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PIP4K2A--PARG | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | PIP4K2A^ENSG00000150867.14 | chr10:22714183:- | PARG^ENSG00000227345.9 | chr10:49879830:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2188:5417:25970 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr10:27.10Mb]""]" | chr10:22714183-chr10:49879830 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PINX1--RP1L1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PINX1^ENSG00000254093.9 | chr8:10820193:- | RP1L1^ENSG00000183638.6 | chr8:10678251:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1340:17018:20393 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]" | chr8:10820193-chr8:10678251 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PIGZ--ANKIB1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PIGZ^ENSG00000119227.8 | chr3:196951821:- | ANKIB1^ENSG00000001629.10 | chr7:92294889:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2101:11363:22985 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr3--chr7]""]" | chr3:196951821-chr7:92294889 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PIGF--CFAP70 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PIGF^ENSG00000151665.13 | chr2:46592475:- | CFAP70^ENSG00000156042.18 | chr10:73299101:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1168:2796:28716 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:46592475-chr10:73299101 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PIBF1--DTWD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PIBF1^ENSG00000083535.16 | chr13:72965404:+ | DTWD1^ENSG00000104047.15 | chr15:49634536:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1164:47922:16526 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr13--chr15]""]" | chr13:72965404-chr15:49634536 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PHKA2--PDHA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PHKA2^ENSG00000044446.12 | chrX:18943710:- | PDHA1^ENSG00000131828.14 | chrX:19349312:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2432:2286:7292 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chrX:0.36Mb]""]" | chrX:18943710-chrX:19349312 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PGM5--GSDMB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PGM5^ENSG00000154330.13 | chr9:68479553:+ | GSDMB^ENSG00000073605.18 | chr17:39909924:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1136:37065:20729 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr9--chr17]""]" | chr9:68479553-chr17:39909924 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PGLS--GAPDHP72 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PGLS^ENSG00000130313.7 | chr19:17511960:+ | GAPDHP72^ENSG00000216624.3 | chr6:166064249:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2286:39686:12518 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr19--chr6]""]" | chr19:17511960-chr6:166064249 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PFDN4--RUNDC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PFDN4^ENSG00000101132.10 | chr20:54208167:+ | RUNDC1^ENSG00000198863.7 | chr17:42991543:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:19923:16063 | . | YES_LDAS | 0.0034 | AT | 1.2729 | AC | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr17]""]" | chr20:54208167-chr17:42991543 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PEG10--COPS7A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PEG10^ENSG00000242265.6 | chr7:94664123:+ | COPS7A^ENSG00000111652.10 | chr12:6729358:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1402:4851:6241 | . | YES_LDAS | 0.0034 | AT | 1.9086 | AC | 1.5656 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:94664123-chr12:6729358 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDXP--STXBP3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PDXP^ENSG00000241360.2 | chr22:37665796:+ | STXBP3^ENSG00000116266.11 | chr1:108807436:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:8305:10598 | . | YES_LDAS | 0.0034 | GC | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:37665796-chr1:108807436 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDSS2--SNX3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PDSS2^ENSG00000164494.12 | chr6:107459133:- | SNX3^ENSG00000112335.15 | chr6:108223045:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:45285:12070 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr6:0.75Mb]""]" | chr6:107459133-chr6:108223045 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDHA1--ERLEC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PDHA1^ENSG00000131828.14 | chrX:19350081:+ | ERLEC1^ENSG00000068912.14 | chr2:53794373:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:49095:20827 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chrX--chr2]""]" | chrX:19350081-chr2:53794373 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDGFA--PRKAR1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PDGFA^ENSG00000197461.13 | chr7:518939:- | PRKAR1B^ENSG00000188191.15 | chr7:711527:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2427:15845:4545 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5656 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[28901]""]" | chr7:518939-chr7:711527 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDE5A--ARHGAP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PDE5A^ENSG00000138735.16 | chr4:119516961:- | ARHGAP1^ENSG00000175220.12 | chr11:46677675:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1292:24429:12826 | . | YES_LDAS | 0.0034 | AT | 1.9899 | AC | 1.7465 | "[""INTERCHROMOSOMAL[chr4--chr11]""]" | chr4:119516961-chr11:46677675 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDCD4--COX17 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PDCD4^ENSG00000150593.18 | chr10:110875989:+ | COX17^ENSG00000138495.7 | chr3:119675233:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1178:6064:15461 | . | YES_LDAS | 0.0017 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:110875989-chr3:119675233 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDCD2L--FRG1CP | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | PDCD2L^ENSG00000126249.8 | chr19:34413847:+ | FRG1CP^ENSG00000282826.2 | chr20:28591519:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2313:42469:9576 | . | YES_LDAS | 0.0017 | GT | 1.8062 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr20]""]" | chr19:34413847-chr20:28591519 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDC-AS1--ODR4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PDC-AS1^ENSG00000229739.4 | chr1:186436573:+ | ODR4^ENSG00000157181.16 | chr1:186406083:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1217:8742:20883 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2103]""]" | chr1:186436573-chr1:186406083 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PCSK4--GHRL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCSK4^ENSG00000115257.15 | chr19:1483939:- | GHRL^ENSG00000157017.16 | chr3:10289823:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2425:7957:23644 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:1483939-chr3:10289823 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PCNP--EDRF1-DT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PCNP^ENSG00000081154.12 | chr3:101574279:+ | EDRF1-DT^ENSG00000224023.10 | chr10:125709567:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1486:24615:6283 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:101574279-chr10:125709567 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PCLO--AC016065.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCLO^ENSG00000186472.20 | chr7:83134250:- | AC016065.1^ENSG00000246089.3 | chr8:6404527:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:47695:15741 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:83134250-chr8:6404527 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PCDHGB2--ADGRV1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCDHGB2^ENSG00000253910.2 | chr5:141362556:+ | ADGRV1^ENSG00000164199.18 | chr5:90720935:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2108:29226:21444 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr5:50.20Mb]""]" | chr5:141362556-chr5:90720935 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PCDHGB1--PCDHGA10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCDHGB1^ENSG00000254221.2 | chr5:141352669:+ | PCDHGA10^ENSG00000253846.2 | chr5:141494807:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1473:6938:19440 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.3383 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr5:0.06Mb]"",""NEIGHBORS[60294]""]" | chr5:141352669-chr5:141494807 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| PCDH7--LINC02497 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PCDH7^ENSG00000169851.15 | chr4:30920369:+ | LINC02497^ENSG00000251182.2 | chr4:31176621:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1149:45641:2261 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7819 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr4:0.02Mb]"",""NEIGHBORS[24208]""]" | chr4:30920369-chr4:31176621 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| PCCA--CLYBL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PCCA^ENSG00000175198.17 | chr13:100157340:+ | CLYBL^ENSG00000125246.15 | chr13:99858861:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1459:18272:4741 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""YOSHIHARA_TCGA"",""Klijn_CellLines"",""GUO2018CR_TCGA"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr13:0.19Mb]""]" | chr13:100157340-chr13:99858861 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PCBP4--C19orf48 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PCBP4^ENSG00000090097.22 | chr3:51958790:- | C19orf48^ENSG00000167747.15 | chr19:50802257:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1209:27875:5204 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr3--chr19]""]" | chr3:51958790-chr19:50802257 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PCAT1--LGALS8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCAT1^ENSG00000253438.4 | chr8:126557266:+ | LGALS8^ENSG00000116977.19 | chr1:236541696:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1221:46021:22593 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.371 | "[""INTERCHROMOSOMAL[chr8--chr1]""]" | chr8:126557266-chr1:236541696 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PC--FMNL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PC^ENSG00000173599.15 | chr11:66871052:- | FMNL1^ENSG00000184922.14 | chr17:45241493:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2402:37996:26657 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr11--chr17]""]" | chr11:66871052-chr17:45241493 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PBX3--MB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PBX3^ENSG00000167081.18 | chr9:125778103:+ | MB^ENSG00000198125.13 | chr22:35617265:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1292:50543:24989 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr9--chr22]""]" | chr9:125778103-chr22:35617265 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| PARP8--RASA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PARP8^ENSG00000151883.19 | chr5:50668125:+ | RASA1^ENSG00000145715.15 | chr5:87331348:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2142:17512:12476 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr5:36.42Mb]""]" | chr5:50668125-chr5:87331348 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PARN--THUMPD1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | PARN^ENSG00000140694.17 | chr16:14599904:- | THUMPD1^ENSG00000066654.14 | chr16:20739071:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:27899:10514 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr16:6.07Mb]""]" | chr16:14599904-chr16:20739071 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PARN--RNF38 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PARN^ENSG00000140694.17 | chr16:14578531:- | RNF38^ENSG00000137075.18 | chr9:36376127:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2373:22786:7067 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr9]""]" | chr16:14578531-chr9:36376127 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PARM1--PAK1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PARM1^ENSG00000169116.11 | chr4:74933370:+ | PAK1^ENSG00000149269.10 | chr11:77397045:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1188:40965:18684 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr4--chr11]""]" | chr4:74933370-chr11:77397045 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PARG--TIMM23 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PARG^ENSG00000227345.9 | chr10:49941509:- | TIMM23^ENSG00000265354.4 | chr10:45975454:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1370:37324:4111 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr10:3.81Mb]""]" | chr10:49941509-chr10:45975454 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PARD6G--ZCCHC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PARD6G^ENSG00000178184.16 | chr18:80202710:- | ZCCHC2^ENSG00000141664.10 | chr18:62539681:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1143:21112:1168 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr18:17.57Mb]""]" | chr18:80202710-chr18:62539681 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PARD6G--FHOD3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PARD6G^ENSG00000178184.16 | chr18:80202710:- | FHOD3^ENSG00000134775.15 | chr18:36576451:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2122:12221:25255 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr18:43.38Mb]""]" | chr18:80202710-chr18:36576451 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PAQR3--PAOX | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PAQR3^ENSG00000163291.14 | chr4:78939040:- | PAOX^ENSG00000148832.16 | chr10:133388956:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1341:9664:9562 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr4--chr10]""]" | chr4:78939040-chr10:133388956 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PAPOLG--AC026124.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PAPOLG^ENSG00000115421.13 | chr2:60782774:+ | AC026124.1^ENSG00000250280.2 | chr12:65285963:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:3767:7081 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr2--chr12]""]" | chr2:60782774-chr12:65285963 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PAM16--TXNL4A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PAM16^ENSG00000217930.8 | chr16:4351232:- | TXNL4A^ENSG00000141759.15 | chr18:79977701:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2427:20214:13961 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr16--chr18]""]" | chr16:4351232-chr18:79977701 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PAIP2--AP001636.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PAIP2^ENSG00000120727.13 | chr5:139363926:+ | AP001636.3^ENSG00000255240.6 | chr11:59048410:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1281:41806:24905 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr5--chr11]""]" | chr5:139363926-chr11:59048410 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PACRGL--RFX3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PACRGL^ENSG00000163138.19 | chr4:20727397:+ | RFX3^ENSG00000080298.15 | chr9:3293258:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1467:26726:14844 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr4--chr9]""]" | chr4:20727397-chr9:3293258 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PABPC1P3--PABPC1P12 | 1 | 0 | 0.14 | 0.0 | INCL_NON_REF_SPLICE | PABPC1P3^ENSG00000230673.3 | chrX:74583103:- | PABPC1P12^ENSG00000225638.1 | chr10:38638030:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:16573:5162 | . | NO_LDAS | 0.0005 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrX--chr10]""]" | chrX:74583103-chr10:38638030 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| P4HA2--SMAD9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | P4HA2^ENSG00000072682.20 | chr5:132227586:- | SMAD9^ENSG00000120693.14 | chr13:36872842:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1466:6477:13569 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr5--chr13]""]" | chr5:132227586-chr13:36872842 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| P3H3--ADA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | P3H3^ENSG00000110811.20 | chr12:6839413:+ | ADA^ENSG00000196839.13 | chr20:44620905:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:30059:5064 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:6839413-chr20:44620905 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| OXR1--LINC01425 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OXR1^ENSG00000164830.19 | chr8:106679292:+ | LINC01425^ENSG00000233997.5 | chr21:21748395:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1172:11808:5176 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr21]""]" | chr8:106679292-chr21:21748395 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| OVGP1--WDR77 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OVGP1^ENSG00000085465.13 | chr1:111423543:- | WDR77^ENSG00000116455.14 | chr1:111444124:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1113:18086:19580 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[12155]""]" | chr1:111423543-chr1:111444124 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| OSTF1P1--ACVR1B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OSTF1P1^ENSG00000258244.1 | chr12:114588465:+ | ACVR1B^ENSG00000135503.13 | chr12:51994018:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:1421:16694 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:62.59Mb]""]" | chr12:114588465-chr12:51994018 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| OSMR-AS1--CSNK1G1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OSMR-AS1^ENSG00000249740.3 | chr5:38845668:- | CSNK1G1^ENSG00000169118.18 | chr15:64216713:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:25666:22425 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:38845668-chr15:64216713 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| OSBPL6--ZIC4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OSBPL6^ENSG00000079156.17 | chr2:178306286:+ | ZIC4^ENSG00000174963.18 | chr3:147405719:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2180:10579:10472 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:178306286-chr3:147405719 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| OSBPL11--NFKBIZ | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OSBPL11^ENSG00000144909.8 | chr3:125582910:- | NFKBIZ^ENSG00000144802.11 | chr3:101854578:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1154:33611:20883 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr3:23.67Mb]""]" | chr3:125582910-chr3:101854578 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ORC5--UPF3A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ORC5^ENSG00000164815.11 | chr7:104188251:- | UPF3A^ENSG00000169062.15 | chr13:114298840:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1143:48246:18852 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr7--chr13]""]" | chr7:104188251-chr13:114298840 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ORC5--PUS7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ORC5^ENSG00000164815.11 | chr7:104161072:- | PUS7^ENSG00000091127.14 | chr7:105482440:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2443:4374:23069 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr7:1.23Mb]""]" | chr7:104161072-chr7:105482440 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ORC5--ARMC10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ORC5^ENSG00000164815.11 | chr7:104161072:- | ARMC10^ENSG00000170632.14 | chr7:103097277:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2367:30787:1757 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr7:1.03Mb]""]" | chr7:104161072-chr7:103097277 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| OR5AK2--AL136295.17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OR5AK2^ENSG00000181273.2 | chr11:56988978:+ | AL136295.17^ENSG00000287765.1 | chr14:24189460:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2419:37203:13541 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr11--chr14]""]" | chr11:56988978-chr14:24189460 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| OR52D1--ATP6AP2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | OR52D1^ENSG00000181609.5 | chr11:5489697:+ | ATP6AP2^ENSG00000182220.15 | chrX:40589573:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2486:22422:7025 | . | NO_LDAS | 0.0008 | GT | 1.3383 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr11--chrX]""]" | chr11:5489697-chrX:40589573 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| OR51I2--MST1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OR51I2^ENSG00000187918.5 | chr11:5453927:+ | MST1^ENSG00000173531.15 | chr3:49688203:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1173:14915:19524 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:5453927-chr3:49688203 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| OPA1--AL162393.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | OPA1^ENSG00000198836.11 | chr3:193643618:+ | AL162393.1^ENSG00000232905.2 | chr9:113850794:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1313:23781:13555 | . | NO_LDAS | 0.0011 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr9]""]" | chr3:193643618-chr9:113850794 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| OFD1--ZBED1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OFD1^ENSG00000046651.15 | chrX:13755242:+ | ZBED1^ENSG00000214717.12 | chrX:2490769:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2266:16630:5792 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chrX:11.23Mb]""]" | chrX:13755242-chrX:2490769 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NUDCD3--ISM2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NUDCD3^ENSG00000015676.18 | chr7:44485008:- | ISM2^ENSG00000100593.18 | chr14:77475222:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:2335:3060 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr14]""]" | chr7:44485008-chr14:77475222 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NUDCD3--AUP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NUDCD3^ENSG00000015676.18 | chr7:44385334:- | AUP1^ENSG00000115307.17 | chr2:74527757:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2346:40220:1252 | . | NO_LDAS | 0.0034 | AT | 1.7465 | AC | 1.7232 | "[""INTERCHROMOSOMAL[chr7--chr2]""]" | chr7:44385334-chr2:74527757 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NTN1--AL121929.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NTN1^ENSG00000065320.9 | chr17:9179956:+ | AL121929.3^ENSG00000287419.1 | chr10:103583698:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:28029:18081 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr17--chr10]""]" | chr17:9179956-chr10:103583698 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NTAN1--C19orf71 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NTAN1^ENSG00000157045.9 | chr16:15047449:- | C19orf71^ENSG00000183397.5 | chr19:3543287:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2386:11355:14284 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr16--chr19]""]" | chr16:15047449-chr19:3543287 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NT5M--ARMH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NT5M^ENSG00000205309.14 | chr17:17323245:+ | ARMH1^ENSG00000198520.12 | chr1:44692928:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:29113:13569 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:17323245-chr1:44692928 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NT5DC3--AC024901.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NT5DC3^ENSG00000111696.12 | chr12:103806322:- | AC024901.1^ENSG00000255910.2 | chr12:20009721:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2378:6809:12938 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr12:83.76Mb]""]" | chr12:103806322-chr12:20009721 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NSUN6--DCTD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NSUN6^ENSG00000241058.4 | chr10:18651129:- | DCTD^ENSG00000129187.15 | chr4:182915575:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1314:7553:25858 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr4]""]" | chr10:18651129-chr4:182915575 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NSF--SEMA4C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NSF^ENSG00000073969.18 | chr17:46749862:+ | SEMA4C^ENSG00000168758.11 | chr2:96861019:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1261:14753:22831 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:46749862-chr2:96861019 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NSDHL--TICAM2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NSDHL^ENSG00000147383.11 | chrX:152867673:+ | TICAM2^ENSG00000243414.6 | chr5:115579948:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2465:27195:23672 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chrX--chr5]""]" | chrX:152867673-chr5:115579948 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NRIP1--LINC02246 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NRIP1^ENSG00000180530.11 | chr21:15064745:- | LINC02246^ENSG00000281903.2 | chr21:14857708:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1283:47040:27693 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.5546 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.04Mb]"",""NEIGHBORS[42683]""]" | chr21:15064745-chr21:14857708 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| NRIP1--LINC02246 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NRIP1^ENSG00000180530.11 | chr21:15014344:- | LINC02246^ENSG00000281903.2 | chr21:14857708:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1337:46563:12294 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5546 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.04Mb]"",""NEIGHBORS[42683]""]" | chr21:15014344-chr21:14857708 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| NR2F1-AS1--SLC4A7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NR2F1-AS1^ENSG00000237187.9 | chr5:93544795:- | SLC4A7^ENSG00000033867.16 | chr3:27437526:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1247:46126:21626 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr5--chr3]""]" | chr5:93544795-chr3:27437526 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NR2F1--BUB1B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NR2F1^ENSG00000175745.14 | chr5:93593749:+ | BUB1B^ENSG00000156970.13 | chr15:40185551:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1112:50470:24106 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:93593749-chr15:40185551 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NR2E1--FAM177A1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NR2E1^ENSG00000112333.12 | chr6:108166715:+ | FAM177A1^ENSG00000151327.13 | chr14:35046505:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:4446:11846 | . | NO_LDAS | 0.0034 | GC | 1.5329 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr6--chr14]""]" | chr6:108166715-chr14:35046505 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NPR2--UXS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NPR2^ENSG00000159899.15 | chr9:35800845:+ | UXS1^ENSG00000115652.15 | chr2:106096741:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2290:48763:26530 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr9--chr2]""]" | chr9:35800845-chr2:106096741 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NPM1P35--EEF1A1P31 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NPM1P35^ENSG00000255213.1 | chr11:62331240:+ | EEF1A1P31^ENSG00000237859.2 | chrX:154909640:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2410:17382:15307 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chrX]""]" | chr11:62331240-chrX:154909640 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NPIPA2--SETD4 | 1 | 0 | 0.07 | 0.0 | ONLY_REF_SPLICE | NPIPA2^ENSG00000254852.8 | chr16:14748185:+ | SETD4^ENSG00000185917.14 | chr21:36057204:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1492:34525:14676 | . | YES_LDAS | 0.0002 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr21]""]" | chr16:14748185-chr21:36057204 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NPC2--PGP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NPC2^ENSG00000119655.11 | chr14:74493212:- | PGP^ENSG00000184207.9 | chr16:2214024:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:50988:22621 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr14--chr16]""]" | chr14:74493212-chr16:2214024 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NPAS3--RHOXF1P3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NPAS3^ENSG00000151322.20 | chr14:33800866:+ | RHOXF1P3^ENSG00000282933.2 | chrX:119943286:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:45624:27651 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr14--chrX]""]" | chr14:33800866-chrX:119943286 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NOXA1--GAMT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NOXA1^ENSG00000188747.8 | chr9:137426330:+ | GAMT^ENSG00000130005.13 | chr19:1397499:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:43206:28926 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr9--chr19]""]" | chr9:137426330-chr19:1397499 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NOL11--ABCA9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NOL11^ENSG00000130935.10 | chr17:67743586:+ | ABCA9^ENSG00000154258.17 | chr17:69051139:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2315:23725:10514 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr17:1.23Mb]""]" | chr17:67743586-chr17:69051139 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NLRP14--ZNF215 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NLRP14^ENSG00000158077.5 | chr11:7049838:+ | ZNF215^ENSG00000149054.16 | chr11:6955690:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2174:28708:9421 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[19475]""]" | chr11:7049838-chr11:6955690 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NKX3-1--SCAND2P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NKX3-1^ENSG00000167034.10 | chr8:23679802:- | SCAND2P^ENSG00000176700.20 | chr15:84646154:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1380:37729:16946 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr8--chr15]""]" | chr8:23679802-chr15:84646154 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NKD2--DPYS | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | NKD2^ENSG00000145506.14 | chr5:1009000:+ | DPYS^ENSG00000147647.13 | chr8:104466990:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:29194:2583 | . | NO_LDAS | 0.0011 | GC | 1.2729 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr5--chr8]""]" | chr5:1009000-chr8:104466990 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NHLRC2--LHX2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NHLRC2^ENSG00000196865.4 | chr10:113855004:+ | LHX2^ENSG00000106689.11 | chr9:124015276:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:49831:21290 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr9]""]" | chr10:113855004-chr9:124015276 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NHEJ1--CNPPD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NHEJ1^ENSG00000187736.13 | chr2:219157472:- | CNPPD1^ENSG00000115649.16 | chr2:219176847:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:40342:25479 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.4716 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr2:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[11032]""]" | chr2:219157472-chr2:219176847 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NGDN--THTPA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NGDN^ENSG00000129460.16 | chr14:23477560:+ | THTPA^ENSG00000259431.6 | chr14:23558695:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:27616:18936 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""NEIGHBORS[46126]""]" | chr14:23477560-chr14:23558695 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| NFKB1--TANC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NFKB1^ENSG00000109320.13 | chr4:102537956:+ | TANC1^ENSG00000115183.15 | chr2:159231741:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2324:42607:6395 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:102537956-chr2:159231741 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| NEPRO--C3orf52 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NEPRO^ENSG00000163608.15 | chr3:113019542:- | C3orf52^ENSG00000114529.13 | chr3:112102838:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1135:19203:27651 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr3:0.87Mb]""]" | chr3:113019542-chr3:112102838 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NEK8--ADCK2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEK8^ENSG00000160602.14 | chr17:28737993:+ | ADCK2^ENSG00000133597.11 | chr7:140673740:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:32333:10206 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr17--chr7]""]" | chr17:28737993-chr7:140673740 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NEK2--GTF2F2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NEK2^ENSG00000117650.13 | chr1:211667106:- | GTF2F2^ENSG00000188342.12 | chr13:45283442:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2225:23628:11103 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr13]""]" | chr1:211667106-chr13:45283442 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NEK2--ABCA13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEK2^ENSG00000117650.13 | chr1:211673682:- | ABCA13^ENSG00000179869.15 | chr7:48524412:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2404:5223:21794 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:211673682-chr7:48524412 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NEFM--CYP11A1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEFM^ENSG00000104722.14 | chr8:24918579:+ | CYP11A1^ENSG00000140459.18 | chr15:74361783:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2244:22714:1841 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr15]""]" | chr8:24918579-chr15:74361783 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NEBL--FGFR1OP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NEBL^ENSG00000078114.19 | chr10:20880794:- | FGFR1OP2^ENSG00000111790.14 | chr12:26963342:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1283:40091:17731 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr12]""]" | chr10:20880794-chr12:26963342 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFC2--KCTD14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NDUFC2^ENSG00000151366.13 | chr11:78079579:- | KCTD14^ENSG00000151364.17 | chr11:78038758:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1243:49791:19426 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[22106]""]" | chr11:78079579-chr11:78038758 | False | 0 | Excluded | annotation | pattern: | ConjoinG | FAIL | 1 | ||||||
| NDUFC2--KCTD14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NDUFC2^ENSG00000151366.13 | chr11:78072998:- | KCTD14^ENSG00000151364.17 | chr11:78038758:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1424:35779:6535 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[22106]""]" | chr11:78072998-chr11:78038758 | False | 0 | Excluded | annotation | pattern: | ConjoinG | FAIL | 1 | ||||||
| NDUFAF6--NPIPB10P | 1 | 0 | 0.06 | 0.0 | ONLY_REF_SPLICE | NDUFAF6^ENSG00000156170.13 | chr8:95044595:+ | NPIPB10P^ENSG00000196796.5 | chr16:29050502:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1308:25521:10963 | . | NO_LDAS | 0.0002 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr8--chr16]""]" | chr8:95044595-chr16:29050502 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFAB1--C16orf70 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NDUFAB1^ENSG00000004779.10 | chr16:23595429:- | C16orf70^ENSG00000125149.12 | chr16:67139984:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2426:30650:3144 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr16:43.51Mb]""]" | chr16:23595429-chr16:67139984 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFA6-DT--LINC01160 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NDUFA6-DT^ENSG00000237037.9 | chr22:42121735:+ | LINC01160^ENSG00000231346.5 | chr1:111608601:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:9664:5162 | . | YES_LDAS | 0.0017 | GT | 1.8323 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:42121735-chr1:111608601 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFA6-DT--AL359813.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NDUFA6-DT^ENSG00000237037.9 | chr22:42121735:+ | AL359813.1^ENSG00000287055.1 | chr6:43424978:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:9664:5162 | . | YES_LDAS | 0.0017 | GT | 1.8323 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr22--chr6]""]" | chr22:42121735-chr6:43424978 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFA5--IQUB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NDUFA5^ENSG00000128609.16 | chr7:123542103:- | IQUB^ENSG00000164675.11 | chr7:123512344:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:20198:7656 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[1920]""]" | chr7:123542103-chr7:123512344 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| NDUFA4--SLC39A10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NDUFA4^ENSG00000189043.10 | chr7:10940016:- | SLC39A10^ENSG00000196950.14 | chr2:195680032:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:31240:22383 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr7--chr2]""]" | chr7:10940016-chr2:195680032 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFA4--MGC4859 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NDUFA4^ENSG00000189043.10 | chr7:10938090:- | MGC4859^ENSG00000283117.1 | chr7:10561577:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2387:47768:15671 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7465 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.15Mb]""]" | chr7:10938090-chr7:10561577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDST2--CAMK2G | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NDST2^ENSG00000166507.19 | chr10:73805900:- | CAMK2G^ENSG00000148660.21 | chr10:73873083:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2406:2982:7936 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5058 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr10:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[703]""]" | chr10:73805900-chr10:73873083 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NCAPG2--AC073636.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NCAPG2^ENSG00000146918.20 | chr7:158689856:- | AC073636.1^ENSG00000227098.2 | chr2:176846342:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2122:28644:7460 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr2]""]" | chr7:158689856-chr2:176846342 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NCAPG2--AC002066.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NCAPG2^ENSG00000146918.20 | chr7:158671514:- | AC002066.1^ENSG00000237813.4 | chr7:116243936:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:9826:14242 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr7:42.13Mb]""]" | chr7:158671514-chr7:116243936 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NCAPD3--ALDOA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NCAPD3^ENSG00000151503.13 | chr11:134192689:- | ALDOA^ENSG00000149925.22 | chr16:30065788:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1361:11477:14634 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr11--chr16]""]" | chr11:134192689-chr16:30065788 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NBR2--DHX29 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NBR2^ENSG00000198496.12 | chr17:43125770:+ | DHX29^ENSG00000067248.10 | chr5:55281515:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2113:1874:6269 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr5]""]" | chr17:43125770-chr5:55281515 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NBPF3--AC239859.1 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | NBPF3^ENSG00000142794.19 | chr1:21479400:+ | AC239859.1^ENSG00000203825.4 | chr1:143544151:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1394:26419:12070 | . | NO_LDAS | 0.0011 | GT | 1.8062 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr1:122.06Mb]""]" | chr1:21479400-chr1:143544151 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NBN--ZDHHC13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NBN^ENSG00000104320.14 | chr8:89982722:- | ZDHHC13^ENSG00000177054.14 | chr11:19164301:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1314:18547:27469 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.585 | "[""INTERCHROMOSOMAL[chr8--chr11]""]" | chr8:89982722-chr11:19164301 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NBEAP2--C2orf27A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NBEAP2^ENSG00000197927.13 | chr2:131750830:+ | C2orf27A^ENSG00000287151.1 | chr2:131684709:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1360:11784:3816 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[628]""]" | chr2:131750830-chr2:131684709 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NARS2--GAB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NARS2^ENSG00000137513.10 | chr11:78441091:- | GAB2^ENSG00000033327.13 | chr11:78280901:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1334:7383:23546 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8256 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[17620]""]" | chr11:78441091-chr11:78280901 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| NAPSA--AC008655.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NAPSA^ENSG00000131400.8 | chr19:50365539:- | AC008655.2^ENSG00000269392.1 | chr19:50366017:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2376:27268:2892 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[50]""]" | chr19:50365539-chr19:50366017 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NAP1L4--RMND1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NAP1L4^ENSG00000205531.13 | chr11:2976024:- | RMND1^ENSG00000155906.19 | chr6:151433230:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2114:9834:10949 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:2976024-chr6:151433230 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NAA40--COX8A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NAA40^ENSG00000110583.13 | chr11:63954450:+ | COX8A^ENSG00000176340.4 | chr11:63976225:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2406:25351:10332 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[17301]""]" | chr11:63954450-chr11:63976225 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| MYL6P5--DEDD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MYL6P5^ENSG00000228118.3 | chr17:71621047:+ | DEDD^ENSG00000158796.17 | chr1:161130847:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1171:6987:29109 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:71621047-chr1:161130847 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MYL5--MED23 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | MYL5^ENSG00000215375.6 | chr4:680018:+ | MED23^ENSG00000112282.18 | chr6:131628173:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1296:37866:10879 | . | NO_LDAS | 0.0017 | GT | 1.6402 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:680018-chr6:131628173 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MYH11--AL080243.1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | MYH11^ENSG00000133392.18 | chr16:15757893:- | AL080243.1^ENSG00000237214.3 | chr22:41064387:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2492:13637:12602 | . | YES_LDAS | 0.0008 | AT | 1.7819 | AC | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr22]""]" | chr16:15757893-chr22:41064387 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MYB--FAM83B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MYB^ENSG00000118513.19 | chr6:135181536:+ | FAM83B^ENSG00000168143.9 | chr6:54870187:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1133:15950:17899 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr6:80.24Mb]""]" | chr6:135181536-chr6:54870187 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MUTYH--TESK2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MUTYH^ENSG00000132781.19 | chr1:45340219:- | TESK2^ENSG00000070759.17 | chr1:45355449:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1112:24065:18866 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[2990]""]" | chr1:45340219-chr1:45355449 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MUTYH--SRD5A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MUTYH^ENSG00000132781.19 | chr1:45334391:- | SRD5A1^ENSG00000145545.12 | chr5:6656078:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1425:25950:20645 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:45334391-chr5:6656078 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MTX2--LNPK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MTX2^ENSG00000128654.14 | chr2:176269669:+ | LNPK^ENSG00000144320.14 | chr2:175979868:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1411:25820:21430 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr2:0.27Mb]""]" | chr2:176269669-chr2:175979868 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MTURN--ZNRF2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MTURN^ENSG00000180354.16 | chr7:30135298:+ | ZNRF2^ENSG00000180233.11 | chr7:30323642:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2128:22544:25816 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.12Mb]""]" | chr7:30135298-chr7:30323642 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| MTPAP--PLAA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MTPAP^ENSG00000107951.15 | chr10:30315963:- | PLAA^ENSG00000137055.15 | chr9:26935206:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1495:19308:17240 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr9]""]" | chr10:30315963-chr9:26935206 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MTND6P22--KCTD9 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | MTND6P22^ENSG00000270230.1 | chr5:100046781:+ | KCTD9^ENSG00000104756.16 | chr8:25446250:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:50511:27231 | . | NO_LDAS | 0.0011 | GT | 1.5219 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chr8]""]" | chr5:100046781-chr8:25446250 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MTMR14--LINC02280 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MTMR14^ENSG00000163719.20 | chr3:9688711:+ | LINC02280^ENSG00000260792.1 | chr14:104661909:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2217:18086:13555 | . | NO_LDAS | 0.0034 | GC | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr3--chr14]""]" | chr3:9688711-chr14:104661909 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MTMR10--AAGAB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MTMR10^ENSG00000166912.17 | chr15:30990777:- | AAGAB^ENSG00000103591.13 | chr15:67236820:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1267:28231:14256 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:36.21Mb]""]" | chr15:30990777-chr15:67236820 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MTHFSD--LMF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MTHFSD^ENSG00000103248.19 | chr16:86546559:- | LMF1^ENSG00000103227.19 | chr16:931793:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1244:27705:6395 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr16:85.55Mb]""]" | chr16:86546559-chr16:931793 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MTHFSD--DPYS | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MTHFSD^ENSG00000103248.19 | chr16:86552033:- | DPYS^ENSG00000147647.13 | chr8:104429397:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1213:46134:2387 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr16--chr8]""]" | chr16:86552033-chr8:104429397 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MTHFS--AC015871.7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MTHFS^ENSG00000136371.11 | chr15:79845249:- | AC015871.7^ENSG00000288592.1 | chr15:79899125:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1481:12116:6605 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1652]""]" | chr15:79845249-chr15:79899125 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MTERF4--GPR89A | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | MTERF4^ENSG00000122085.17 | chr2:241097243:- | GPR89A^ENSG00000117262.19 | chr1:145663329:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1433:1914:2135 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:241097243-chr1:145663329 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MT-TA--CHRD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MT-TA^ENSG00000210127.1 | chrM:5607:- | CHRD^ENSG00000090539.15 | chr3:184381331:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:52096:9772 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chrM--chr3]""]" | chrM:5607-chr3:184381331 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MSH3--TENT2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MSH3^ENSG00000113318.11 | chr5:80813741:+ | TENT2^ENSG00000164329.13 | chr5:79619612:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1277:48796:18403 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr5:0.97Mb]""]" | chr5:80813741-chr5:79619612 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRTO4--MUTYH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MRTO4^ENSG00000053372.5 | chr1:19251863:+ | MUTYH^ENSG00000132781.19 | chr1:45334511:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:15004:17184 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:26.07Mb]""]" | chr1:19251863-chr1:45334511 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRRF--TMEM135 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MRRF^ENSG00000148187.18 | chr9:122285287:+ | TMEM135^ENSG00000166575.17 | chr11:87318137:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1332:36709:10640 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:122285287-chr11:87318137 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS7--GNG10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRPS7^ENSG00000125445.11 | chr17:75263507:+ | GNG10^ENSG00000242616.4 | chr9:111669272:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:22495:23686 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr9]""]" | chr17:75263507-chr9:111669272 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS6--MAPK8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MRPS6^ENSG00000243927.6 | chr21:34073745:+ | MAPK8^ENSG00000107643.16 | chr10:48424514:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:36693:16638 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr21--chr10]""]" | chr21:34073745-chr10:48424514 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS35--KATNBL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MRPS35^ENSG00000061794.13 | chr12:27710955:+ | KATNBL1^ENSG00000134152.11 | chr15:34163690:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2231:23943:13751 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr15]""]" | chr12:27710955-chr15:34163690 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS31--UCHL3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MRPS31^ENSG00000102738.8 | chr13:40756873:- | UCHL3^ENSG00000118939.18 | chr13:75560753:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2481:5150:14970 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.4295 | "[""INTRACHROMOSOMAL[chr13:34.78Mb]""]" | chr13:40756873-chr13:75560753 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS28--AC036214.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MRPS28^ENSG00000147586.10 | chr8:80002999:- | AC036214.1^ENSG00000249328.3 | chr8:79830581:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1219:7569:28632 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9329 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[46958]""]" | chr8:80002999-chr8:79830581 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS22--RPL5P27 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRPS22^ENSG00000175110.13 | chr3:139355790:+ | RPL5P27^ENSG00000228195.2 | chr10:116751246:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2112:12836:3088 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:139355790-chr10:116751246 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MRPS18A--NIM1K | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRPS18A^ENSG00000096080.12 | chr6:43687668:- | NIM1K^ENSG00000177453.7 | chr5:43277180:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2448:32147:21570 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr5]""]" | chr6:43687668-chr5:43277180 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MRPL49--MRPL49P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRPL49^ENSG00000149792.9 | chr11:65124652:+ | MRPL49P1^ENSG00000224296.3 | chr5:64675030:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:17471:16385 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chr5]""]" | chr11:65124652-chr5:64675030 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPL24--HYKK | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRPL24^ENSG00000143314.12 | chr1:156737458:- | HYKK^ENSG00000188266.14 | chr15:78527382:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2494:29121:17170 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:156737458-chr15:78527382 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MRPL19--TLE4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRPL19^ENSG00000115364.14 | chr2:75652216:+ | TLE4^ENSG00000106829.20 | chr9:79704805:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1424:45819:26839 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:75652216-chr9:79704805 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MRPL17--TPRXL | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | MRPL17^ENSG00000158042.9 | chr11:6682195:- | TPRXL^ENSG00000180438.15 | chr3:14064094:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1316:45988:18137 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:6682195-chr3:14064094 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MROH7--TMEM91 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MROH7^ENSG00000184313.20 | chr1:54674151:+ | TMEM91^ENSG00000142046.15 | chr19:41378281:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1248:50001:5050 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:54674151-chr19:41378281 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRM1--HAUS7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRM1^ENSG00000278619.5 | chr17:36602176:+ | HAUS7^ENSG00000213397.11 | chrX:153462621:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2471:36467:25718 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr17--chrX]""]" | chr17:36602176-chrX:153462621 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MPV17--PHKG1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MPV17^ENSG00000115204.15 | chr2:27322448:- | PHKG1^ENSG00000164776.10 | chr7:56088975:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1339:12787:9057 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:27322448-chr7:56088975 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MPP6--MFAP3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MPP6^ENSG00000105926.16 | chr7:24625736:+ | MFAP3^ENSG00000037749.13 | chr5:154121718:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2249:12714:24344 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:24625736-chr5:154121718 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MPHOSPH9--RGS10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MPHOSPH9^ENSG00000051825.15 | chr12:123210056:- | RGS10^ENSG00000148908.15 | chr10:119500259:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2191:34274:2639 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr10]""]" | chr12:123210056-chr10:119500259 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MORN4--ZBTB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MORN4^ENSG00000171160.18 | chr10:97616231:- | ZBTB1^ENSG00000126804.13 | chr14:64516600:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1215:11962:20407 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr10--chr14]""]" | chr10:97616231-chr14:64516600 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MORN1--ODF2L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MORN1^ENSG00000116151.14 | chr1:2372481:- | ODF2L^ENSG00000122417.15 | chr1:86348878:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:5142:26951 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr1:83.96Mb]""]" | chr1:2372481-chr1:86348878 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MOB4--AC019080.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MOB4^ENSG00000115540.15 | chr2:197516146:+ | AC019080.1^ENSG00000213963.6 | chr2:177311328:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:39711:23994 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr2:20.12Mb]""]" | chr2:197516146-chr2:177311328 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MNAT1--SMAP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MNAT1^ENSG00000020426.11 | chr14:60798160:+ | SMAP1^ENSG00000112305.15 | chr6:70836941:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:48618:4027 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr14--chr6]""]" | chr14:60798160-chr6:70836941 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MNAT1--SLC38A6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MNAT1^ENSG00000020426.11 | chr14:60818847:+ | SLC38A6^ENSG00000139974.16 | chr14:60982508:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2495:48723:4517 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8892 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""NEIGHBORS[11149]""]" | chr14:60818847-chr14:60982508 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| MNAT1--GPHN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MNAT1^ENSG00000020426.11 | chr14:60879835:+ | GPHN^ENSG00000171723.16 | chr14:67159415:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1368:47145:15293 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr14:5.54Mb]""]" | chr14:60879835-chr14:67159415 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MNAT1--C22orf34 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MNAT1^ENSG00000020426.11 | chr14:60818847:+ | C22orf34^ENSG00000188511.12 | chr22:49441212:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2453:37300:12952 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr14--chr22]""]" | chr14:60818847-chr22:49441212 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MLX--GPR34 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MLX^ENSG00000108788.12 | chr17:42568506:+ | GPR34^ENSG00000171659.15 | chrX:41688967:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2398:45713:2527 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr17--chrX]""]" | chr17:42568506-chrX:41688967 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MLLT3--FAM20C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MLLT3^ENSG00000171843.17 | chr9:20622297:- | FAM20C^ENSG00000177706.9 | chr7:255926:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2489:31936:5008 | . | NO_LDAS | 0.0034 | GT | 0.9056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr7]""]" | chr9:20622297-chr7:255926 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MIS12--RABEP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIS12^ENSG00000167842.16 | chr17:5486684:+ | RABEP1^ENSG00000029725.17 | chr17:5346790:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:26605:21164 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr17:0.10Mb]"",""LOCAL_REARRANGEMENT:+:[99945]""]" | chr17:5486684-chr17:5346790 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIR937--NRBP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR937^ENSG00000284224.1 | chr8:143813030:- | NRBP2^ENSG00000185189.18 | chr8:143839056:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2463:15408:4125 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr8:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[20541]""]" | chr8:143813030-chr8:143839056 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MIR4660--CLCN2 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | MIR4660^ENSG00000263407.1 | chr8:9048511:+ | CLCN2^ENSG00000114859.16 | chr3:184355460:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:44702:10921 | . | NO_LDAS | 0.0011 | GT | 1.6402 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chr3]""]" | chr8:9048511-chr3:184355460 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MIR4435-2HG--PHF23 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIR4435-2HG^ENSG00000172965.17 | chr2:111494885:- | PHF23^ENSG00000040633.13 | chr17:7237660:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1347:42380:8721 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:111494885-chr17:7237660 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIR4435-2HG--HMGN5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIR4435-2HG^ENSG00000172965.17 | chr2:111494885:- | HMGN5^ENSG00000198157.11 | chrX:81118485:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1381:50818:2794 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chrX]""]" | chr2:111494885-chrX:81118485 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIR3605--TPTEP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR3605^ENSG00000284154.1 | chr1:33331376:- | TPTEP2^ENSG00000244627.5 | chr22:38381968:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:47170:16596 | . | NO_LDAS | 0.0034 | GC | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr22]""]" | chr1:33331376-chr22:38381968 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MIR222HG--METTL14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIR222HG^ENSG00000270069.1 | chrX:45769786:- | METTL14^ENSG00000145388.15 | chr4:118694436:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2471:28004:19748 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrX--chr4]""]" | chrX:45769786-chr4:118694436 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIR222HG--CDK19 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIR222HG^ENSG00000270069.1 | chrX:45769786:- | CDK19^ENSG00000155111.15 | chr6:110746201:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:12455:25129 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chrX--chr6]""]" | chrX:45769786-chr6:110746201 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIR2052HG--GDAP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR2052HG^ENSG00000254349.6 | chr8:74702456:+ | GDAP1^ENSG00000104381.14 | chr8:74360303:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1391:12431:10907 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr8:0.08Mb]"",""LOCAL_REARRANGEMENT:+:[81768]""]" | chr8:74702456-chr8:74360303 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MIR181A1HG--PTK2B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR181A1HG^ENSG00000229989.4 | chr1:198899190:- | PTK2B^ENSG00000120899.18 | chr8:27444241:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:28611:3873 | . | YES_LDAS | 0.0034 | AT | 1.8256 | AC | 1.7232 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:198899190-chr8:27444241 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIGA2--ATP5F1C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIGA2^ENSG00000148343.18 | chr9:129059271:+ | ATP5F1C^ENSG00000165629.20 | chr10:7797047:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:44815:4979 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr10]""]" | chr9:129059271-chr10:7797047 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MICOS10--MOB4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MICOS10^ENSG00000173436.15 | chr1:19597109:+ | MOB4^ENSG00000115540.15 | chr2:197535530:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2174:48472:9267 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:19597109-chr2:197535530 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MGST1--AC007529.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MGST1^ENSG00000008394.13 | chr12:16383604:+ | AC007529.2^ENSG00000283240.1 | chr12:16661766:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1222:13895:21234 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6895 | "[""BodyMap"",""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr12:0.05Mb]"",""NEIGHBORS[52507]""]" | chr12:16383604-chr12:16661766 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| MFSD14B--FRA10AC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MFSD14B^ENSG00000148110.16 | chr9:94441099:+ | FRA10AC1^ENSG00000148690.12 | chr10:93700106:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1266:18798:12434 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr10]""]" | chr9:94441099-chr10:93700106 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MFSD14A--MRC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MFSD14A^ENSG00000156875.14 | chr1:100050004:+ | MRC1^ENSG00000260314.3 | chr10:17871982:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:38117:26138 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:100050004-chr10:17871982 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MFSD1--IQCJ | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MFSD1^ENSG00000118855.21 | chr3:158827337:+ | IQCJ^ENSG00000214216.11 | chr3:159245843:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:28878:8398 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.4716 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.13Mb]""]" | chr3:158827337-chr3:159245843 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| MFGE8--CEPT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MFGE8^ENSG00000140545.15 | chr15:88905757:- | CEPT1^ENSG00000134255.14 | chr1:111147642:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:18822:22873 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:88905757-chr1:111147642 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MFAP3--IL1RAPL2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MFAP3^ENSG00000037749.13 | chr5:154053312:+ | IL1RAPL2^ENSG00000189108.13 | chrX:105717453:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2413:12083:3326 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chrX]""]" | chr5:154053312-chrX:105717453 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| METTL27--LINC01348 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | METTL27^ENSG00000165171.11 | chr7:73840031:- | LINC01348^ENSG00000280587.1 | chr1:235065586:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2135:3977:15180 | . | YES_LDAS | 0.0017 | GT | 1.9086 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:73840031-chr1:235065586 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| METTL27--ISG20 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | METTL27^ENSG00000165171.11 | chr7:73840031:- | ISG20^ENSG00000172183.16 | chr15:88646956:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:11800:20659 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr7--chr15]""]" | chr7:73840031-chr15:88646956 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| METTL27--ANGPT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | METTL27^ENSG00000165171.11 | chr7:73842018:- | ANGPT2^ENSG00000091879.14 | chr8:6508337:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:20351:21486 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:73842018-chr8:6508337 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MESD--TBX5-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MESD^ENSG00000117899.11 | chr15:80948780:- | TBX5-AS1^ENSG00000255399.4 | chr12:114412446:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:6234:28002 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr12]""]" | chr15:80948780-chr12:114412446 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MERTK--EEF1E1P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MERTK^ENSG00000153208.17 | chr2:111929540:+ | EEF1E1P1^ENSG00000236307.2 | chr2:111887898:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2347:5361:17492 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9866]""]" | chr2:111929540-chr2:111887898 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MEMO1--SPAST | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MEMO1^ENSG00000162959.14 | chr2:32010187:- | SPAST^ENSG00000021574.13 | chr2:32114638:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2108:22236:15251 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr2:0.05Mb]"",""LOCAL_INVERSION:-:+:[52326]""]" | chr2:32010187-chr2:32114638 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MEIOSIN--AP004550.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MEIOSIN^ENSG00000237452.3 | chr19:45762129:+ | AP004550.1^ENSG00000254573.1 | chr11:134572906:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2134:13580:20911 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:45762129-chr11:134572906 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MEF2C--FBXW11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MEF2C^ENSG00000081189.16 | chr5:88804598:- | FBXW11^ENSG00000072803.18 | chr5:171910797:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1486:35205:24008 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr5:82.96Mb]""]" | chr5:88804598-chr5:171910797 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MED31--SUPT3H | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MED31^ENSG00000108590.11 | chr17:6650356:- | SUPT3H^ENSG00000196284.17 | chr6:45322967:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2348:24793:26376 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr17--chr6]""]" | chr17:6650356-chr6:45322967 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MED27--RALGPS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MED27^ENSG00000160563.14 | chr9:132077442:- | RALGPS1^ENSG00000136828.19 | chr9:127034431:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2467:9478:7390 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr9:4.63Mb]""]" | chr9:132077442-chr9:127034431 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MED27--DNAJC25 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MED27^ENSG00000160563.14 | chr9:131939381:- | DNAJC25^ENSG00000059769.20 | chr9:111642857:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1133:25068:24835 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr9:20.20Mb]""]" | chr9:131939381-chr9:111642857 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MED14--OFD1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | MED14^ENSG00000180182.11 | chrX:40726746:- | OFD1^ENSG00000046651.15 | chrX:13749427:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:3095:4517 | . | YES_LDAS | 0.0017 | GT | 1.7819 | AG | 1.4256 | "[""INTRACHROMOSOMAL[chrX:26.88Mb]""]" | chrX:40726746-chrX:13749427 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MED12L--SEC62 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MED12L^ENSG00000144893.12 | chr3:151190931:+ | SEC62^ENSG00000008952.17 | chr3:169975608:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:20643:13891 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr3:18.53Mb]""]" | chr3:151190931-chr3:169975608 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MED10--EPB41L4A-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MED10^ENSG00000133398.4 | chr5:6372413:- | EPB41L4A-AS1^ENSG00000224032.7 | chr5:112161249:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1363:20545:20281 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr5:105.78Mb]""]" | chr5:6372413-chr5:112161249 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MECR--C8orf44 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MECR^ENSG00000116353.16 | chr1:29216005:- | C8orf44^ENSG00000288596.2 | chr8:66679721:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1460:32972:19889 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:29216005-chr8:66679721 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MEAF6--WFIKKN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MEAF6^ENSG00000163875.16 | chr1:37494088:- | WFIKKN1^ENSG00000127578.7 | chr16:633116:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1209:26864:9590 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:37494088-chr16:633116 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ME1--SNAP91 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ME1^ENSG00000065833.9 | chr6:83346173:- | SNAP91^ENSG00000065609.14 | chr6:83560947:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:35431:2934 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9899 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.12Mb]""]" | chr6:83346173-chr6:83560947 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ME1--IL17RC | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ME1^ENSG00000065833.9 | chr6:83239539:- | IL17RC^ENSG00000163702.20 | chr3:9920518:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2424:33643:14522 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr3]""]" | chr6:83239539-chr3:9920518 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MDFIC--WLS | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MDFIC^ENSG00000135272.12 | chr7:114923127:+ | WLS^ENSG00000116729.14 | chr1:68159247:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2355:13701:21542 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:114923127-chr1:68159247 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MCUB--C5orf64 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MCUB^ENSG00000005059.16 | chr4:109560436:+ | C5orf64^ENSG00000178722.13 | chr5:61757477:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2480:36289:8427 | . | NO_LDAS | 0.0034 | GT | 1.3753 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr4--chr5]""]" | chr4:109560436-chr5:61757477 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MCU--SIL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MCU^ENSG00000156026.14 | chr10:72692301:+ | SIL1^ENSG00000120725.13 | chr5:139051046:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1285:12399:17492 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr5]""]" | chr10:72692301-chr5:139051046 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MCPH1--RPS10P7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MCPH1^ENSG00000147316.13 | chr8:6414883:+ | RPS10P7^ENSG00000223396.4 | chr1:201530094:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:37049:5876 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr8--chr1]""]" | chr8:6414883-chr1:201530094 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MCMDC2--SGK3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MCMDC2^ENSG00000178460.18 | chr8:66874586:+ | SGK3^ENSG00000104205.16 | chr8:66841024:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:3168:8483 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8727]""]" | chr8:66874586-chr8:66841024 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MCM9--CEP85L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MCM9^ENSG00000111877.18 | chr6:118826782:- | CEP85L^ENSG00000111860.14 | chr6:118632611:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:19680:10374 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr6:0.10Mb]""]" | chr6:118826782-chr6:118632611 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MCM9--CEP85L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MCM9^ENSG00000111877.18 | chr6:118826147:- | CEP85L^ENSG00000111860.14 | chr6:118664521:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:29372:2415 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr6:0.10Mb]""]" | chr6:118826147-chr6:118664521 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| MCM9--CEP85L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MCM9^ENSG00000111877.18 | chr6:118826147:- | CEP85L^ENSG00000111860.14 | chr6:118652808:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:6081:22103 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr6:0.10Mb]""]" | chr6:118826147-chr6:118652808 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| MCM9--CEP85L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MCM9^ENSG00000111877.18 | chr6:118826147:- | CEP85L^ENSG00000111860.14 | chr6:118632611:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1170:11663:15433 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr6:0.10Mb]""]" | chr6:118826147-chr6:118632611 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| MCF2L2--PARP9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MCF2L2^ENSG00000053524.12 | chr3:183298504:- | PARP9^ENSG00000138496.16 | chr3:122552612:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1151:9664:20519 | . | NO_LDAS | 0.0034 | AT | 1.5628 | AC | 1.8062 | "[""INTRACHROMOSOMAL[chr3:60.61Mb]""]" | chr3:183298504-chr3:122552612 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MBTPS2--GK5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MBTPS2^ENSG00000012174.12 | chrX:21853503:+ | GK5^ENSG00000175066.16 | chr3:142213601:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:42380:1126 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chrX--chr3]""]" | chrX:21853503-chr3:142213601 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MARK1--AL390957.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MARK1^ENSG00000116141.17 | chr1:220528873:+ | AL390957.1^ENSG00000285280.2 | chr1:192957422:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1289:30884:22803 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr1:27.57Mb]""]" | chr1:220528873-chr1:192957422 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MARCHF9--LINC00562 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MARCHF9^ENSG00000139266.6 | chr12:57757084:+ | LINC00562^ENSG00000260388.2 | chr13:47930590:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2301:49257:20435 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr12--chr13]""]" | chr12:57757084-chr13:47930590 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MARCHF3--C5orf63 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MARCHF3^ENSG00000173926.6 | chr5:126914930:- | C5orf63^ENSG00000164241.13 | chr5:127047915:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:43861:3242 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr5:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[12000]""]" | chr5:126914930-chr5:127047915 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MAPK8--PARG | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | MAPK8^ENSG00000107643.16 | chr10:48306821:+ | PARG^ENSG00000227345.9 | chr10:49922419:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1108:38368:8749 | . | YES_LDAS | 0.0017 | GT | 1.5219 | AG | 1.9086 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr10:1.38Mb]""]" | chr10:48306821-chr10:49922419 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MAP4K5--RSPH4A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP4K5^ENSG00000012983.11 | chr14:50440013:- | RSPH4A^ENSG00000111834.13 | chr6:116617060:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2435:31604:23518 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr6]""]" | chr14:50440013-chr6:116617060 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MAP4K5--PSMG4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP4K5^ENSG00000012983.11 | chr14:50440013:- | PSMG4^ENSG00000180822.12 | chr6:3291447:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2393:48585:21710 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr14--chr6]""]" | chr14:50440013-chr6:3291447 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MAP3K7--RNGTT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MAP3K7^ENSG00000135341.18 | chr6:90586764:- | RNGTT^ENSG00000111880.16 | chr6:88853764:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2139:25990:17969 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr6:1.55Mb]""]" | chr6:90586764-chr6:88853764 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MAP3K7--OSBPL11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP3K7^ENSG00000135341.18 | chr6:90561622:- | OSBPL11^ENSG00000144909.8 | chr3:125530121:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1190:40884:15825 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.1033 | "[""INTERCHROMOSOMAL[chr6--chr3]""]" | chr6:90561622-chr3:125530121 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MAP3K12--FAM155A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP3K12^ENSG00000139625.13 | chr12:53483937:- | FAM155A^ENSG00000204442.4 | chr13:107867136:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:8572:5820 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr12--chr13]""]" | chr12:53483937-chr13:107867136 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MAP2K5--SKOR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP2K5^ENSG00000137764.20 | chr15:67806981:+ | SKOR1^ENSG00000188779.12 | chr15:67825936:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:50907:29571 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.6729 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr15:0.01Mb]"",""NEIGHBORS[12587]""]" | chr15:67806981-chr15:67825936 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| MANBAL--TXLNG | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MANBAL^ENSG00000101363.12 | chr20:37301413:+ | TXLNG^ENSG00000086712.13 | chrX:16818574:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1469:35698:20183 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr20--chrX]""]" | chr20:37301413-chrX:16818574 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MAMSTR--MKKS | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MAMSTR^ENSG00000176909.12 | chr19:48713860:- | MKKS^ENSG00000125863.20 | chr20:10428816:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2118:12569:4755 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr19--chr20]""]" | chr19:48713860-chr20:10428816 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MAD2L1BP--PTPRA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MAD2L1BP^ENSG00000124688.14 | chr6:43633315:+ | PTPRA^ENSG00000132670.20 | chr20:2964272:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1257:44379:20813 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr20]""]" | chr6:43633315-chr20:2964272 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MACROH2A2--SAR1A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MACROH2A2^ENSG00000099284.15 | chr10:70075830:+ | SAR1A^ENSG00000079332.15 | chr10:70161069:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2315:40779:17829 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr10:0.04Mb]"",""LOCAL_INVERSION:+:-:[35007]""]" | chr10:70075830-chr10:70161069 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MACROD2--AC066613.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MACROD2^ENSG00000172264.17 | chr20:14002404:+ | AC066613.1^ENSG00000259668.6 | chr15:51458720:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1458:27851:16568 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr20--chr15]""]" | chr20:14002404-chr15:51458720 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LZIC--SLIT3-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LZIC^ENSG00000162441.12 | chr1:9932858:- | SLIT3-AS1^ENSG00000248222.5 | chr5:169026433:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:49491:16301 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:9932858-chr5:169026433 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LYRM7--CDC42SE2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LYRM7^ENSG00000186687.16 | chr5:131171038:+ | CDC42SE2^ENSG00000158985.14 | chr5:131315976:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:46547:14676 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9329 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[40065]""]" | chr5:131171038-chr5:131315976 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LYRM2--CYB5R4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LYRM2^ENSG00000083099.11 | chr6:89637674:- | CYB5R4^ENSG00000065615.14 | chr6:83963596:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:19194:1883 | . | NO_LDAS | 0.0034 | GT | 0.8366 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr6:5.60Mb]""]" | chr6:89637674-chr6:83963596 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LYPLA2--H3-2 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | LYPLA2^ENSG00000011009.11 | chr1:23794530:+ | H3-2^ENSG00000273213.3 | chr1:143905936:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2483:10959:29403 | . | YES_LDAS | 0.0007 | GT | 1.8892 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:120.10Mb]""]" | chr1:23794530-chr1:143905936 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LYPLA1--STAU2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LYPLA1^ENSG00000120992.18 | chr8:54100908:- | STAU2^ENSG00000040341.18 | chr8:73422702:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2445:40795:2555 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr8:19.32Mb]""]" | chr8:54100908-chr8:73422702 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LYPLA1--RGS20 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LYPLA1^ENSG00000120992.18 | chr8:54062254:- | RGS20^ENSG00000147509.14 | chr8:53913497:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1112:23854:1799 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr8:0.09Mb]"",""LOCAL_INVERSION:-:+:[87064]""]" | chr8:54062254-chr8:53913497 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LYPLA1--CHMP4C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LYPLA1^ENSG00000120992.18 | chr8:54100908:- | CHMP4C^ENSG00000164695.5 | chr8:81758142:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1124:40576:24709 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr8:27.63Mb]""]" | chr8:54100908-chr8:81758142 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LYAR--AK9 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | LYAR^ENSG00000145220.14 | chr4:4274421:- | AK9^ENSG00000155085.15 | chr6:109659256:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:11064:9323 | . | YES_LDAS | 0.0007 | GT | 1.585 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:4274421-chr6:109659256 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LUCAT1--SNRK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LUCAT1^ENSG00000248323.7 | chr5:91207633:- | SNRK^ENSG00000163788.14 | chr3:43332169:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2410:27131:18768 | . | YES_LDAS | 0.0034 | GT | 1.2729 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chr3]""]" | chr5:91207633-chr3:43332169 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LSM7--KPTN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LSM7^ENSG00000130332.15 | chr19:2328387:- | KPTN^ENSG00000118162.14 | chr19:47475544:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2471:24202:14031 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr19:45.15Mb]""]" | chr19:2328387-chr19:47475544 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LSM5--HDGFL3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LSM5^ENSG00000106355.10 | chr7:32488628:- | HDGFL3^ENSG00000166503.9 | chr15:83132831:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1179:2642:14101 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr7--chr15]""]" | chr7:32488628-chr15:83132831 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LRRC75B--SAR1A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRRC75B^ENSG00000178026.13 | chr22:24588214:- | SAR1A^ENSG00000079332.15 | chr10:70152592:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:48804:20183 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr22--chr10]""]" | chr22:24588214-chr10:70152592 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRRC75B--FPR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRRC75B^ENSG00000178026.13 | chr22:24588214:- | FPR2^ENSG00000171049.9 | chr19:51762417:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:16848:25760 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr22--chr19]""]" | chr22:24588214-chr19:51762417 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRRC45--TGM6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRRC45^ENSG00000169683.8 | chr17:82024763:+ | TGM6^ENSG00000166948.10 | chr20:2394561:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2297:41401:22411 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr20]""]" | chr17:82024763-chr20:2394561 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LRRC37B--AC006441.5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRRC37B^ENSG00000185158.12 | chr17:32018004:+ | AC006441.5^ENSG00000277426.1 | chr17:39026691:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1331:41037:26264 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr17:6.97Mb]""]" | chr17:32018004-chr17:39026691 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LRRC37A9P--RDM1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRRC37A9P^ENSG00000271013.1 | chr17:35917512:- | RDM1^ENSG00000278023.7 | chr17:35930255:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:3880:28912 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[56]""]" | chr17:35917512-chr17:35930255 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRRC37A--PI4KB | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | LRRC37A^ENSG00000176681.14 | chr17:46331716:+ | PI4KB^ENSG00000143393.16 | chr1:151298872:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1150:1251:23798 | . | NO_LDAS | 0.0011 | GC | 1.8323 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:46331716-chr1:151298872 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LRRC37A--NSF | 1 | 0 | 0.1 | 0.0 | ONLY_REF_SPLICE | LRRC37A^ENSG00000176681.14 | chr17:46302709:+ | NSF^ENSG00000073969.18 | chr17:46692903:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1493:1413:8441 | . | YES_LDAS | 0.0003 | GT | 1.7819 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr17:0.25Mb]""]" | chr17:46302709-chr17:46692903 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRRC23--INTU | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | LRRC23^ENSG00000010626.15 | chr12:6907445:+ | INTU^ENSG00000164066.13 | chr4:127632959:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:39565:7067 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:6907445-chr4:127632959 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LRRC10B--ZCCHC3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRRC10B^ENSG00000204950.4 | chr11:61508816:+ | ZCCHC3^ENSG00000247315.4 | chr20:298046:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2483:21832:11243 | . | NO_LDAS | 0.0034 | GT | 0.971 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr11--chr20]""]" | chr11:61508816-chr20:298046 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LRRC1--FAM83B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRRC1^ENSG00000137269.15 | chr6:53795415:+ | FAM83B^ENSG00000168143.9 | chr6:54870187:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2277:38206:12952 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr6:0.92Mb]""]" | chr6:53795415-chr6:54870187 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRR1--BRCA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRR1^ENSG00000165501.17 | chr14:49602468:+ | BRCA1^ENSG00000012048.23 | chr17:43045802:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:26734:17605 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr17]""]" | chr14:49602468-chr17:43045802 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRMDA--TMEM254 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRMDA^ENSG00000148655.15 | chr10:75438494:+ | TMEM254^ENSG00000133678.14 | chr10:80081841:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2341:30407:7404 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4295 | "[""INTRACHROMOSOMAL[chr10:3.52Mb]""]" | chr10:75438494-chr10:80081841 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRMDA--PSMG3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRMDA^ENSG00000148655.15 | chr10:76058783:+ | PSMG3^ENSG00000157778.9 | chr7:1569360:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1167:51328:24415 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:76058783-chr7:1569360 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRCH1--SPRY2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRCH1^ENSG00000136141.15 | chr13:46553703:+ | SPRY2^ENSG00000136158.12 | chr13:80337756:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:33053:11341 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr13:33.58Mb]""]" | chr13:46553703-chr13:80337756 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRAT--RBM46 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRAT^ENSG00000121207.12 | chr4:154744866:+ | RBM46^ENSG00000151962.8 | chr4:154796742:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1404:6380:27217 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr4:0.03Mb]"",""NEIGHBORS[28093]""]" | chr4:154744866-chr4:154796742 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LMO7--UCHL3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LMO7^ENSG00000136153.20 | chr13:75623320:+ | UCHL3^ENSG00000118939.18 | chr13:75594915:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:5085:14634 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9219 | "[""Klijn_CellLines"",""TumorFusionsNAR2018"",""INTRACHROMOSOMAL[chr13:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[14414]""]" | chr13:75623320-chr13:75594915 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LMBRD1--PAK1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LMBRD1^ENSG00000168216.13 | chr6:69737942:- | PAK1^ENSG00000149269.10 | chr11:77474669:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2221:31985:4139 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.2366 | "[""INTERCHROMOSOMAL[chr6--chr11]""]" | chr6:69737942-chr11:77474669 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LLPH--SNRPA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LLPH^ENSG00000139233.7 | chr12:66130705:- | SNRPA1^ENSG00000131876.17 | chr15:101285790:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2229:19639:12014 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr15]""]" | chr12:66130705-chr15:101285790 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LIPH--LNP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LIPH^ENSG00000163898.10 | chr3:185552423:- | LNP1^ENSG00000206535.8 | chr3:100429697:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:37397:10150 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr3:85.05Mb]""]" | chr3:185552423-chr3:100429697 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINS1--ST8SIA1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINS1^ENSG00000140471.17 | chr15:100580263:- | ST8SIA1^ENSG00000111728.11 | chr12:22150234:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:20319:25269 | . | NO_LDAS | 0.0017 | GT | 1.6402 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr12]""]" | chr15:100580263-chr12:22150234 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINS1--AL589740.1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINS1^ENSG00000140471.17 | chr15:100580263:- | AL589740.1^ENSG00000271860.7 | chr6:97612168:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:20319:25269 | . | NO_LDAS | 0.0017 | GT | 1.6402 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr6]""]" | chr15:100580263-chr6:97612168 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02882--CD83 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02882^ENSG00000251138.7 | chr12:74157790:- | CD83^ENSG00000112149.10 | chr6:14117950:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2190:29517:15867 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:74157790-chr6:14117950 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02680--CCDC7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02680^ENSG00000285737.1 | chr10:27578713:+ | CCDC7^ENSG00000216937.13 | chr10:32565558:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:5992:25227 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr10:4.85Mb]""]" | chr10:27578713-chr10:32565558 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02643--NEBL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC02643^ENSG00000230109.1 | chr10:21340142:- | NEBL^ENSG00000078114.19 | chr10:21020201:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:6275:7193 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr10:0.05Mb]"",""NEIGHBORS[47222]""]" | chr10:21340142-chr10:21020201 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02609--ZNF644 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02609^ENSG00000233593.10 | chr1:90831930:- | ZNF644^ENSG00000122482.21 | chr1:90918154:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1315:23248:17647 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[63640]""]" | chr1:90831930-chr1:90918154 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02340--USP12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02340^ENSG00000275294.4 | chr13:27186506:- | USP12^ENSG00000152484.14 | chr13:27116596:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2320:5417:2794 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr13:0.01Mb]"",""NEIGHBORS[6452]""]" | chr13:27186506-chr13:27116596 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LINC02210--CRHR1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINC02210^ENSG00000204650.14 | chr17:45622041:+ | CRHR1^ENSG00000120088.15 | chr17:45807010:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2468:41571:10963 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.4295 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:45622041-chr17:45807010 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02043--GRAMD1C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02043^ENSG00000232233.1 | chr3:186823545:- | GRAMD1C^ENSG00000178075.20 | chr3:113901031:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1315:19817:1392 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:72.86Mb]""]" | chr3:186823545-chr3:113901031 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02008--FBXL20 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02008^ENSG00000239440.6 | chr3:82185453:+ | FBXL20^ENSG00000108306.13 | chr17:39343241:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1415:20311:20939 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:82185453-chr17:39343241 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01968--COX10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01968^ENSG00000237222.4 | chr3:194768472:+ | COX10^ENSG00000006695.12 | chr17:14191989:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:49483:29627 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:194768472-chr17:14191989 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LINC01876--GPD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01876^ENSG00000226383.7 | chr2:156254778:- | GPD2^ENSG00000115159.16 | chr2:156476098:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1282:29477:14592 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.18Mb]""]" | chr2:156254778-chr2:156476098 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01778--ATL3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01778^ENSG00000223382.5 | chr1:30826652:+ | ATL3^ENSG00000184743.13 | chr11:63636334:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2142:29695:9085 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:30826652-chr11:63636334 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01721--RAB28 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01721^ENSG00000230133.2 | chr20:24219702:+ | RAB28^ENSG00000157869.16 | chr4:13479526:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:7221:23798 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr20--chr4]""]" | chr20:24219702-chr4:13479526 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01711--TMEM231 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01711^ENSG00000268941.2 | chr20:58635441:+ | TMEM231^ENSG00000205084.11 | chr16:75555951:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2245:30075:16414 | . | YES_LDAS | 0.0034 | GC | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr20--chr16]""]" | chr20:58635441-chr16:75555951 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01696--TMEM106C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01696^ENSG00000227940.2 | chr1:209327275:+ | TMEM106C^ENSG00000134291.12 | chr12:47967208:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1163:7068:17058 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:209327275-chr12:47967208 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LINC01666--PSMD14 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | LINC01666^ENSG00000279579.3 | chr21:8761334:+ | PSMD14^ENSG00000115233.12 | chr2:161367478:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:21152:12616 | . | YES_LDAS | 0.0011 | GT | 1.7968 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr21--chr2]""]" | chr21:8761334-chr2:161367478 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01572--C16orf46 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01572^ENSG00000261008.7 | chr16:72664892:- | C16orf46^ENSG00000166455.14 | chr16:81062138:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:37138:12168 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr16:8.39Mb]""]" | chr16:72664892-chr16:81062138 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01515--OCIAD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01515^ENSG00000228065.11 | chr10:65615761:+ | OCIAD2^ENSG00000145247.12 | chr4:48892889:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1426:5935:6661 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr10--chr4]""]" | chr10:65615761-chr4:48892889 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01505--AL138778.1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINC01505^ENSG00000234323.8 | chr9:106500505:+ | AL138778.1^ENSG00000286285.1 | chr1:193457641:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1405:49548:1406 | . | YES_LDAS | 0.0017 | GT | 1.5329 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:106500505-chr1:193457641 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01492--UBE2E2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01492^ENSG00000225564.6 | chr9:103188046:- | UBE2E2^ENSG00000182247.10 | chr3:23499608:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:13467:27721 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr3]""]" | chr9:103188046-chr3:23499608 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01473--SCOC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01473^ENSG00000237877.7 | chr2:186178599:- | SCOC^ENSG00000153130.18 | chr4:140379121:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1383:31758:19833 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:186178599-chr4:140379121 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01470--INVS | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01470^ENSG00000249484.9 | chr5:152623231:- | INVS^ENSG00000119509.13 | chr9:100104498:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1467:42210:8398 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr5--chr9]""]" | chr5:152623231-chr9:100104498 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01376--LDAH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01376^ENSG00000236204.6 | chr2:19125252:- | LDAH^ENSG00000118961.15 | chr2:20790398:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:45713:2219 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr2:1.34Mb]""]" | chr2:19125252-chr2:20790398 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01145--SRGAP2B | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | LINC01145^ENSG00000272419.6 | chr1:145214677:- | SRGAP2B^ENSG00000196369.11 | chr1:144995200:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1459:39371:20827 | . | YES_LDAS | 0.0011 | GT | 1.7819 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:0.07Mb]"",""NEIGHBORS[68571]""]" | chr1:145214677-chr1:144995200 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LINC01106--ZNF800 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | LINC01106^ENSG00000175772.11 | chr2:110384315:- | ZNF800^ENSG00000048405.10 | chr7:127373479:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2418:42194:5036 | . | YES_LDAS | 0.0017 | GC | 1.9086 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:110384315-chr7:127373479 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01031--AL138778.1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINC01031^ENSG00000232077.2 | chr1:193304938:+ | AL138778.1^ENSG00000286285.1 | chr1:193457641:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1405:49548:1406 | . | YES_LDAS | 0.0017 | GT | 1.5329 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr1:0.09Mb]"",""NEIGHBORS[91469]""]" | chr1:193304938-chr1:193457641 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LINC00987--PALB2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC00987^ENSG00000237248.5 | chr12:9240293:+ | PALB2^ENSG00000083093.10 | chr16:23635267:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2193:10304:29137 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr16]""]" | chr12:9240293-chr16:23635267 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC00896--POFUT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC00896^ENSG00000236499.2 | chr22:20206464:+ | POFUT2^ENSG00000186866.17 | chr21:45277142:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1281:43772:16203 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr21]""]" | chr22:20206464-chr21:45277142 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC00894--HSFX3 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINC00894^ENSG00000235703.6 | chrX:149960948:+ | HSFX3^ENSG00000283697.3 | chrX:149548910:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2392:19955:7151 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chrX:0.39Mb]""]" | chrX:149960948-chrX:149548910 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC00882--MED14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC00882^ENSG00000242759.8 | chr3:107114753:- | MED14^ENSG00000180182.11 | chrX:40729345:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1232:9155:20589 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chrX]""]" | chr3:107114753-chrX:40729345 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC00707--GNA14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC00707^ENSG00000238266.2 | chr10:6789681:+ | GNA14^ENSG00000156049.7 | chr9:77431531:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:23903:22761 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr9]""]" | chr10:6789681-chr9:77431531 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LINC00552--TMEM43 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC00552^ENSG00000279770.1 | chr13:113750025:- | TMEM43^ENSG00000170876.8 | chr3:14129412:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2266:32591:10150 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr13--chr3]""]" | chr13:113750025-chr3:14129412 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LINC00115--AC240565.1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | LINC00115^ENSG00000225880.5 | chr1:827484:- | AC240565.1^ENSG00000280136.2 | chr17:106864:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:9891:9029 | . | YES_LDAS | 0.0008 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:827484-chr17:106864 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC-PINT--TSPAN9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC-PINT^ENSG00000231721.7 | chr7:130941413:- | TSPAN9^ENSG00000011105.14 | chr12:3201177:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:32527:15419 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:130941413-chr12:3201177 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LINC-PINT--SUPT3H | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC-PINT^ENSG00000231721.7 | chr7:130945720:- | SUPT3H^ENSG00000196284.17 | chr6:45365301:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2101:26378:10963 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr6]""]" | chr7:130945720-chr6:45365301 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC-PINT--CHM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC-PINT^ENSG00000231721.7 | chr7:130945720:- | CHM^ENSG00000188419.14 | chrX:85964052:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1491:28611:22649 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr7--chrX]""]" | chr7:130945720-chrX:85964052 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LIN7C--NIPA2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LIN7C^ENSG00000148943.12 | chr11:27506716:- | NIPA2^ENSG00000140157.16 | chr15:22858540:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1249:33894:13779 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:27506716-chr15:22858540 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LIN52--TMEM135 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LIN52^ENSG00000205659.11 | chr14:74101238:+ | TMEM135^ENSG00000166575.17 | chr11:87157341:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1164:5126:19412 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr14--chr11]""]" | chr14:74101238-chr11:87157341 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LIN52--NRIP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LIN52^ENSG00000205659.11 | chr14:74198973:+ | NRIP1^ENSG00000180530.11 | chr21:15065893:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2418:1356:23728 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr14--chr21]""]" | chr14:74198973-chr21:15065893 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LIAS--LINC00674 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LIAS^ENSG00000121897.15 | chr4:39466117:+ | LINC00674^ENSG00000237854.3 | chr17:68114422:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1137:22495:18810 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr17]""]" | chr4:39466117-chr17:68114422 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LIAS--KIF27 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LIAS^ENSG00000121897.15 | chr4:39466117:+ | KIF27^ENSG00000165115.15 | chr9:83915678:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2223:23992:20477 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr4--chr9]""]" | chr4:39466117-chr9:83915678 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LFNG--ZNF821 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | LFNG^ENSG00000106003.13 | chr7:2527337:+ | ZNF821^ENSG00000102984.15 | chr16:71864940:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2223:27009:11803 | . | NO_LDAS | 0.0011 | GT | 1.5058 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chr16]""]" | chr7:2527337-chr16:71864940 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LCMT1--FTLP10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LCMT1^ENSG00000205629.12 | chr16:25111996:+ | FTLP10^ENSG00000250426.2 | chr4:68212406:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:36159:5988 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr16--chr4]""]" | chr16:25111996-chr4:68212406 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LCA5--KIAA0753 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LCA5^ENSG00000135338.14 | chr6:79518705:- | KIAA0753^ENSG00000198920.11 | chr17:6620869:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1267:15659:7530 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr6--chr17]""]" | chr6:79518705-chr17:6620869 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LAT2--ARHGAP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LAT2^ENSG00000086730.17 | chr7:74220619:+ | ARHGAP1^ENSG00000175220.12 | chr11:46688202:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2469:28231:9632 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr7--chr11]""]" | chr7:74220619-chr11:46688202 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LARGE-AS1--TMTC2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LARGE-AS1^ENSG00000224973.6 | chr22:33725101:+ | TMTC2^ENSG00000179104.9 | chr12:82687507:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2113:1324:10108 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr22--chr12]""]" | chr22:33725101-chr12:82687507 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LAP3--SLC4A8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LAP3^ENSG00000002549.13 | chr4:17588977:+ | SLC4A8^ENSG00000050438.17 | chr12:51485787:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:5247:28646 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:17588977-chr12:51485787 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LAMTOR1--FBLN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LAMTOR1^ENSG00000149357.10 | chr11:72097843:- | FBLN1^ENSG00000077942.19 | chr22:45527876:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1217:15360:27049 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr11--chr22]""]" | chr11:72097843-chr22:45527876 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LACTB--ZFAND6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LACTB^ENSG00000103642.12 | chr15:63127689:+ | ZFAND6^ENSG00000086666.19 | chr15:80120328:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2349:5377:20575 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr15:16.92Mb]""]" | chr15:63127689-chr15:80120328 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KRTAP5-AS1--AP000867.5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KRTAP5-AS1^ENSG00000233930.4 | chr11:1598277:+ | AP000867.5^ENSG00000286948.1 | chr11:71563684:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2362:12415:17885 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr11:69.96Mb]""]" | chr11:1598277-chr11:71563684 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| KRTAP12-1--NSMAF | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KRTAP12-1^ENSG00000187175.5 | chr21:44682032:- | NSMAF^ENSG00000035681.9 | chr8:58599363:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1376:13159:15559 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr21--chr8]""]" | chr21:44682032-chr8:58599363 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KRT42P--OGDHL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KRT42P^ENSG00000214514.8 | chr17:41634536:- | OGDHL^ENSG00000197444.10 | chr10:49752740:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1212:41474:27357 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr17--chr10]""]" | chr17:41634536-chr10:49752740 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KRT18P55--IAH1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KRT18P55^ENSG00000265480.5 | chr17:28307135:- | IAH1^ENSG00000134330.19 | chr2:9474582:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1139:22552:17815 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:28307135-chr2:9474582 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KRR1--NIPA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KRR1^ENSG00000111615.14 | chr12:75511513:- | NIPA1^ENSG00000170113.16 | chr15:22810749:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2497:51255:2177 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr15]""]" | chr12:75511513-chr15:22810749 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KLRC4--KLRK1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KLRC4^ENSG00000183542.5 | chr12:10407636:- | KLRK1^ENSG00000213809.9 | chr12:10388875:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:8677:16764 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9219 | "[""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr12:0.02Mb]"",""NEIGHBORS[15508]""]" | chr12:10407636-chr12:10388875 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| KIFBP--AL162430.1 | 1 | 0 | 0.14 | 0.0 | INCL_NON_REF_SPLICE | KIFBP^ENSG00000198954.9 | chr10:68989105:+ | AL162430.1^ENSG00000233406.5 | chr1:51251340:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1348:37073:11495 | . | YES_LDAS | 0.0005 | GT | 1.7056 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:68989105-chr1:51251340 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KIF13A--NR3C2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KIF13A^ENSG00000137177.20 | chr6:17898168:- | NR3C2^ENSG00000151623.15 | chr4:148152613:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2336:45430:6157 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr6--chr4]""]" | chr6:17898168-chr4:148152613 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KIAA1328--ATP9B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KIAA1328^ENSG00000150477.15 | chr18:36835376:+ | ATP9B^ENSG00000166377.20 | chr18:79143802:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:41377:14830 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr18:41.84Mb]""]" | chr18:36835376-chr18:79143802 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KIAA0825--FAM172A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KIAA0825^ENSG00000185261.14 | chr5:94384368:- | FAM172A^ENSG00000113391.19 | chr5:94074769:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2446:12334:9029 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[41267]""]" | chr5:94384368-chr5:94074769 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| KIAA0753--LPIN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KIAA0753^ENSG00000198920.11 | chr17:6596324:- | LPIN1^ENSG00000134324.12 | chr2:11782393:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2393:52016:7109 | . | NO_LDAS | 0.0034 | AT | 1.7465 | AC | 1.9656 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:6596324-chr2:11782393 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KIAA0586--TOMM20L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KIAA0586^ENSG00000100578.18 | chr14:58512627:+ | TOMM20L^ENSG00000196860.8 | chr14:58402680:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1257:23514:12056 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr14:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[18683]""]" | chr14:58512627-chr14:58402680 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KDELR2--IQCG | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KDELR2^ENSG00000136240.10 | chr7:6463106:- | IQCG^ENSG00000114473.14 | chr3:197958823:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2475:12350:27385 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr7--chr3]""]" | chr7:6463106-chr3:197958823 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KCTD9P2--AC091185.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | KCTD9P2^ENSG00000181819.14 | chrX:105406795:+ | AC091185.1^ENSG00000253476.1 | chr8:25426327:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:38360:11061 | . | YES_LDAS | 0.0017 | GT | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chrX--chr8]""]" | chrX:105406795-chr8:25426327 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KCNT2--MIER2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KCNT2^ENSG00000162687.19 | chr1:196342079:- | MIER2^ENSG00000105556.11 | chr19:313511:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1139:38707:22761 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:196342079-chr19:313511 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KCNQ1--AP001282.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | KCNQ1^ENSG00000053918.18 | chr11:2528018:+ | AP001282.1^ENSG00000213252.3 | chr11:106826778:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:46870:26530 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr11:103.98Mb]""]" | chr11:2528018-chr11:106826778 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KCNH2--NAGPA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KCNH2^ENSG00000055118.16 | chr7:150948444:- | NAGPA^ENSG00000103174.13 | chr16:5025521:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1395:4867:4167 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr7--chr16]""]" | chr7:150948444-chr16:5025521 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KATNAL2--EPG5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KATNAL2^ENSG00000167216.17 | chr18:46946923:+ | EPG5^ENSG00000152223.15 | chr18:45855687:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2393:42615:28716 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr18:0.95Mb]""]" | chr18:46946923-chr18:45855687 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KASH5--C7orf50 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KASH5^ENSG00000161609.10 | chr19:49395146:+ | C7orf50^ENSG00000146540.15 | chr7:1010086:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2234:18175:18137 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr7]""]" | chr19:49395146-chr7:1010086 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KANK3--BTC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KANK3^ENSG00000186994.11 | chr19:8337795:- | BTC^ENSG00000174808.12 | chr4:74748149:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1321:10651:19959 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr19--chr4]""]" | chr19:8337795-chr4:74748149 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KANK1--IL17RE | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KANK1^ENSG00000107104.20 | chr9:473273:+ | IL17RE^ENSG00000163701.19 | chr3:9906364:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:22892:3522 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr9--chr3]""]" | chr9:473273-chr3:9906364 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| JPH1--JPH4 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | JPH1^ENSG00000104369.5 | chr8:74237208:- | JPH4^ENSG00000092051.17 | chr14:23576456:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:23870:24555 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr8--chr14]""]" | chr8:74237208-chr14:23576456 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| JPH1--JPH3 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | JPH1^ENSG00000104369.5 | chr8:74237208:- | JPH3^ENSG00000154118.13 | chr16:87644258:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:23870:24555 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chr16]""]" | chr8:74237208-chr16:87644258 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| JMJD7--YJEFN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | JMJD7^ENSG00000243789.11 | chr15:41836551:+ | YJEFN3^ENSG00000250067.12 | chr19:19529364:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1204:34614:10346 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr19]""]" | chr15:41836551-chr19:19529364 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| JAZF1--AL023775.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | JAZF1^ENSG00000153814.13 | chr7:28180463:- | AL023775.1^ENSG00000235008.1 | chr6:166702664:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2370:48755:15783 | . | NO_LDAS | 0.0017 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr6]""]" | chr7:28180463-chr6:166702664 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ITFG2--DDT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ITFG2^ENSG00000111203.13 | chr12:2820225:+ | DDT^ENSG00000099977.14 | chr22:23971623:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1314:31645:4503 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr22]""]" | chr12:2820225-chr22:23971623 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ITFG1--PHKB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ITFG1^ENSG00000129636.13 | chr16:47428804:- | PHKB^ENSG00000102893.16 | chr16:47497399:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2180:12965:5974 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""DEEPEST2019"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr16:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[3026]""]" | chr16:47428804-chr16:47497399 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ISY1--ACSS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ISY1^ENSG00000240682.10 | chr3:129130550:- | ACSS1^ENSG00000154930.15 | chr20:25012826:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:1534:27511 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr3--chr20]""]" | chr3:129130550-chr20:25012826 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ISCA1--GOLM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ISCA1^ENSG00000135070.15 | chr9:86272007:- | GOLM1^ENSG00000135052.16 | chr9:86079341:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:28425:3746 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.16Mb]""]" | chr9:86272007-chr9:86079341 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| IQCK--ZNF804B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IQCK^ENSG00000174628.16 | chr16:19735450:+ | ZNF804B^ENSG00000182348.7 | chr7:89338518:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2177:24137:5708 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr16--chr7]""]" | chr16:19735450-chr7:89338518 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IQCH-AS1--AC108471.3 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | IQCH-AS1^ENSG00000259673.6 | chr15:67519000:- | AC108471.3^ENSG00000286349.1 | chr4:39615146:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:33587:12714 | . | YES_LDAS | 0.0017 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr4]""]" | chr15:67519000-chr4:39615146 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| IPPK--ATG7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IPPK^ENSG00000127080.10 | chr9:92652573:- | ATG7^ENSG00000197548.12 | chr3:11298686:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2111:25763:3873 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr9--chr3]""]" | chr9:92652573-chr3:11298686 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IPP--AD001527.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IPP^ENSG00000197429.11 | chr1:45727631:- | AD001527.1^ENSG00000270760.1 | chr19:36148044:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:22851:6899 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:45727631-chr19:36148044 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IPO11--SREK1IP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IPO11^ENSG00000086200.17 | chr5:62412929:+ | SREK1IP1^ENSG00000153006.16 | chr5:64741200:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2132:30229:15615 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr5:2.09Mb]""]" | chr5:62412929-chr5:64741200 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| INTS4--AC104073.4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | INTS4^ENSG00000149262.17 | chr11:77891319:- | AC104073.4^ENSG00000282381.1 | chr7:65303529:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:14251:19076 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr11--chr7]""]" | chr11:77891319-chr7:65303529 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| INSL3--NPR2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | INSL3^ENSG00000248099.4 | chr19:17821456:- | NPR2^ENSG00000159899.15 | chr9:35800389:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1305:48925:10388 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr19--chr9]""]" | chr19:17821456-chr9:35800389 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| INSC--LINC02751 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | INSC^ENSG00000188487.12 | chr11:15269627:+ | LINC02751^ENSG00000254946.2 | chr11:15561878:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1459:12067:16385 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr11:0.31Mb]""]" | chr11:15269627-chr11:15561878 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| INPP4B--CNN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | INPP4B^ENSG00000109452.12 | chr4:142402938:- | CNN3^ENSG00000117519.16 | chr1:94903524:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2325:15797:14382 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:142402938-chr1:94903524 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| INPP4B--ACTR3B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | INPP4B^ENSG00000109452.12 | chr4:142124649:- | ACTR3B^ENSG00000133627.18 | chr7:152820348:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:20367:24849 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr4--chr7]""]" | chr4:142124649-chr7:152820348 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ING3--CMC4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ING3^ENSG00000071243.16 | chr7:120955624:+ | CMC4^ENSG00000182712.16 | chrX:155064033:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:17827:6857 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chrX]""]" | chr7:120955624-chrX:155064033 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IMPDH1--AC004623.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IMPDH1^ENSG00000106348.18 | chr7:128409756:- | AC004623.1^ENSG00000279488.1 | chr19:1373884:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2302:29291:3844 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:128409756-chr19:1373884 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IMPA1--SLC10A5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IMPA1^ENSG00000133731.10 | chr8:81673841:- | SLC10A5^ENSG00000253598.3 | chr8:81694923:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2149:37470:4811 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[7300]""]" | chr8:81673841-chr8:81694923 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IMMP1L--ZNF607 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IMMP1L^ENSG00000148950.11 | chr11:31488128:- | ZNF607^ENSG00000198182.13 | chr19:37711692:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2161:29598:17857 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:31488128-chr19:37711692 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ILRUN--TMCO4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ILRUN^ENSG00000196821.10 | chr6:34588913:- | TMCO4^ENSG00000162542.14 | chr1:19682807:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:46215:12981 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:34588913-chr1:19682807 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IL7--AC068700.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IL7^ENSG00000104432.14 | chr8:78798128:- | AC068700.2^ENSG00000286675.1 | chr8:78630426:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:3508:29389 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS[9761]""]" | chr8:78798128-chr8:78630426 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| IL22RA1--SMAP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IL22RA1^ENSG00000142677.4 | chr1:24137127:- | SMAP2^ENSG00000084070.12 | chr1:40414172:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1107:42939:1897 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr1:16.20Mb]""]" | chr1:24137127-chr1:40414172 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IL1RAP--CEP70 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IL1RAP^ENSG00000196083.10 | chr3:190514219:+ | CEP70^ENSG00000114107.9 | chr3:138529462:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:25327:8413 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr3:51.92Mb]""]" | chr3:190514219-chr3:138529462 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IL15RA--AC109630.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | IL15RA^ENSG00000134470.21 | chr10:5977405:- | AC109630.1^ENSG00000259269.2 | chr15:39496646:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2476:41588:29011 | . | NO_LDAS | 0.0017 | GT | 1.2729 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:5977405-chr15:39496646 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IL10RB--IFNAR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IL10RB^ENSG00000243646.10 | chr21:33288261:+ | IFNAR2^ENSG00000159110.20 | chr21:33241886:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:31928:2107 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.6729 | "[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr21:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[692]""]" | chr21:33288261-chr21:33241886 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 1 | ||||||
| IK--TMEM254 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IK^ENSG00000113141.18 | chr5:140655992:+ | TMEM254^ENSG00000133678.14 | chr10:80090797:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1276:25205:28772 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr10]""]" | chr5:140655992-chr10:80090797 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IFT88--RRN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IFT88^ENSG00000032742.18 | chr13:20598753:+ | RRN3^ENSG00000085721.13 | chr16:15073080:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2189:39225:21640 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr13--chr16]""]" | chr13:20598753-chr16:15073080 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IFT43--TTC22 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IFT43^ENSG00000119650.13 | chr14:76059373:+ | TTC22^ENSG00000006555.11 | chr1:54782444:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:34226:10907 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr14--chr1]""]" | chr14:76059373-chr1:54782444 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IFT43--FAM122C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IFT43^ENSG00000119650.13 | chr14:75902224:+ | FAM122C^ENSG00000156500.15 | chrX:134835679:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1263:45980:27035 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr14--chrX]""]" | chr14:75902224-chrX:134835679 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IFT122--MAGT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IFT122^ENSG00000163913.12 | chr3:129458015:+ | MAGT1^ENSG00000102158.20 | chrX:77870925:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2351:48561:6423 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr3--chrX]""]" | chr3:129458015-chrX:77870925 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IFFO2--NKIRAS2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IFFO2^ENSG00000169991.11 | chr1:18908530:- | NKIRAS2^ENSG00000168256.18 | chr17:42025204:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2282:39403:21024 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:18908530-chr17:42025204 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HSPH1--WDFY2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HSPH1^ENSG00000120694.20 | chr13:31154633:- | WDFY2^ENSG00000139668.9 | chr13:51759740:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1139:14785:22915 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr13:20.42Mb]""]" | chr13:31154633-chr13:51759740 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HSPH1--ELAPOR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HSPH1^ENSG00000120694.20 | chr13:31149954:- | ELAPOR1^ENSG00000116299.17 | chr1:109204068:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2131:40503:21892 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr1]""]" | chr13:31149954-chr1:109204068 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HSPE1--NBN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HSPE1^ENSG00000115541.11 | chr2:197501238:+ | NBN^ENSG00000104320.14 | chr8:89958854:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2125:17350:8188 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr2--chr8]""]" | chr2:197501238-chr8:89958854 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HSPA1B--ASB17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HSPA1B^ENSG00000204388.7 | chr6:31829997:+ | ASB17^ENSG00000154007.7 | chr1:75931917:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2283:40698:20379 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:31829997-chr1:75931917 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| HSF2--TAMM41 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HSF2^ENSG00000025156.13 | chr6:122432005:+ | TAMM41^ENSG00000144559.10 | chr3:11808629:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1197:10797:24246 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr3]""]" | chr6:122432005-chr3:11808629 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HSDL2--EPB41L4A-AS1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | HSDL2^ENSG00000119471.15 | chr9:112470563:+ | EPB41L4A-AS1^ENSG00000224032.7 | chr5:112160997:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:22778:1532 | . | NO_LDAS | 0.0017 | GT | 0.5665 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr9--chr5]""]" | chr9:112470563-chr5:112160997 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HSBP1L1--BDH1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HSBP1L1^ENSG00000226742.4 | chr18:79966762:+ | BDH1^ENSG00000161267.12 | chr3:197522693:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1440:33538:14704 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr18--chr3]""]" | chr18:79966762-chr3:197522693 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HRH4--IMPACT | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HRH4^ENSG00000134489.7 | chr18:24477077:+ | IMPACT^ENSG00000154059.11 | chr18:24428869:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2281:50268:29641 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr18:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[7106]""]" | chr18:24477077-chr18:24428869 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HPCAL4--VSNL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HPCAL4^ENSG00000116983.13 | chr1:39683937:- | VSNL1^ENSG00000163032.12 | chr2:17592070:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:6784:8693 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6402 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:39683937-chr2:17592070 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| HOXB13--STRIP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HOXB13^ENSG00000159184.8 | chr17:48728645:- | STRIP1^ENSG00000143093.15 | chr1:110041734:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1167:36847:6535 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:48728645-chr1:110041734 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HNRNPCP2--PLCH2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HNRNPCP2^ENSG00000204253.4 | chr2:189923644:+ | PLCH2^ENSG00000149527.18 | chr1:2479814:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2201:13685:6465 | . | YES_LDAS | 0.0034 | AT | 1.8892 | AC | 1.7968 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:189923644-chr1:2479814 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HNRNPA1P3--HNRNPA1P7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HNRNPA1P3^ENSG00000226188.2 | chr20:45745982:- | HNRNPA1P7^ENSG00000215492.6 | chr18:32412975:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1402:36774:15965 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr18]""]" | chr20:45745982-chr18:32412975 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HMOX2--NAGPA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HMOX2^ENSG00000103415.12 | chr16:4507012:+ | NAGPA^ENSG00000103174.13 | chr16:5031884:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:18094:20968 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr16:0.51Mb]""]" | chr16:4507012-chr16:5031884 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HMGA1P4--PCCA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HMGA1P4^ENSG00000234705.2 | chr9:128684366:- | PCCA^ENSG00000175198.17 | chr13:100330561:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1314:10579:17675 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr9--chr13]""]" | chr9:128684366-chr13:100330561 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HMGA1P3--KIAA0753 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | HMGA1P3^ENSG00000258011.2 | chr12:110430108:- | KIAA0753^ENSG00000198920.11 | chr17:6607024:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2317:2853:8665 | . | YES_LDAS | 0.0017 | GC | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr17]""]" | chr12:110430108-chr17:6607024 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HLF--NPM1P21 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HLF^ENSG00000108924.14 | chr17:55265062:+ | NPM1P21^ENSG00000248578.1 | chr8:56101596:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1261:42089:2499 | . | NO_LDAS | 0.0034 | GT | 0.9056 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr17--chr8]""]" | chr17:55265062-chr8:56101596 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HLA-F-AS1--YJEFN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HLA-F-AS1^ENSG00000214922.9 | chr6:29748900:- | YJEFN3^ENSG00000250067.12 | chr19:19535034:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1141:48602:9267 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:29748900-chr19:19535034 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HIGD1A--CCDC13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HIGD1A^ENSG00000181061.14 | chr3:42804436:- | CCDC13^ENSG00000244607.7 | chr3:42758346:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2424:40601:28422 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8323 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[9655]""]" | chr3:42804436-chr3:42758346 | False | 0 | Excluded | annotation | pattern: | ConjoinG | FAIL | 1 | ||||||
| HHAT--SENP7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HHAT^ENSG00000054392.13 | chr1:210588099:+ | SENP7^ENSG00000138468.16 | chr3:101372126:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1345:44379:21878 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:210588099-chr3:101372126 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HEXIM2--ZFAS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HEXIM2^ENSG00000168517.10 | chr17:45162859:+ | ZFAS1^ENSG00000177410.13 | chr20:49289045:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2276:44807:12476 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr17--chr20]""]" | chr17:45162859-chr20:49289045 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HERC4--TUBD1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HERC4^ENSG00000148634.16 | chr10:67954595:- | TUBD1^ENSG00000108423.15 | chr17:59860353:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2436:28781:13611 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr17]""]" | chr10:67954595-chr17:59860353 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| HERC2P10--GOLGA8UP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HERC2P10^ENSG00000259845.1 | chr15:30836910:+ | GOLGA8UP^ENSG00000103832.10 | chr15:30793291:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2209:39913:12014 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.5058 | "[""INTRACHROMOSOMAL[chr15:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[13412]""]" | chr15:30836910-chr15:30793291 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HELQ--ABRAXAS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HELQ^ENSG00000163312.11 | chr4:83448783:- | ABRAXAS1^ENSG00000163322.14 | chr4:83469151:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1206:33174:15026 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9219 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr4:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[3662]""]" | chr4:83448783-chr4:83469151 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HELLS--FAM114A2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HELLS^ENSG00000119969.15 | chr10:94571429:+ | FAM114A2^ENSG00000055147.19 | chr5:154029560:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1298:50851:7614 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr5]""]" | chr10:94571429-chr5:154029560 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HELLPAR--PARPBP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HELLPAR^ENSG00000281344.1 | chr12:102205157:+ | PARPBP^ENSG00000185480.12 | chr12:102148230:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2132:29550:26544 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr12:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[65]""]" | chr12:102205157-chr12:102148230 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HDHD5--DCAF17 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | HDHD5^ENSG00000069998.12 | chr22:17142964:- | DCAF17^ENSG00000115827.14 | chr2:171448681:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2358:26799:12588 | . | NO_LDAS | 0.0008 | GT | 1.9086 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr22--chr2]""]" | chr22:17142964-chr2:171448681 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HDHD2--ZNF407 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HDHD2^ENSG00000167220.12 | chr18:47150378:- | ZNF407^ENSG00000215421.9 | chr18:74781428:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:18547:16960 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr18:27.45Mb]""]" | chr18:47150378-chr18:74781428 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HCG9--TMEM61 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HCG9^ENSG00000204625.10 | chr6:29975517:+ | TMEM61^ENSG00000143001.5 | chr1:54980954:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:13216:10556 | . | NO_LDAS | 0.0034 | GT | 1.1589 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:29975517-chr1:54980954 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HAUS7--ECHDC2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HAUS7^ENSG00000213397.11 | chrX:153470828:- | ECHDC2^ENSG00000121310.17 | chr1:52911790:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:8022:1084 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chrX--chr1]""]" | chrX:153470828-chr1:52911790 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HAUS5--CLCN2 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | HAUS5^ENSG00000249115.9 | chr19:35618658:+ | CLCN2^ENSG00000114859.16 | chr3:184355460:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:44702:10921 | . | NO_LDAS | 0.0011 | GT | 1.6895 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:35618658-chr3:184355460 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HAUS3--MXD4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HAUS3^ENSG00000214367.9 | chr4:2080958:- | MXD4^ENSG00000123933.17 | chr4:2252522:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:42939:25129 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr4:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5156]""]" | chr4:2080958-chr4:2252522 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| H4C8--AC006122.1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | H4C8^ENSG00000158406.5 | chr6:26285448:- | AC006122.1^ENSG00000213970.4 | chr12:4324635:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:3937:23069 | . | YES_LDAS | 0.0008 | GT | 1.6895 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr6--chr12]""]" | chr6:26285448-chr12:4324635 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| H3P35--H3P16 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | H3P35^ENSG00000257287.1 | chr12:72432001:- | H3P16^ENSG00000178458.5 | chr4:139698481:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:42841:8735 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:72432001-chr4:139698481 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| H3C15--H3P17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | H3C15^ENSG00000203852.3 | chr1:149852814:+ | H3P17^ENSG00000248205.1 | chr5:17502219:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1356:6631:23784 | . | NO_LDAS | 0.0034 | GC | 1.7968 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:149852814-chr5:17502219 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| H2BC11--BVES | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | H2BC11^ENSG00000124635.9 | chr6:27132525:- | BVES^ENSG00000112276.14 | chr6:105133588:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2481:45535:23854 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr6:77.96Mb]""]" | chr6:27132525-chr6:105133588 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GUCA1B--MRPS10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GUCA1B^ENSG00000112599.9 | chr6:42188582:- | MRPS10^ENSG00000048544.6 | chr6:42211917:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1305:4414:11733 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr6:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[11851]""]" | chr6:42188582-chr6:42211917 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GTPBP10--RFC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GTPBP10^ENSG00000105793.16 | chr7:90346774:+ | RFC1^ENSG00000035928.16 | chr4:39304928:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:30173:21178 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr4]""]" | chr7:90346774-chr4:39304928 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GTF2IP20--GTF2IP1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | GTF2IP20^ENSG00000272645.3 | chr1:223988045:- | GTF2IP1^ENSG00000277053.4 | chr7:75210599:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2421:41539:27581 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:223988045-chr7:75210599 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GTF2H5--MILR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GTF2H5^ENSG00000272047.3 | chr6:158170538:+ | MILR1^ENSG00000271605.6 | chr17:64468334:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:24809:13793 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr17]""]" | chr6:158170538-chr17:64468334 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GTF2E2--PCMTD2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GTF2E2^ENSG00000197265.9 | chr8:30658137:- | PCMTD2^ENSG00000203880.12 | chr20:64255877:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2459:22236:22425 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr8--chr20]""]" | chr8:30658137-chr20:64255877 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GTDC1--PDP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GTDC1^ENSG00000121964.14 | chr2:144145572:- | PDP2^ENSG00000172840.7 | chr16:66889483:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1373:1526:7067 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:144145572-chr16:66889483 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GSDMB--AC105219.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GSDMB^ENSG00000073605.18 | chr17:39912326:- | AC105219.3^ENSG00000254973.2 | chr8:143758435:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:15141:26054 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chr8]""]" | chr17:39912326-chr8:143758435 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GRIN2C--ANKRD33 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GRIN2C^ENSG00000161509.14 | chr17:74852640:- | ANKRD33^ENSG00000167612.13 | chr12:51888044:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:17868:26236 | . | NO_LDAS | 0.0034 | GC | 1.3996 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr17--chr12]""]" | chr17:74852640-chr12:51888044 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GRID2--RAPGEF6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GRID2^ENSG00000152208.13 | chr4:93626367:+ | RAPGEF6^ENSG00000158987.22 | chr5:131603291:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2488:40560:4615 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr5]""]" | chr4:93626367-chr5:131603291 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GPT--NENF | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GPT^ENSG00000167701.14 | chr8:144505530:+ | NENF^ENSG00000117691.10 | chr1:212433043:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1416:49006:29473 | . | YES_LDAS | 0.0034 | GT | 1.2366 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr8--chr1]""]" | chr8:144505530-chr1:212433043 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPSM2--EPM2A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPSM2^ENSG00000121957.15 | chr1:108904254:+ | EPM2A^ENSG00000112425.16 | chr6:145627693:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1469:27810:20421 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:108904254-chr6:145627693 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPRIN2--NPY4R | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GPRIN2^ENSG00000204175.5 | chr10:46550365:- | NPY4R^ENSG00000204174.8 | chr10:46462694:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1475:32341:1504 | . | YES_LDAS | 0.0017 | GT | 1.9656 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr10:0.08Mb]"",""NEIGHBORS[83086]""]" | chr10:46550365-chr10:46462694 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPRC5D-AS1--MAOB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPRC5D-AS1^ENSG00000247498.10 | chr12:12927803:+ | MAOB^ENSG00000069535.14 | chrX:43778739:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1442:26815:9225 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr12--chrX]""]" | chr12:12927803-chrX:43778739 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPRC5D-AS1--FAM234B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPRC5D-AS1^ENSG00000247498.10 | chr12:12979622:+ | FAM234B^ENSG00000084444.14 | chr12:13055551:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:43270:9393 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5219 | "[""INTRACHROMOSOMAL[chr12:0.06Mb]"",""NEIGHBORS[59736]""]" | chr12:12979622-chr12:13055551 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| GPRASP1--ALDH2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GPRASP1^ENSG00000198932.13 | chrX:102651328:+ | ALDH2^ENSG00000111275.13 | chr12:111798133:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:5466:6353 | . | YES_LDAS | 0.0034 | GT | 1.5546 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chrX--chr12]""]" | chrX:102651328-chr12:111798133 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPR173--WBP1P1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GPR173^ENSG00000184194.6 | chrX:53049484:+ | WBP1P1^ENSG00000231351.2 | chr2:86930685:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1228:41353:5008 | . | YES_LDAS | 0.0017 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrX--chr2]""]" | chrX:53049484-chr2:86930685 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPM6A--SCLT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPM6A^ENSG00000150625.16 | chr4:175673680:- | SCLT1^ENSG00000151466.12 | chr4:128936851:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2115:34970:26993 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8295 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr4:46.54Mb]""]" | chr4:175673680-chr4:128936851 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPHN--MNAT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPHN^ENSG00000171723.16 | chr14:66965325:+ | MNAT1^ENSG00000020426.11 | chr14:60879714:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1429:21484:12686 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr14:5.54Mb]""]" | chr14:66965325-chr14:60879714 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPATCH2L--CREBZF | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPATCH2L^ENSG00000089916.18 | chr14:76195972:+ | CREBZF^ENSG00000137504.14 | chr11:85663601:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1179:17253:19762 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr14--chr11]""]" | chr14:76195972-chr11:85663601 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPATCH2--SPATA17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GPATCH2^ENSG00000092978.11 | chr1:217610321:- | SPATA17^ENSG00000162814.11 | chr1:217741960:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:51918:22915 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_INVERSION:-:+:[234]""]" | chr1:217610321-chr1:217741960 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GOLIM4--SCUBE1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GOLIM4^ENSG00000173905.9 | chr3:168029220:- | SCUBE1^ENSG00000159307.19 | chr22:43227480:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:29995:13891 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chr22]""]" | chr3:168029220-chr22:43227480 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GOLGA8H--AC019322.1 | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | GOLGA8H^ENSG00000261794.1 | chr15:30607119:+ | AC019322.1^ENSG00000263070.1 | chr15:30386960:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2133:9260:4377 | . | NO_LDAS | 0.0003 | GT | 1.7465 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr15:0.22Mb]""]" | chr15:30607119-chr15:30386960 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GOLGA2P8--AC019294.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GOLGA2P8^ENSG00000214433.4 | chr15:90295157:+ | AC019294.1^ENSG00000187812.12 | chr15:75786372:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1343:3322:6815 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr15:14.51Mb]""]" | chr15:90295157-chr15:75786372 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GOLGA2P2Y--AC100827.2 | 1 | 0 | 0.14 | 0.0 | ONLY_REF_SPLICE | GOLGA2P2Y^ENSG00000239533.6 | chrY:24215462:- | AC100827.2^ENSG00000260144.1 | chr15:72607514:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1464:23280:27091 | . | NO_LDAS | 0.0005 | GT | 1.9656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chrY--chr15]""]" | chrY:24215462-chr15:72607514 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GNPAT--COG2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GNPAT^ENSG00000116906.13 | chr1:231241456:+ | COG2^ENSG00000135775.14 | chr1:230659464:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2259:16136:14382 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr1:0.55Mb]""]" | chr1:231241456-chr1:230659464 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GNLY--SEC22B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GNLY^ENSG00000115523.17 | chr2:85696682:+ | SEC22B^ENSG00000265808.4 | chr1:120157192:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1336:19267:15657 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:85696682-chr1:120157192 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GNAI3--AC126323.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GNAI3^ENSG00000065135.12 | chr1:109548838:+ | AC126323.1^ENSG00000166104.15 | chr15:62246572:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1441:34145:24891 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:109548838-chr15:62246572 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| GNAI3--AC126323.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GNAI3^ENSG00000065135.12 | chr1:109548838:+ | AC126323.1^ENSG00000166104.15 | chr15:62246254:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1441:34145:24891 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:109548838-chr15:62246254 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| GMFB--TIMMDC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GMFB^ENSG00000197045.13 | chr14:54488925:- | TIMMDC1^ENSG00000113845.10 | chr3:119513641:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2354:29153:9828 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr3]""]" | chr14:54488925-chr3:119513641 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GMDS--ELOVL5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GMDS^ENSG00000112699.11 | chr6:1624054:- | ELOVL5^ENSG00000012660.14 | chr6:53273344:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2188:34274:3901 | . | NO_LDAS | 0.0034 | GC | 1.371 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr6:51.02Mb]""]" | chr6:1624054-chr6:53273344 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GLYATL1--ZNF654 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GLYATL1^ENSG00000166840.13 | chr11:58907955:+ | ZNF654^ENSG00000175105.8 | chr3:88140560:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1122:28482:4601 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:58907955-chr3:88140560 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GLIS3--SPATA6L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GLIS3^ENSG00000107249.23 | chr9:4286038:- | SPATA6L^ENSG00000106686.16 | chr9:4666256:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1407:24631:1771 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr9:0.20Mb]""]" | chr9:4286038-chr9:4666256 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GLIS3--RFX3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GLIS3^ENSG00000107249.23 | chr9:4117768:- | RFX3^ENSG00000080298.15 | chr9:3346764:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:49313:13191 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr9:0.30Mb]""]" | chr9:4117768-chr9:3346764 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GJB4--NFIA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GJB4^ENSG00000189433.7 | chr1:34762041:+ | NFIA^ENSG00000162599.17 | chr1:61359147:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2127:12561:3172 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr1:26.10Mb]""]" | chr1:34762041-chr1:61359147 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GFOD2--ENKD1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GFOD2^ENSG00000141098.13 | chr16:67685457:- | ENKD1^ENSG00000124074.12 | chr16:67667093:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:2828:12938 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[7266]""]" | chr16:67685457-chr16:67667093 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| GFM1--AP000547.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GFM1^ENSG00000168827.15 | chr3:158646947:+ | AP000547.1^ENSG00000233995.1 | chr22:16574465:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1480:1121:3172 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr3--chr22]""]" | chr3:158646947-chr22:16574465 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GEN1--MFSD8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GEN1^ENSG00000178295.15 | chr2:17753967:+ | MFSD8^ENSG00000164073.11 | chr4:127933093:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2360:51538:6479 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:17753967-chr4:127933093 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GDF7--RUFY3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GDF7^ENSG00000143869.7 | chr2:20674474:+ | RUFY3^ENSG00000018189.13 | chr4:70704894:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1420:10190:9884 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:20674474-chr4:70704894 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GDAP1--MIR2052HG | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GDAP1^ENSG00000104381.14 | chr8:74363053:+ | MIR2052HG^ENSG00000254349.6 | chr8:74702379:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:31839:24513 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9899 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.08Mb]"",""NEIGHBORS[81768]""]" | chr8:74363053-chr8:74702379 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GCSH--CLYBL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GCSH^ENSG00000140905.11 | chr16:81096131:- | CLYBL^ENSG00000125246.15 | chr13:99772824:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1142:32268:9001 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr16--chr13]""]" | chr16:81096131-chr13:99772824 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GCOM2--AC084824.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GCOM2^ENSG00000227725.3 | chr4:68038685:+ | AC084824.1^ENSG00000257511.1 | chr12:32726636:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2486:34549:24975 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:68038685-chr12:32726636 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GATA2-AS1--ZFYVE21 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GATA2-AS1^ENSG00000244300.3 | chr3:128490069:+ | ZFYVE21^ENSG00000100711.14 | chr14:103726792:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:5911:23882 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chr14]""]" | chr3:128490069-chr14:103726792 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GATA2-AS1--UBE2J2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GATA2-AS1^ENSG00000244300.3 | chr3:128490069:+ | UBE2J2^ENSG00000160087.21 | chr1:1267992:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2426:41976:2247 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:128490069-chr1:1267992 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GARNL3--SCAI | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GARNL3^ENSG00000136895.19 | chr9:127357377:+ | SCAI^ENSG00000173611.18 | chr9:125056007:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:23757:29627 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr9:2.08Mb]""]" | chr9:127357377-chr9:125056007 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GAREM1--AC011825.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GAREM1^ENSG00000141441.16 | chr18:32287031:- | AC011825.2^ENSG00000263393.1 | chr18:32124154:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2317:7957:12658 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr18:0.00Mb]"",""NEIGHBORS[399]""]" | chr18:32287031-chr18:32124154 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GALNS--GMEB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GALNS^ENSG00000141012.13 | chr16:88856758:- | GMEB2^ENSG00000101216.11 | chr20:63619454:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:32559:20575 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr20]""]" | chr16:88856758-chr20:63619454 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GALK2--FGF7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GALK2^ENSG00000156958.15 | chr15:49217313:+ | FGF7^ENSG00000140285.12 | chr15:49483151:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1357:51692:25157 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7968 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr15:0.06Mb]"",""NEIGHBORS[55368]""]" | chr15:49217313-chr15:49483151 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 1 | ||||||
| GALK2--COPS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GALK2^ENSG00000156958.15 | chr15:49170358:+ | COPS2^ENSG00000166200.15 | chr15:49137437:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2177:24663:12280 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[5]""]" | chr15:49170358-chr15:49137437 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GACAT2--LCMT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GACAT2^ENSG00000265962.1 | chr18:8707539:- | LCMT2^ENSG00000168806.8 | chr15:43326756:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2129:8904:5974 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr18--chr15]""]" | chr18:8707539-chr15:43326756 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GABARAPL1--CNOT11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GABARAPL1^ENSG00000139112.11 | chr12:10221893:+ | CNOT11^ENSG00000158435.8 | chr2:101266771:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1153:47793:19104 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:10221893-chr2:101266771 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| G2E3-AS1--ADAP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | G2E3-AS1^ENSG00000257636.6 | chr14:30492717:- | ADAP2^ENSG00000184060.11 | chr17:30953288:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1211:20173:1476 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr14--chr17]""]" | chr14:30492717-chr17:30953288 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FYCO1--ZNF618 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FYCO1^ENSG00000163820.15 | chr3:45931071:- | ZNF618^ENSG00000157657.14 | chr9:114001996:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1486:11897:22761 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr9]""]" | chr3:45931071-chr9:114001996 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FXN--CBWD6 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | FXN^ENSG00000165060.15 | chr9:69043561:+ | CBWD6^ENSG00000215126.10 | chr9:41156439:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1450:35051:22985 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr9:27.84Mb]""]" | chr9:69043561-chr9:41156439 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FUT8--TMX4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FUT8^ENSG00000033170.17 | chr14:65455718:+ | TMX4^ENSG00000125827.9 | chr20:8010315:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2439:25610:2513 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr20]""]" | chr14:65455718-chr20:8010315 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FUT8--RIC8B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FUT8^ENSG00000033170.17 | chr14:65629606:+ | RIC8B^ENSG00000111785.21 | chr12:106815230:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:49856:21332 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr12]""]" | chr14:65629606-chr12:106815230 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FSIP1--ARHGEF5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FSIP1^ENSG00000150667.8 | chr15:39782628:- | ARHGEF5^ENSG00000050327.15 | chr7:144362676:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1390:38432:16960 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr15--chr7]""]" | chr15:39782628-chr7:144362676 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FP565260.3--ATP5F1E | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | FP565260.3^ENSG00000277117.5 | chr21:5036720:+ | ATP5F1E^ENSG00000124172.10 | chr20:59030429:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:39039:2822 | . | NO_LDAS | 0.0017 | GT | 1.9899 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr21--chr20]""]" | chr21:5036720-chr20:59030429 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FOXO1--LINC00598 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FOXO1^ENSG00000150907.10 | chr13:40665583:- | LINC00598^ENSG00000215483.11 | chr13:40470162:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1211:38570:6689 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8295 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]" | chr13:40665583-chr13:40470162 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| FOXO1--LINC00598 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FOXO1^ENSG00000150907.10 | chr13:40665583:- | LINC00598^ENSG00000215483.11 | chr13:40460406:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1476:4916:2794 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7465 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]" | chr13:40665583-chr13:40460406 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| FOXO1--LINC00598 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FOXO1^ENSG00000150907.10 | chr13:40665583:- | LINC00598^ENSG00000215483.11 | chr13:40097967:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:32082:13387 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]" | chr13:40665583-chr13:40097967 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| FOXN3--DCTD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FOXN3^ENSG00000053254.16 | chr14:89411934:- | DCTD^ENSG00000129187.15 | chr4:182915575:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2168:10926:21864 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr4]""]" | chr14:89411934-chr4:182915575 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FO393418.1--NRG1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FO393418.1^ENSG00000223695.1 | chr22:36396215:+ | NRG1^ENSG00000157168.20 | chr8:32763748:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1491:20853:4391 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr22--chr8]""]" | chr22:36396215-chr8:32763748 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FNTA--STAU2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FNTA^ENSG00000168522.13 | chr8:43064215:+ | STAU2^ENSG00000040341.18 | chr8:73617451:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1314:8774:21052 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr8:30.33Mb]""]" | chr8:43064215-chr8:73617451 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FNBP1L--RPAP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FNBP1L^ENSG00000137942.18 | chr1:93499583:+ | RPAP2^ENSG00000122484.9 | chr1:92323445:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1129:18393:21878 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:1.05Mb]""]" | chr1:93499583-chr1:92323445 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FNBP1L--PINX1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FNBP1L^ENSG00000137942.18 | chr1:93448305:+ | PINX1^ENSG00000254093.9 | chr8:10826244:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:29655:19945 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:93448305-chr8:10826244 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FNBP1L--DNTTIP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FNBP1L^ENSG00000137942.18 | chr1:93499583:+ | DNTTIP2^ENSG00000067334.14 | chr1:93873214:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1124:40576:15040 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:0.31Mb]""]" | chr1:93499583-chr1:93873214 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FGGY--C11orf80 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FGGY^ENSG00000172456.18 | chr1:59378837:+ | C11orf80^ENSG00000173715.18 | chr11:66815758:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1243:18474:7782 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:59378837-chr11:66815758 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| FGFR1OP2--NELFCD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FGFR1OP2^ENSG00000111790.14 | chr12:26957743:+ | NELFCD^ENSG00000101158.15 | chr20:58991881:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1296:18256:28394 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:26957743-chr20:58991881 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FGF7P3--ZNF23 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FGF7P3^ENSG00000204837.5 | chr9:39830013:- | ZNF23^ENSG00000167377.18 | chr16:71449882:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2311:4244:20715 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr16]""]" | chr9:39830013-chr16:71449882 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FGD4--INTS13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FGD4^ENSG00000139132.15 | chr12:32399959:+ | INTS13^ENSG00000064102.15 | chr12:26928905:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:2529:3844 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:5.46Mb]""]" | chr12:32399959-chr12:26928905 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FEZ1--C11orf98 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FEZ1^ENSG00000149557.14 | chr11:125463484:- | C11orf98^ENSG00000278615.5 | chr11:62664973:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2221:33044:7011 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr11:62.78Mb]""]" | chr11:125463484-chr11:62664973 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FER1L5--RPS12P5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FER1L5^ENSG00000249715.13 | chr2:96647886:+ | RPS12P5^ENSG00000226216.1 | chr3:29390908:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2329:32608:10514 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:96647886-chr3:29390908 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FEN1--AC006122.1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | FEN1^ENSG00000168496.4 | chr11:61796333:+ | AC006122.1^ENSG00000213970.4 | chr12:4324623:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:6364:21276 | . | YES_LDAS | 0.0008 | GT | 1.8892 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr11--chr12]""]" | chr11:61796333-chr12:4324623 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FEM1C--DCP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FEM1C^ENSG00000145780.8 | chr5:115542950:- | DCP2^ENSG00000172795.17 | chr5:112985835:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2206:50300:23364 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr5:2.50Mb]""]" | chr5:115542950-chr5:112985835 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FEM1C--CCDC112 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FEM1C^ENSG00000145780.8 | chr5:115542950:- | CCDC112^ENSG00000164221.13 | chr5:115284908:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2391:15004:19678 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.6895 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.22Mb]""]" | chr5:115542950-chr5:115284908 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FDPSP5--GAL3ST1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FDPSP5^ENSG00000215035.2 | chrX:44476198:- | GAL3ST1^ENSG00000128242.13 | chr22:30557401:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1230:51385:27623 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chrX--chr22]""]" | chrX:44476198-chr22:30557401 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FCN3--CD164L2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FCN3^ENSG00000142748.13 | chr1:27370596:- | CD164L2^ENSG00000174950.11 | chr1:27382399:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2343:6979:24751 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4352]""]" | chr1:27370596-chr1:27382399 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FCHO1--RNF167 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FCHO1^ENSG00000130475.14 | chr19:17783101:+ | RNF167^ENSG00000108523.16 | chr17:4940749:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2192:27293:17535 | . | YES_LDAS | 0.0034 | GT | 1.1589 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr19--chr17]""]" | chr19:17783101-chr17:4940749 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FBXO24--GZF1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FBXO24^ENSG00000106336.13 | chr7:100584777:+ | GZF1^ENSG00000125812.16 | chr20:23364363:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:50665:16568 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr20]""]" | chr7:100584777-chr20:23364363 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FBN1--AC084757.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FBN1^ENSG00000166147.14 | chr15:48610728:- | AC084757.2^ENSG00000259469.1 | chr15:48729540:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:3055:23167 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr15:0.08Mb]"",""LOCAL_REARRANGEMENT:-:[83359]""]" | chr15:48610728-chr15:48729540 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FARS2--AC093249.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FARS2^ENSG00000145982.13 | chr6:5368846:+ | AC093249.2^ENSG00000260167.1 | chr16:30585922:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:11250:28590 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:5368846-chr16:30585922 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FAR2P1--DTNB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAR2P1^ENSG00000180178.11 | chr2:130028309:- | DTNB^ENSG00000138101.19 | chr2:25628384:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1324:43448:16736 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr2:104.34Mb]""]" | chr2:130028309-chr2:25628384 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FANCD2--UBE3D | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FANCD2^ENSG00000144554.12 | chr3:10032423:+ | UBE3D^ENSG00000118420.17 | chr6:83024038:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1377:47598:8398 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr3--chr6]""]" | chr3:10032423-chr6:83024038 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| FANCC--AOPEP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FANCC^ENSG00000158169.13 | chr9:95135346:- | AOPEP^ENSG00000148120.17 | chr9:94792765:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1231:36790:23111 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr9:0.01Mb]"",""LOCAL_INVERSION:-:+:[11895]""]" | chr9:95135346-chr9:94792765 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM86DP--LINC02014 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM86DP^ENSG00000244026.6 | chr3:75426450:- | LINC02014^ENSG00000248243.1 | chr3:130090818:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1430:24437:8721 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:54.65Mb]""]" | chr3:75426450-chr3:130090818 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| FAM219B--BEND7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM219B^ENSG00000178761.15 | chr15:74900217:- | BEND7^ENSG00000165626.17 | chr10:13452658:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1185:45155:5680 | . | YES_LDAS | 0.0034 | GC | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr10]""]" | chr15:74900217-chr10:13452658 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM20C--PRKAR1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM20C^ENSG00000177706.9 | chr7:208976:+ | PRKAR1B^ENSG00000188191.15 | chr7:711527:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2345:38263:17254 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5656 | "[""Klijn_CellLines"",""INTRACHROMOSOMAL[chr7:0.29Mb]""]" | chr7:208976-chr7:711527 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM20C--AC091390.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM20C^ENSG00000177706.9 | chr7:197583:+ | AC091390.3^ENSG00000239969.5 | chr7:102366018:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2302:43230:4475 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr7:102.10Mb]""]" | chr7:197583-chr7:102366018 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM177A1--PRORP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM177A1^ENSG00000151327.13 | chr14:35102729:+ | PRORP^ENSG00000100890.16 | chr14:35122952:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1397:49079:3788 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr14:0.01Mb]"",""NEIGHBORS[8716]""]" | chr14:35102729-chr14:35122952 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| FAM172A--DEPDC1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM172A^ENSG00000113391.19 | chr5:94050731:- | DEPDC1B^ENSG00000035499.13 | chr5:60687227:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:9883:10052 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr5:32.92Mb]""]" | chr5:94050731-chr5:60687227 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM149B1--AC008267.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM149B1^ENSG00000138286.15 | chr10:73168386:+ | AC008267.3^ENSG00000234500.1 | chr7:66520992:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1339:30051:26404 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:73168386-chr7:66520992 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FAM13A--LINC01997 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM13A^ENSG00000138640.15 | chr4:88938088:- | LINC01997^ENSG00000241383.2 | chr3:169005995:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1283:27074:27749 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr3]""]" | chr4:88938088-chr3:169005995 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM135A--BCKDHB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM135A^ENSG00000082269.17 | chr6:70502791:+ | BCKDHB^ENSG00000083123.15 | chr6:80273135:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2357:32721:29431 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr6:9.55Mb]""]" | chr6:70502791-chr6:80273135 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM126A--SEC11A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM126A^ENSG00000122591.13 | chr7:22938280:- | SEC11A^ENSG00000140612.14 | chr15:84680832:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1305:50608:24316 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr15]""]" | chr7:22938280-chr15:84680832 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FAM114A2--FBXO9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM114A2^ENSG00000055147.19 | chr5:154038857:- | FBXO9^ENSG00000112146.17 | chr6:53076486:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2217:42979:18221 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr5--chr6]""]" | chr5:154038857-chr6:53076486 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM107B--STAM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM107B^ENSG00000065809.14 | chr10:14604240:- | STAM^ENSG00000136738.15 | chr10:17700191:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2325:49047:24358 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr10:2.87Mb]""]" | chr10:14604240-chr10:17700191 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAH--ZFAND6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAH^ENSG00000103876.13 | chr15:80168316:+ | ZFAND6^ENSG00000086666.19 | chr15:80120328:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1437:3039:28884 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr15:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[14097]""]" | chr15:80168316-chr15:80120328 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EXT1--FAM210B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | EXT1^ENSG00000182197.12 | chr8:118110541:- | FAM210B^ENSG00000124098.10 | chr20:56365087:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1183:32478:20183 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr8--chr20]""]" | chr8:118110541-chr20:56365087 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| EXOC4--LRGUK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EXOC4^ENSG00000131558.15 | chr7:134007835:+ | LRGUK^ENSG00000155530.3 | chr7:134191655:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:39096:1434 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9219 | "[""Klijn_CellLines"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[60710]""]" | chr7:134007835-chr7:134191655 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EXOC4--LRGUK | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EXOC4^ENSG00000131558.15 | chr7:134007835:+ | LRGUK^ENSG00000155530.3 | chr7:134158022:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:49880:7362 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9086 | "[""Klijn_CellLines"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[60710]""]" | chr7:134007835-chr7:134158022 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| EXOC2--CCDC66 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EXOC2^ENSG00000112685.14 | chr6:572520:- | CCDC66^ENSG00000180376.17 | chr3:56618172:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2354:46037:20659 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr6--chr3]""]" | chr6:572520-chr3:56618172 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EXOC1--DNTTIP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EXOC1^ENSG00000090989.18 | chr4:55899884:+ | DNTTIP2^ENSG00000067334.14 | chr1:93873214:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2422:2149:13527 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:55899884-chr1:93873214 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EVI5L--IPO11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EVI5L^ENSG00000142459.8 | chr19:7863067:+ | IPO11^ENSG00000086200.17 | chr5:62403995:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:2343:18151 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:7863067-chr5:62403995 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ERVK13-1--TOR1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ERVK13-1^ENSG00000260565.7 | chr16:2682140:- | TOR1B^ENSG00000136816.16 | chr9:129808905:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2434:20052:26741 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr16--chr9]""]" | chr16:2682140-chr9:129808905 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ERLIN1--LINC01297 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ERLIN1^ENSG00000107566.14 | chr10:100167348:- | LINC01297^ENSG00000274827.4 | chr14:19384391:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1293:25278:22173 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr10--chr14]""]" | chr10:100167348-chr14:19384391 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ERH--CA13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ERH^ENSG00000100632.11 | chr14:69386963:- | CA13^ENSG00000185015.8 | chr8:85281230:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1230:29307:18557 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr8]""]" | chr14:69386963-chr8:85281230 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ERFE--RECQL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ERFE^ENSG00000178752.16 | chr2:238167725:+ | RECQL^ENSG00000004700.16 | chr12:21483574:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:1728:7109 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr2--chr12]""]" | chr2:238167725-chr12:21483574 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| EPHA1--AC008132.1 | 1 | 0 | 0.06 | 0.0 | INCL_NON_REF_SPLICE | EPHA1^ENSG00000146904.9 | chr7:143390635:- | AC008132.1^ENSG00000161103.11 | chr22:18847398:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:1825:1645 | . | NO_LDAS | 0.0002 | GT | 1.8256 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr7--chr22]""]" | chr7:143390635-chr22:18847398 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| EPB41L5--PTPN4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EPB41L5^ENSG00000115109.14 | chr2:120042110:+ | PTPN4^ENSG00000088179.9 | chr2:119920069:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:47461:28618 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28178]""]" | chr2:120042110-chr2:119920069 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EPB41L5--PTPN4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EPB41L5^ENSG00000115109.14 | chr2:120019264:+ | PTPN4^ENSG00000088179.9 | chr2:119932424:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:14017:23826 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28178]""]" | chr2:120019264-chr2:119932424 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EML1--GFY | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EML1^ENSG00000066629.18 | chr14:99920877:+ | GFY^ENSG00000261949.7 | chr19:49423870:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1270:33902:16484 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr14--chr19]""]" | chr14:99920877-chr19:49423870 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ELP2--CMAS | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ELP2^ENSG00000134759.14 | chr18:36141201:+ | CMAS^ENSG00000111726.13 | chr12:22060832:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:7949:7039 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr18--chr12]""]" | chr18:36141201-chr12:22060832 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ELOVL2-AS1--SYCP2L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ELOVL2-AS1^ENSG00000230314.7 | chr6:11047999:+ | SYCP2L^ENSG00000153157.13 | chr6:10956136:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:42308:3550 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr6:0.06Mb]"",""LOCAL_REARRANGEMENT:+:[64162]""]" | chr6:11047999-chr6:10956136 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ELOC--MKRN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ELOC^ENSG00000154582.17 | chr8:73972077:- | MKRN3^ENSG00000179455.10 | chr15:23566808:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1218:17172:12812 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr8--chr15]""]" | chr8:73972077-chr15:23566808 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ELOA--ZNF165 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ELOA^ENSG00000011007.12 | chr1:23749077:+ | ZNF165^ENSG00000197279.4 | chr6:28085616:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1286:19769:18740 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:23749077-chr6:28085616 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ELAC1--SMAD4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ELAC1^ENSG00000141642.9 | chr18:50974561:+ | SMAD4^ENSG00000141646.14 | chr18:51046920:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2365:22997:26937 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr18:0.04Mb]"",""NEIGHBORS[40273]""]" | chr18:50974561-chr18:51046920 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| EIF4E2--AC009075.2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | EIF4E2^ENSG00000135930.14 | chr2:232558018:+ | AC009075.2^ENSG00000261774.1 | chr16:72278298:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:12431:6591 | . | NO_LDAS | 0.0008 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:232558018-chr16:72278298 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| EIF2AK3--SAMD3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EIF2AK3^ENSG00000172071.14 | chr2:88613724:- | SAMD3^ENSG00000164483.17 | chr6:130184623:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:5417:15517 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr2--chr6]""]" | chr2:88613724-chr6:130184623 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EFR3B--H2AC4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EFR3B^ENSG00000084710.14 | chr2:25146569:+ | H2AC4^ENSG00000278463.2 | chr6:26033576:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1365:2990:20533 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr2--chr6]""]" | chr2:25146569-chr6:26033576 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| EFCAB2--KIF26B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EFCAB2^ENSG00000203666.12 | chr1:245083688:+ | KIF26B^ENSG00000162849.16 | chr1:245366834:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2455:21597:19328 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:0.03Mb]"",""NEIGHBORS[27821]""]" | chr1:245083688-chr1:245366834 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| EEF1AKMT3--TSFM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EEF1AKMT3^ENSG00000123427.17 | chr12:57773128:+ | TSFM^ENSG00000123297.20 | chr12:57783110:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:49613:23153 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr12:0.00Mb]"",""NEIGHBORS[220]""]" | chr12:57773128-chr12:57783110 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| EEF1AKMT2--AL121769.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EEF1AKMT2^ENSG00000203791.15 | chr10:124789043:- | AL121769.1^ENSG00000242163.1 | chr14:81332990:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1280:33837:5022 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr14]""]" | chr10:124789043-chr14:81332990 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| EEF1AKMT1--INTS4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EEF1AKMT1^ENSG00000150456.11 | chr13:20757455:- | INTS4^ENSG00000149262.17 | chr11:77961138:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1229:28474:14116 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr13--chr11]""]" | chr13:20757455-chr11:77961138 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EEA1--TMEM258 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EEA1^ENSG00000102189.17 | chr12:92832512:- | TMEM258^ENSG00000134825.16 | chr11:61790602:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:39241:6843 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr11]""]" | chr12:92832512-chr11:61790602 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EDRF1-DT--FRA10AC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EDRF1-DT^ENSG00000224023.10 | chr10:125719422:- | FRA10AC1^ENSG00000148690.12 | chr10:93700106:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2155:30205:4783 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr10:32.00Mb]""]" | chr10:125719422-chr10:93700106 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EAF1--PPP2R5E | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EAF1^ENSG00000144597.14 | chr3:15432195:+ | PPP2R5E^ENSG00000154001.14 | chr14:63374243:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:49758:2724 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr3--chr14]""]" | chr3:15432195-chr14:63374243 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DYNC1I2--ICE2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | DYNC1I2^ENSG00000077380.16 | chr2:171692894:+ | ICE2^ENSG00000128915.12 | chr15:60478069:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1122:27859:23588 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr2--chr15]""]" | chr2:171692894-chr15:60478069 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DVL2--POLD4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DVL2^ENSG00000004975.12 | chr17:7230316:- | POLD4^ENSG00000175482.9 | chr11:67352709:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2141:7707:12588 | . | NO_LDAS | 0.0034 | GC | 1.5656 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:7230316-chr11:67352709 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DUS3L--AP001324.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DUS3L^ENSG00000141994.16 | chr19:5788357:- | AP001324.3^ENSG00000279353.1 | chr11:74699256:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:49831:25381 | . | NO_LDAS | 0.0034 | GT | 1.4256 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:5788357-chr11:74699256 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DTX4--DTX2P1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DTX4^ENSG00000110042.8 | chr11:59172806:+ | DTX2P1^ENSG00000186704.9 | chr7:76980621:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1103:33506:5484 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chr7]""]" | chr11:59172806-chr7:76980621 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DTX2P1--TNFRSF11A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DTX2P1^ENSG00000186704.9 | chr7:77002321:+ | TNFRSF11A^ENSG00000141655.17 | chr18:62389144:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2432:4883:28744 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr7--chr18]""]" | chr7:77002321-chr18:62389144 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DTWD2--TNFAIP8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DTWD2^ENSG00000169570.10 | chr5:118988294:- | TNFAIP8^ENSG00000145779.8 | chr5:119392816:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:8588:20561 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr5:0.28Mb]""]" | chr5:118988294-chr5:119392816 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DTWD2--TAB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DTWD2^ENSG00000169570.10 | chr5:118839037:- | TAB1^ENSG00000100324.14 | chr22:39426703:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:44265:17815 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr22]""]" | chr5:118839037-chr22:39426703 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DTWD1--SEC62 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DTWD1^ENSG00000104047.15 | chr15:49625431:+ | SEC62^ENSG00000008952.17 | chr3:169982707:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:14543:14144 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr3]""]" | chr15:49625431-chr3:169982707 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DTNB--DNMT3A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DTNB^ENSG00000138101.19 | chr2:25652594:- | DNMT3A^ENSG00000119772.17 | chr2:25282711:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2445:19486:24499 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr2:0.03Mb]"",""NEIGHBORS[34608]""]" | chr2:25652594-chr2:25282711 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DTD2--G2E3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DTD2^ENSG00000129480.13 | chr14:31457283:- | G2E3^ENSG00000092140.16 | chr14:30601770:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:3476:15993 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr14:0.83Mb]""]" | chr14:31457283-chr14:30601770 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DSTN--AC073840.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DSTN^ENSG00000125868.16 | chr20:17601042:+ | AC073840.1^ENSG00000286035.1 | chr4:83084051:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2161:2707:28142 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr20--chr4]""]" | chr20:17601042-chr4:83084051 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DRC3--YRDC | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DRC3^ENSG00000171962.18 | chr17:17993823:+ | YRDC^ENSG00000196449.4 | chr1:37808148:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:51287:28156 | . | NO_LDAS | 0.0034 | GC | 1.6402 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:17993823-chr1:37808148 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DRAM1--MREG | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DRAM1^ENSG00000136048.14 | chr12:101890221:+ | MREG^ENSG00000118242.16 | chr2:215996465:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:50244:15979 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:101890221-chr2:215996465 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DRAM1--AC079907.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DRAM1^ENSG00000136048.14 | chr12:101901433:+ | AC079907.1^ENSG00000257222.1 | chr12:102074408:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1412:19777:2752 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr12:0.05Mb]"",""NEIGHBORS[51225]""]" | chr12:101901433-chr12:102074408 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DPM1--CERNA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DPM1^ENSG00000000419.13 | chr20:50945737:- | CERNA1^ENSG00000259577.2 | chr15:52205277:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2463:20327:9113 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr20--chr15]""]" | chr20:50945737-chr15:52205277 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DPH6--TRIM67 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DPH6^ENSG00000134146.12 | chr15:35373517:- | TRIM67^ENSG00000119283.15 | chr1:231197446:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2204:7715:14760 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:35373517-chr1:231197446 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DPH5--LDHAL6EP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DPH5^ENSG00000117543.21 | chr1:100992637:- | LDHAL6EP^ENSG00000270098.1 | chr4:71436985:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2426:34582:11719 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr1--chr4]""]" | chr1:100992637-chr4:71436985 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DOK1--CRYBG3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DOK1^ENSG00000115325.14 | chr2:74555324:+ | CRYBG3^ENSG00000080200.10 | chr3:97872545:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2281:23280:13387 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:74555324-chr3:97872545 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DNTTIP2--FNBP1L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNTTIP2^ENSG00000067334.14 | chr1:93879077:- | FNBP1L^ENSG00000137942.18 | chr1:93546842:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1239:48132:24457 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr1:0.31Mb]""]" | chr1:93879077-chr1:93546842 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DNM1L--CPNE2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DNM1L^ENSG00000087470.19 | chr12:32707387:+ | CPNE2^ENSG00000140848.17 | chr16:57110900:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:32098:18207 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr12--chr16]""]" | chr12:32707387-chr16:57110900 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DNM1L--AMN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNM1L^ENSG00000087470.19 | chr12:32701562:+ | AMN1^ENSG00000151743.11 | chr12:31689118:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1438:38457:3690 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr12:0.95Mb]""]" | chr12:32701562-chr12:31689118 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DNAL4--DCTD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNAL4^ENSG00000100246.13 | chr22:38794068:- | DCTD^ENSG00000129187.15 | chr4:182915575:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1484:33708:20071 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr4]""]" | chr22:38794068-chr4:182915575 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DNAJC22--SDHAP1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | DNAJC22^ENSG00000178401.16 | chr12:49351498:+ | SDHAP1^ENSG00000185485.14 | chr3:195960086:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:51595:16610 | . | YES_LDAS | 0.0017 | GT | 1.7968 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:49351498-chr3:195960086 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DNAJC2--PSMC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNAJC2^ENSG00000105821.15 | chr7:103319609:- | PSMC2^ENSG00000161057.13 | chr7:103366076:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1266:47898:16960 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.02Mb]"",""NEIGHBORS_OVERLAP:-:+:[16260]""]" | chr7:103319609-chr7:103366076 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DNAJC19--DNAJC19P5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DNAJC19^ENSG00000205981.8 | chr3:180985926:- | DNAJC19P5^ENSG00000225808.1 | chr2:177229255:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1366:41296:25059 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr2]""]" | chr3:180985926-chr2:177229255 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DNAJC17--RAD51 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNAJC17^ENSG00000104129.10 | chr15:40773727:- | RAD51^ENSG00000051180.17 | chr15:40709025:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2128:44524:10332 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr15:0.03Mb]"",""LOCAL_INVERSION:-:+:[32821]""]" | chr15:40773727-chr15:40709025 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DNAJB11--AC022400.7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DNAJB11^ENSG00000090520.12 | chr3:186585483:+ | AC022400.7^ENSG00000279689.1 | chr10:73769433:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1312:36685:13933 | . | YES_LDAS | 0.0034 | GT | 0.9183 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:186585483-chr10:73769433 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DNAJA1--SMDT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNAJA1^ENSG00000086061.16 | chr9:33037115:+ | SMDT1^ENSG00000183172.9 | chr22:42083119:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:32187:17745 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr9--chr22]""]" | chr9:33037115-chr22:42083119 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DNAJA1--BHLHE41 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DNAJA1^ENSG00000086061.16 | chr9:33025387:+ | BHLHE41^ENSG00000123095.6 | chr12:26124785:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2207:2076:21332 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr12]""]" | chr9:33025387-chr12:26124785 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DNAJA1--ARMC5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNAJA1^ENSG00000086061.16 | chr9:33026990:+ | ARMC5^ENSG00000140691.18 | chr16:31461922:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1279:46547:2597 | . | YES_LDAS | 0.0034 | GT | 0.9968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr16]""]" | chr9:33026990-chr16:31461922 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DMTF1--DCDC2B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DMTF1^ENSG00000135164.19 | chr7:87171089:+ | DCDC2B^ENSG00000222046.2 | chr1:32215503:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2352:47598:8707 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:87171089-chr1:32215503 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DMBX1--SEMA7A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DMBX1^ENSG00000197587.11 | chr1:46512649:+ | SEMA7A^ENSG00000138623.10 | chr15:74411680:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:3427:5400 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:46512649-chr15:74411680 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DMAC2L--UBE2Q2P1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | DMAC2L^ENSG00000125375.17 | chr14:50322719:+ | UBE2Q2P1^ENSG00000189136.9 | chr15:84526876:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2441:16630:27511 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr15]""]" | chr14:50322719-chr15:84526876 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DHX29--PTCD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DHX29^ENSG00000067248.10 | chr5:55274614:- | PTCD2^ENSG00000049883.15 | chr5:72358203:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1115:33570:21290 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr5:17.01Mb]""]" | chr5:55274614-chr5:72358203 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DHTKD1--AC008805.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DHTKD1^ENSG00000181192.12 | chr10:12091684:+ | AC008805.2^ENSG00000267555.1 | chr19:32831308:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2452:9753:24653 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr10--chr19]""]" | chr10:12091684-chr19:32831308 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DHFR--MRPL1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | DHFR^ENSG00000228716.7 | chr5:80654008:- | MRPL1^ENSG00000169288.18 | chr4:77871744:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:30351:23504 | . | YES_LDAS | 0.0017 | GT | 1.9899 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr5--chr4]""]" | chr5:80654008-chr4:77871744 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DHDDS--AL121970.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DHDDS^ENSG00000117682.17 | chr1:26442873:+ | AL121970.1^ENSG00000236389.1 | chr6:134706498:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1459:39751:21654 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:26442873-chr6:134706498 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DESI2--FLVCR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DESI2^ENSG00000121644.19 | chr1:244653355:+ | FLVCR1^ENSG00000162769.13 | chr1:212863725:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:25213:24723 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:31.75Mb]""]" | chr1:244653355-chr1:212863725 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DERL1--NAA20 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DERL1^ENSG00000136986.10 | chr8:123024986:- | NAA20^ENSG00000173418.12 | chr20:20025677:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2124:4147:12756 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr8--chr20]""]" | chr8:123024986-chr20:20025677 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DEPDC1B--PDE4D | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DEPDC1B^ENSG00000035499.13 | chr5:60638750:- | PDE4D^ENSG00000113448.19 | chr5:60185687:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:42227:15433 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""Klijn_CellLines"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.07Mb]"",""NEIGHBORS[74792]""]" | chr5:60638750-chr5:60185687 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DENND5B--ARNTL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DENND5B^ENSG00000170456.16 | chr12:31590706:- | ARNTL2^ENSG00000029153.14 | chr12:27368262:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2364:43990:23672 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr12:3.96Mb]""]" | chr12:31590706-chr12:27368262 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DENND4A--AQP7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DENND4A^ENSG00000174485.16 | chr15:65676445:- | AQP7^ENSG00000165269.13 | chr9:33383687:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:16581:16750 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr9]""]" | chr15:65676445-chr9:33383687 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DENND2B--DZIP1L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DENND2B^ENSG00000166444.19 | chr11:8713998:- | DZIP1L^ENSG00000158163.15 | chr3:138068367:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:25804:11173 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:8713998-chr3:138068367 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DENND11--NDUFB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DENND11^ENSG00000257093.7 | chr7:141685478:- | NDUFB2^ENSG00000090266.13 | chr7:140702866:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1362:23474:19160 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr7:0.93Mb]""]" | chr7:141685478-chr7:140702866 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DENND10--METTL16 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DENND10^ENSG00000119979.18 | chr10:119108164:+ | METTL16^ENSG00000127804.13 | chr17:2420904:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1105:40738:15937 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr10--chr17]""]" | chr10:119108164-chr17:2420904 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DEGS1--NVL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DEGS1^ENSG00000143753.13 | chr1:224183418:+ | NVL^ENSG00000143748.18 | chr1:224250318:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1192:9891:26068 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:0.03Mb]"",""LOCAL_INVERSION:+:-:[33893]""]" | chr1:224183418-chr1:224250318 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DEGS1--GPR137B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DEGS1^ENSG00000143753.13 | chr1:224183418:+ | GPR137B^ENSG00000077585.14 | chr1:236178414:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2275:2173:15222 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr1:11.95Mb]""]" | chr1:224183418-chr1:236178414 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DEGS1--ATF3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DEGS1^ENSG00000143753.13 | chr1:224183418:+ | ATF3^ENSG00000162772.17 | chr1:212615018:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1109:20837:6185 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr1:11.55Mb]""]" | chr1:224183418-chr1:212615018 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DEF8--METTL3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DEF8^ENSG00000140995.17 | chr16:89955266:+ | METTL3^ENSG00000165819.12 | chr14:21501129:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1166:14340:1490 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr16--chr14]""]" | chr16:89955266-chr14:21501129 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDX59--MCAT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DDX59^ENSG00000118197.14 | chr1:200648439:- | MCAT^ENSG00000100294.13 | chr22:43141249:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1270:20125:5008 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr1--chr22]""]" | chr1:200648439-chr22:43141249 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDX59--ABHD15 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DDX59^ENSG00000118197.14 | chr1:200669876:- | ABHD15^ENSG00000168792.5 | chr17:29566839:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1210:46514:10164 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:200669876-chr17:29566839 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDX55--AC068620.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DDX55^ENSG00000111364.16 | chr12:123606159:+ | AC068620.1^ENSG00000269921.1 | chr4:56387694:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1290:36798:8525 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:123606159-chr4:56387694 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DDX27--AC008481.1 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | DDX27^ENSG00000124228.15 | chr20:49233342:+ | AC008481.1^ENSG00000213303.3 | chr19:11523731:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2181:8904:20799 | . | YES_LDAS | 0.0007 | AT | 1.5628 | AC | 1.9086 | "[""INTERCHROMOSOMAL[chr20--chr19]""]" | chr20:49233342-chr19:11523731 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDTL--SPAG8 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | DDTL^ENSG00000099974.8 | chr22:23967561:+ | SPAG8^ENSG00000137098.14 | chr9:35808306:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2204:46725:2065 | . | YES_LDAS | 0.0017 | GT | 1.7056 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr22--chr9]""]" | chr22:23967561-chr9:35808306 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDTL--MRPL45P2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | DDTL^ENSG00000099974.8 | chr22:23967561:+ | MRPL45P2^ENSG00000228782.7 | chr17:47456793:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2212:13426:11369 | . | YES_LDAS | 0.0017 | GT | 1.7056 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr22--chr17]""]" | chr22:23967561-chr17:47456793 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDT--SPAG8 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | DDT^ENSG00000099977.14 | chr22:23973768:- | SPAG8^ENSG00000137098.14 | chr9:35808306:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2204:46725:2065 | . | YES_LDAS | 0.0017 | GT | 1.7056 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr22--chr9]""]" | chr22:23973768-chr9:35808306 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDT--MRPL45P2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | DDT^ENSG00000099977.14 | chr22:23973768:- | MRPL45P2^ENSG00000228782.7 | chr17:47456793:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2212:13426:11369 | . | YES_LDAS | 0.0017 | GT | 1.7056 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr22--chr17]""]" | chr22:23973768-chr17:47456793 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDR2--RGS5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DDR2^ENSG00000162733.19 | chr1:162655374:+ | RGS5^ENSG00000143248.13 | chr1:163168368:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1292:21824:14592 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr1:0.32Mb]""]" | chr1:162655374-chr1:163168368 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDIT4L--KIF14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DDIT4L^ENSG00000145358.6 | chr4:100188121:- | KIF14^ENSG00000118193.12 | chr1:200618179:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1412:23070:2766 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:100188121-chr1:200618179 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDAH1--BCL10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DDAH1^ENSG00000153904.21 | chr1:85464743:- | BCL10^ENSG00000142867.14 | chr1:85270906:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1478:48610:18277 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""NEIGHBORS[41853]""]" | chr1:85464743-chr1:85270906 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DCTD--TRPM6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DCTD^ENSG00000129187.15 | chr4:182891403:- | TRPM6^ENSG00000119121.22 | chr9:74782476:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:1396:10626 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr9]""]" | chr4:182891403-chr9:74782476 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DCAKD--LINC02862 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | DCAKD^ENSG00000172992.12 | chr17:45013487:- | LINC02862^ENSG00000237571.1 | chr2:215277608:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:8087:22271 | . | NO_LDAS | 0.0011 | GT | 1.9899 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:45013487-chr2:215277608 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DCAKD--ELP4 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | DCAKD^ENSG00000172992.12 | chr17:45013487:- | ELP4^ENSG00000109911.19 | chr11:31580683:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:8087:22271 | . | NO_LDAS | 0.0011 | GT | 1.9899 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:45013487-chr11:31580683 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DCAKD--CCDC144NL | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | DCAKD^ENSG00000172992.12 | chr17:45013487:- | CCDC144NL^ENSG00000205212.5 | chr17:20837111:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:8087:22271 | . | NO_LDAS | 0.0011 | GT | 1.9899 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr17:24.13Mb]""]" | chr17:45013487-chr17:20837111 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DCAF11--PSTPIP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DCAF11^ENSG00000100897.18 | chr14:24118458:+ | PSTPIP2^ENSG00000152229.18 | chr18:45992202:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1257:33198:8763 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr14--chr18]""]" | chr14:24118458-chr18:45992202 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DAPK1--FPR2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | DAPK1^ENSG00000196730.13 | chr9:87647403:+ | FPR2^ENSG00000171049.9 | chr19:51769618:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:11889:8987 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr19]""]" | chr9:87647403-chr19:51769618 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DAPK1--FPR1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | DAPK1^ENSG00000196730.13 | chr9:87647403:+ | FPR1^ENSG00000171051.9 | chr19:51746038:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:11889:8987 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr19]""]" | chr9:87647403-chr19:51746038 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DAPK1--AC139491.6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DAPK1^ENSG00000196730.13 | chr9:87640847:+ | AC139491.6^ENSG00000283559.2 | chr5:176155439:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2490:39541:29249 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr9--chr5]""]" | chr9:87640847-chr5:176155439 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CYTOR--MRPS9 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | CYTOR^ENSG00000222041.11 | chr2:87455645:+ | MRPS9^ENSG00000135972.9 | chr2:105071313:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2283:9414:21094 | . | YES_LDAS | 0.0017 | GT | 1.7968 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr2:17.40Mb]""]" | chr2:87455645-chr2:105071313 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CYP2C23P--CLCN2 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | CYP2C23P^ENSG00000283232.1 | chr10:100122527:- | CLCN2^ENSG00000114859.16 | chr3:184355460:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:44702:10921 | . | NO_LDAS | 0.0011 | GT | 1.6895 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:100122527-chr3:184355460 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CYP24A1--ATAD1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CYP24A1^ENSG00000019186.10 | chr20:54157169:- | ATAD1^ENSG00000138138.14 | chr10:87753498:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2196:21217:19202 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr20--chr10]""]" | chr20:54157169-chr10:87753498 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CYP20A1--AC084838.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CYP20A1^ENSG00000119004.16 | chr2:203272748:+ | AC084838.1^ENSG00000255076.2 | chr8:14879300:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2427:46086:16343 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr2--chr8]""]" | chr2:203272748-chr8:14879300 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CYB5D1--MVD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CYB5D1^ENSG00000182224.12 | chr17:7858824:+ | MVD^ENSG00000167508.12 | chr16:88663115:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2309:18944:20589 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr17--chr16]""]" | chr17:7858824-chr16:88663115 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CYB561D2--EIF1B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CYB561D2^ENSG00000114395.11 | chr3:50351560:+ | EIF1B^ENSG00000114784.4 | chr3:40309871:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:14769:21206 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr3:10.05Mb]""]" | chr3:50351560-chr3:40309871 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CYB561A3--LINC00279 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CYB561A3^ENSG00000162144.10 | chr11:61356533:- | LINC00279^ENSG00000286217.2 | chrY:8633049:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1326:43950:14214 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr11--chrY]""]" | chr11:61356533-chrY:8633049 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CXorf56--NDUFA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CXorf56^ENSG00000018610.15 | chrX:119539672:- | NDUFA1^ENSG00000125356.7 | chrX:119876514:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1207:8661:24807 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chrX:0.31Mb]""]" | chrX:119539672-chrX:119876514 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CUTC--ELF4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CUTC^ENSG00000119929.13 | chr10:99736317:+ | ELF4^ENSG00000102034.17 | chrX:130081312:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:38918:12644 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr10--chrX]""]" | chr10:99736317-chrX:130081312 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CUL2--FAM221B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CUL2^ENSG00000108094.16 | chr10:35062960:- | FAM221B^ENSG00000204930.10 | chr9:35818016:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:51085:21332 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr9]""]" | chr10:35062960-chr9:35818016 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CU633906.5--RAB41 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CU633906.5^ENSG00000288187.1 | chr21:6216499:- | RAB41^ENSG00000147127.8 | chrX:70282261:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2290:45576:6353 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr21--chrX]""]" | chr21:6216499-chrX:70282261 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CTTNBP2--ELAPOR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CTTNBP2^ENSG00000077063.11 | chr7:117861209:- | ELAPOR2^ENSG00000164659.15 | chr7:86926916:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:20473:16988 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr7:30.65Mb]""]" | chr7:117861209-chr7:86926916 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CTSC--RAB38 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CTSC^ENSG00000109861.17 | chr11:88296133:- | RAB38^ENSG00000123892.12 | chr11:88149955:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1454:23620:25774 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8062 | "[""GTEx_recurrent_StarF2019"",""Babiceanu_Normal"",""ChimerSeq"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.09Mb]"",""NEIGHBORS[89626]""]" | chr11:88296133-chr11:88149955 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CTSC--DCTN6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CTSC^ENSG00000109861.17 | chr11:88337556:- | DCTN6^ENSG00000104671.8 | chr8:30164164:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2329:46927:12252 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:88337556-chr8:30164164 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CTDSPL2--PRPF38A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CTDSPL2^ENSG00000137770.14 | chr15:44459200:+ | PRPF38A^ENSG00000134748.13 | chr1:52408569:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1181:13208:7460 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:44459200-chr1:52408569 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CTAGE15--ARHGEF5 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | CTAGE15^ENSG00000271079.1 | chr7:143571949:+ | ARHGEF5^ENSG00000050327.15 | chr7:144371299:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:31087:8076 | . | NO_LDAS | 0.0007 | GT | 1.9656 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr7:0.78Mb]""]" | chr7:143571949-chr7:144371299 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CSTA--TPRG1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CSTA^ENSG00000121552.4 | chr3:122325358:+ | TPRG1^ENSG00000188001.10 | chr3:189215292:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1283:34622:14872 | . | YES_LDAS | 0.0034 | GT | 1.585 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr3:66.61Mb]""]" | chr3:122325358-chr3:189215292 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CSNK1G1--EDC3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CSNK1G1^ENSG00000169118.18 | chr15:64300319:- | EDC3^ENSG00000179151.13 | chr15:74675142:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:30423:11747 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr15:10.27Mb]""]" | chr15:64300319-chr15:74675142 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CSGALNACT2--MGME1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CSGALNACT2^ENSG00000169826.8 | chr10:43138567:+ | MGME1^ENSG00000125871.14 | chr20:17988166:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2256:38724:28870 | . | YES_LDAS | 0.0034 | GT | 1.3383 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr20]""]" | chr10:43138567-chr20:17988166 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CS--TLR2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CS^ENSG00000062485.19 | chr12:56286595:- | TLR2^ENSG00000137462.9 | chr4:153706248:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:8305:17661 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:56286595-chr4:153706248 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CRYL1--RHBDL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CRYL1^ENSG00000165475.15 | chr13:20432102:- | RHBDL1^ENSG00000103269.14 | chr16:676053:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:3880:7782 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr13--chr16]""]" | chr13:20432102-chr16:676053 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CRYBG3--TMSB15B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CRYBG3^ENSG00000080200.10 | chr3:97822355:+ | TMSB15B^ENSG00000158427.15 | chrX:103931139:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2391:33934:19987 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr3--chrX]""]" | chr3:97822355-chrX:103931139 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CRY1--KLHDC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CRY1^ENSG00000008405.12 | chr12:106992787:- | KLHDC2^ENSG00000165516.11 | chr14:49771594:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1126:7731:29053 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr14]""]" | chr12:106992787-chr14:49771594 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CRNDE--USH1C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CRNDE^ENSG00000245694.10 | chr16:54925212:- | USH1C^ENSG00000006611.17 | chr11:17522926:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2383:6987:26642 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr16--chr11]""]" | chr16:54925212-chr11:17522926 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CREM--CCDC7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CREM^ENSG00000095794.19 | chr10:35179276:+ | CCDC7^ENSG00000216937.13 | chr10:32451592:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2210:32753:6787 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.585 | "[""INTRACHROMOSOMAL[chr10:2.24Mb]""]" | chr10:35179276-chr10:32451592 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CR2--ZNF717 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CR2^ENSG00000117322.18 | chr1:207477954:+ | ZNF717^ENSG00000227124.11 | chr3:75736919:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1230:29355:19090 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:207477954-chr3:75736919 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| COX6A1--BCLAF3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | COX6A1^ENSG00000111775.3 | chr12:120438521:+ | BCLAF3^ENSG00000173681.16 | chrX:19917334:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1459:24914:7670 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chrX]""]" | chr12:120438521-chrX:19917334 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| COX18--SEC11C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COX18^ENSG00000163626.17 | chr4:73061895:- | SEC11C^ENSG00000166562.9 | chr18:59152565:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:19914:9127 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr18]""]" | chr4:73061895-chr18:59152565 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| COX15--HERC4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | COX15^ENSG00000014919.13 | chr10:99727441:- | HERC4^ENSG00000148634.16 | chr10:67955130:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:2925:8623 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr10:31.64Mb]""]" | chr10:99727441-chr10:67955130 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| COX11--COQ2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | COX11^ENSG00000166260.13 | chr17:54963306:- | COQ2^ENSG00000173085.15 | chr4:83279114:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:34145:7460 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr4]""]" | chr17:54963306-chr4:83279114 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CORO2B--TEAD3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CORO2B^ENSG00000103647.13 | chr15:68645364:+ | TEAD3^ENSG00000007866.22 | chr6:35475981:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2394:28441:4923 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr15--chr6]""]" | chr15:68645364-chr6:35475981 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| COQ2--AC004847.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COQ2^ENSG00000173085.15 | chr4:83273496:- | AC004847.1^ENSG00000260997.1 | chr7:44959448:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:27632:13191 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr4--chr7]""]" | chr4:83273496-chr7:44959448 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| COPS2--AC018638.8 | 1 | 0 | 0.13 | 0.0 | INCL_NON_REF_SPLICE | COPS2^ENSG00000166200.15 | chr15:49119045:- | AC018638.8^ENSG00000281896.1 | chr7:128617868:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1121:48488:28100 | . | YES_LDAS | 0.0004 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr7]""]" | chr15:49119045-chr7:128617868 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| COMMD2--ATP1B3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COMMD2^ENSG00000114744.9 | chr3:149752406:- | ATP1B3^ENSG00000069849.11 | chr3:141876881:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1409:51878:9365 | . | YES_LDAS | 0.0034 | GC | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr3:7.81Mb]""]" | chr3:149752406-chr3:141876881 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| COL4A3--COA5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | COL4A3^ENSG00000169031.20 | chr2:227310948:+ | COA5^ENSG00000183513.9 | chr2:98602645:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2292:45964:19020 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr2:128.56Mb]""]" | chr2:227310948-chr2:98602645 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| COG3--FAHD2A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COG3^ENSG00000136152.15 | chr13:45465137:+ | FAHD2A^ENSG00000115042.10 | chr2:95412476:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1237:40722:6521 | . | YES_LDAS | 0.0034 | GC | 1.5219 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr2]""]" | chr13:45465137-chr2:95412476 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| COA5--KIF5C | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | COA5^ENSG00000183513.9 | chr2:98604111:- | KIF5C^ENSG00000168280.18 | chr2:148978973:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1458:21039:16736 | . | NO_LDAS | 0.0008 | GT | 1.7465 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr2:50.27Mb]""]" | chr2:98604111-chr2:148978973 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CNTNAP3C--BX005040.4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNTNAP3C^ENSG00000283378.1 | chr9:61453030:+ | BX005040.4^ENSG00000283541.1 | chr9:61097039:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:34946:25942 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61453030-chr9:61097039 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CNTNAP3C--BX005040.4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNTNAP3C^ENSG00000283378.1 | chr9:61331052:+ | BX005040.4^ENSG00000283541.1 | chr9:61082046:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:32074:17577 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61331052-chr9:61082046 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CNTLN--IVNS1ABP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNTLN^ENSG00000044459.15 | chr9:17226287:+ | IVNS1ABP^ENSG00000116679.16 | chr1:185305643:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2473:16258:14984 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:17226287-chr1:185305643 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CNOT10--TTC13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNOT10^ENSG00000182973.19 | chr3:32762863:+ | TTC13^ENSG00000143643.13 | chr1:230961303:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:23992:11313 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:32762863-chr1:230961303 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| CNGB1--GAR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CNGB1^ENSG00000070729.14 | chr16:57949361:- | GAR1^ENSG00000109534.17 | chr4:109822405:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1438:2909:17002 | . | NO_LDAS | 0.0034 | GT | 0.971 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr16--chr4]""]" | chr16:57949361-chr4:109822405 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CLYBL--PCCA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CLYBL^ENSG00000125246.15 | chr13:99859049:+ | PCCA^ENSG00000175198.17 | chr13:100425633:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2145:36289:13667 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr13:0.19Mb]""]" | chr13:99859049-chr13:100425633 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CLPX--ACSM2B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CLPX^ENSG00000166855.9 | chr15:65164029:- | ACSM2B^ENSG00000066813.14 | chr16:20536835:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1164:26961:26713 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr15--chr16]""]" | chr15:65164029-chr16:20536835 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CLDN15--FIS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CLDN15^ENSG00000106404.14 | chr7:101237365:- | FIS1^ENSG00000214253.9 | chr7:101244139:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1237:30965:28492 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.371 | "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[638]""]" | chr7:101237365-chr7:101244139 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CLCF1--POLD4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CLCF1^ENSG00000175505.11 | chr11:67373524:- | POLD4^ENSG00000175482.9 | chr11:67353077:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2297:6081:20925 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5058 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[7196]""]" | chr11:67373524-chr11:67353077 | False | 0 | Excluded | annotation | pattern: | ConjoinG | FAIL | 1 | ||||||
| CKLF--CMTM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CKLF^ENSG00000217555.13 | chr16:66552793:+ | CMTM1^ENSG00000089505.18 | chr16:66577104:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:18547:14858 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9329 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr16:0.00Mb]"",""NEIGHBORS[142]""]" | chr16:66552793-chr16:66577104 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CISD2--ZMYND11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CISD2^ENSG00000145354.12 | chr4:102869187:+ | ZMYND11^ENSG00000015171.20 | chr10:179994:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:20861:21752 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr4--chr10]""]" | chr4:102869187-chr10:179994 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CIBAR1--TUBE1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CIBAR1^ENSG00000188343.13 | chr8:93705010:+ | TUBE1^ENSG00000074935.14 | chr6:112086904:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1250:46919:26474 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr8--chr6]""]" | chr8:93705010-chr6:112086904 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CIB1--ATP5MF | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CIB1^ENSG00000185043.12 | chr15:90233669:- | ATP5MF^ENSG00000241468.8 | chr7:99460193:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1173:11412:7039 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr7]""]" | chr15:90233669-chr7:99460193 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHST11--SLC41A2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHST11^ENSG00000171310.11 | chr12:104601991:+ | SLC41A2^ENSG00000136052.9 | chr12:104805337:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1331:21112:3466 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8295 | "[""Klijn_CellLines"",""INTRACHROMOSOMAL[chr12:0.04Mb]"",""LOCAL_INVERSION:+:-:[40539]""]" | chr12:104601991-chr12:104805337 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHN1--ZNF830 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CHN1^ENSG00000128656.15 | chr2:175005263:- | ZNF830^ENSG00000198783.6 | chr17:34962113:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2218:17431:25451 | . | NO_LDAS | 0.0034 | GT | 1.1589 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:175005263-chr17:34962113 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CHMP7--AC100861.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CHMP7^ENSG00000147457.14 | chr8:23260648:+ | AC100861.1^ENSG00000246582.3 | chr8:23225805:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2487:46644:6521 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[12711]""]" | chr8:23260648-chr8:23225805 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHMP4C--TERF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHMP4C^ENSG00000164695.5 | chr8:81732816:+ | TERF1^ENSG00000147601.15 | chr8:73045961:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2242:16452:23952 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:8.68Mb]""]" | chr8:81732816-chr8:73045961 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHMP4A--ZNF721 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CHMP4A^ENSG00000254505.11 | chr14:24210756:- | ZNF721^ENSG00000182903.16 | chr4:444432:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2183:31071:4797 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr14--chr4]""]" | chr14:24210756-chr4:444432 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CHMP4A--IRF9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHMP4A^ENSG00000254505.11 | chr14:24210348:- | IRF9^ENSG00000213928.9 | chr14:24164063:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:52113:14536 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr14:0.04Mb]"",""LOCAL_INVERSION:-:+:[43050]""]" | chr14:24210348-chr14:24164063 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHML--TSNAX | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHML^ENSG00000203668.3 | chr1:241639882:- | TSNAX^ENSG00000116918.15 | chr1:231542481:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1177:3848:18768 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:10.06Mb]""]" | chr1:241639882-chr1:231542481 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHM--AC117394.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CHM^ENSG00000188419.14 | chrX:86027491:- | AC117394.1^ENSG00000241671.1 | chr3:153129193:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:42752:14494 | . | YES_LDAS | 0.0017 | GT | 1.8295 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chrX--chr3]""]" | chrX:86027491-chr3:153129193 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHKA--ZNF343 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHKA^ENSG00000110721.12 | chr11:68097019:- | ZNF343^ENSG00000088876.13 | chr20:2493577:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:47404:11313 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr20]""]" | chr11:68097019-chr20:2493577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHCHD6--TXNRD3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHCHD6^ENSG00000159685.11 | chr3:126733222:+ | TXNRD3^ENSG00000197763.20 | chr3:126647296:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2449:6412:22901 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr3:0.05Mb]"",""LOCAL_INVERSION:+:-:[49116]""]" | chr3:126733222-chr3:126647296 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CFAP70--ACKR2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CFAP70^ENSG00000156042.18 | chr10:73291226:- | ACKR2^ENSG00000144648.16 | chr3:42866359:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:45082:19342 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:73291226-chr3:42866359 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CFAP44--SPICE1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CFAP44^ENSG00000206530.11 | chr3:113380899:- | SPICE1^ENSG00000163611.11 | chr3:113468404:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:29420:11411 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6402 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1108]""]" | chr3:113380899-chr3:113468404 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CFAP36--ACSM3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CFAP36^ENSG00000163001.12 | chr2:55519910:+ | ACSM3^ENSG00000005187.12 | chr16:20749650:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2312:13337:26993 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:55519910-chr16:20749650 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CETN3--DEPDC1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CETN3^ENSG00000153140.9 | chr5:90399358:- | DEPDC1B^ENSG00000035499.13 | chr5:60647533:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2313:19300:12910 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.2729 | "[""INTRACHROMOSOMAL[chr5:29.69Mb]""]" | chr5:90399358-chr5:60647533 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CERS5--TRMT12 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CERS5^ENSG00000139624.14 | chr12:50133212:- | TRMT12^ENSG00000183665.5 | chr8:124450925:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2256:5903:18571 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:50133212-chr8:124450925 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CEP85L--GET1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CEP85L^ENSG00000111860.14 | chr6:118464213:- | GET1^ENSG00000182093.16 | chr21:39390830:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:18369:9618 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr6--chr21]""]" | chr6:118464213-chr21:39390830 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CEP68--CMTR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CEP68^ENSG00000011523.14 | chr2:65072521:+ | CMTR1^ENSG00000137200.13 | chr6:37435713:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:32939:3438 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr2--chr6]""]" | chr2:65072521-chr6:37435713 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CEP44--AC025458.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CEP44^ENSG00000164118.13 | chr4:174317915:+ | AC025458.1^ENSG00000249774.1 | chr5:31923466:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2317:38942:16133 | . | YES_LDAS | 0.0034 | AT | 1.585 | AC | 1.8062 | "[""INTERCHROMOSOMAL[chr4--chr5]""]" | chr4:174317915-chr5:31923466 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CEP290--HEATR5A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CEP290^ENSG00000198707.17 | chr12:88120114:- | HEATR5A^ENSG00000129493.15 | chr14:31296063:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:46425:18922 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr14]""]" | chr12:88120114-chr14:31296063 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CEP135--FZD3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CEP135^ENSG00000174799.11 | chr4:55992085:+ | FZD3^ENSG00000104290.11 | chr8:28555738:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1277:49880:14956 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr4--chr8]""]" | chr4:55992085-chr8:28555738 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CEP112--TMPO | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CEP112^ENSG00000154240.17 | chr17:66175044:- | TMPO^ENSG00000120802.14 | chr12:98537475:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1382:32098:28408 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chr12]""]" | chr17:66175044-chr12:98537475 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CENPV--PJVK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CENPV^ENSG00000166582.10 | chr17:16349931:- | PJVK^ENSG00000204311.15 | chr2:178460982:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1261:40002:28170 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:16349931-chr2:178460982 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CENPN--GCSH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CENPN^ENSG00000166451.14 | chr16:81007277:+ | GCSH^ENSG00000140905.11 | chr16:81087664:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1220:41579:13219 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr16:0.05Mb]"",""LOCAL_INVERSION:+:-:[48831]""]" | chr16:81007277-chr16:81087664 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CENPI--MYL6B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CENPI^ENSG00000102384.13 | chrX:101098539:+ | MYL6B^ENSG00000196465.10 | chr12:56157468:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:2424:25241 | . | YES_LDAS | 0.0034 | GT | 1.371 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chrX--chr12]""]" | chrX:101098539-chr12:56157468 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CENATAC--AC142086.6 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | CENATAC^ENSG00000186166.9 | chr11:119011283:+ | AC142086.6^ENSG00000277304.1 | chr16:32946317:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2284:14680:29571 | . | NO_LDAS | 0.0008 | GT | 1.9086 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr11--chr16]""]" | chr11:119011283-chr16:32946317 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CDK8P1--CDK8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CDK8P1^ENSG00000230044.1 | chr2:11665846:- | CDK8^ENSG00000132964.12 | chr13:26396300:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:47445:23882 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr2--chr13]""]" | chr2:11665846-chr13:26396300 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CDK8--IFT88 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CDK8^ENSG00000132964.12 | chr13:26353880:+ | IFT88^ENSG00000032742.18 | chr13:20690705:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2356:45268:1476 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr13:5.56Mb]""]" | chr13:26353880-chr13:20690705 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CDK7--AC008015.1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | CDK7^ENSG00000134058.12 | chr5:69235453:+ | AC008015.1^ENSG00000258578.2 | chr14:76013704:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2189:20416:18179 | . | NO_LDAS | 0.0008 | GT | 1.9219 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr14]""]" | chr5:69235453-chr14:76013704 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CDK6--POT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CDK6^ENSG00000105810.10 | chr7:92725626:- | POT1^ENSG00000128513.16 | chr7:124842963:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1190:16581:15713 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr7:31.99Mb]""]" | chr7:92725626-chr7:124842963 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CDIN1--AL669831.4 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | CDIN1^ENSG00000186073.14 | chr15:36709961:+ | AL669831.4^ENSG00000230092.7 | chr1:810170:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2486:23984:23378 | . | YES_LDAS | 0.0017 | GT | 1.9086 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:36709961-chr1:810170 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CDCA5--DNAJC17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CDCA5^ENSG00000146670.10 | chr11:65079382:- | DNAJC17^ENSG00000104129.10 | chr15:40807455:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1480:33085:14900 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:65079382-chr15:40807455 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CDC42SE1--TRIM40 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CDC42SE1^ENSG00000197622.13 | chr1:151055677:- | TRIM40^ENSG00000204614.9 | chr6:30146063:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1345:24736:18796 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:151055677-chr6:30146063 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CDC42SE1--MYH13 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CDC42SE1^ENSG00000197622.13 | chr1:151055677:- | MYH13^ENSG00000006788.14 | chr17:10320478:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1345:24736:18796 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:151055677-chr17:10320478 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CDC25A--DSN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CDC25A^ENSG00000164045.12 | chr3:48184653:- | DSN1^ENSG00000149636.16 | chr20:36771473:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:2383:21948 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr3--chr20]""]" | chr3:48184653-chr20:36771473 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CD99P1--MCPH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CD99P1^ENSG00000223773.7 | chrX:2626642:+ | MCPH1^ENSG00000147316.13 | chr8:6455143:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1251:17131:2205 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chrY--chr8]""]" | chrX:2626642-chr8:6455143 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CD99L2--FAM122C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CD99L2^ENSG00000102181.21 | chrX:150898522:- | FAM122C^ENSG00000156500.15 | chrX:134829226:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2360:50697:1518 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chrX:15.91Mb]""]" | chrX:150898522-chrX:134829226 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CD83--AL009177.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CD83^ENSG00000112149.10 | chr6:14118065:+ | AL009177.1^ENSG00000286277.1 | chr6:14498057:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2371:48707:18950 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr6:0.29Mb]""]" | chr6:14118065-chr6:14498057 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CCT6P1--AC073210.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCT6P1^ENSG00000228409.6 | chr7:65763344:+ | AC073210.1^ENSG00000227113.2 | chr7:65078624:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:34703:17703 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr7:0.67Mb]""]" | chr7:65763344-chr7:65078624 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCSER1--TEX35 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCSER1^ENSG00000184305.15 | chr4:90309377:+ | TEX35^ENSG00000240021.10 | chr1:178521683:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:12884:20491 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:90309377-chr1:178521683 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CCP110--ERI2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCP110^ENSG00000103540.16 | chr16:19532544:+ | ERI2^ENSG00000196678.14 | chr16:20789557:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2489:47024:12392 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr16:1.23Mb]""]" | chr16:19532544-chr16:20789557 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCNYL4--ZNF37A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCNYL4^ENSG00000224761.4 | chr10:38177975:+ | ZNF37A^ENSG00000075407.18 | chr10:38114755:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:31022:26741 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[14355]""]" | chr10:38177975-chr10:38114755 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCNJL--TTC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCNJL^ENSG00000135083.16 | chr5:160311858:- | TTC1^ENSG00000113312.11 | chr5:160035140:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:17779:1252 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 0.9183 | "[""INTRACHROMOSOMAL[chr5:0.18Mb]""]" | chr5:160311858-chr5:160035140 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCNDBP1--ZNF780A | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CCNDBP1^ENSG00000166946.14 | chr15:43188626:+ | ZNF780A^ENSG00000197782.14 | chr19:40083237:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2358:35480:2794 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr15--chr19]""]" | chr15:43188626-chr19:40083237 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC62--AL035458.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CCDC62^ENSG00000130783.14 | chr12:122792121:+ | AL035458.1^ENSG00000236456.1 | chr20:34246332:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1491:15780:27834 | . | YES_LDAS | 0.0017 | GT | 1.7232 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:122792121-chr20:34246332 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC24--MFSD13A | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | CCDC24^ENSG00000159214.13 | chr1:43993906:+ | MFSD13A^ENSG00000138111.14 | chr10:102475782:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:1332:8384 | . | NO_LDAS | 0.0011 | GC | 1.9656 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:43993906-chr10:102475782 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CCDC198--NPIPB10P | 1 | 0 | 0.06 | 0.0 | ONLY_REF_SPLICE | CCDC198^ENSG00000100557.10 | chr14:57475582:- | NPIPB10P^ENSG00000196796.5 | chr16:29050502:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1169:45924:10010 | . | YES_LDAS | 0.0002 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr16]""]" | chr14:57475582-chr16:29050502 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC18--CENPI | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCDC18^ENSG00000122483.17 | chr1:93264901:+ | CENPI^ENSG00000102384.13 | chrX:101140666:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1106:12334:26993 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chrX]""]" | chr1:93264901-chrX:101140666 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC151--FAT3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCDC151^ENSG00000198003.12 | chr19:11426873:- | FAT3^ENSG00000165323.16 | chr11:92799297:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2366:47162:10781 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:11426873-chr11:92799297 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CCDC15--SLC37A2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCDC15^ENSG00000149548.15 | chr11:125039069:+ | SLC37A2^ENSG00000134955.12 | chr11:125076757:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:43367:21416 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[21813]""]" | chr11:125039069-chr11:125076757 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CCDC136--COBLL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCDC136^ENSG00000128596.17 | chr7:128812929:+ | COBLL1^ENSG00000082438.18 | chr2:164779755:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2320:44063:6058 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr7--chr2]""]" | chr7:128812929-chr2:164779755 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CBLN4--AC012676.1 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | CBLN4^ENSG00000054803.4 | chr20:56004100:- | AC012676.1^ENSG00000262712.1 | chr16:4337173:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:32907:28941 | . | NO_LDAS | 0.0007 | GT | 1.4295 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr20--chr16]""]" | chr20:56004100-chr16:4337173 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CATSPER3--C5orf66 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CATSPER3^ENSG00000152705.8 | chr5:135009490:+ | C5orf66^ENSG00000224186.8 | chr5:135174042:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:26815:12056 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr5:0.02Mb]"",""NEIGHBORS[21584]""]" | chr5:135009490-chr5:135174042 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CASP8--STRADB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CASP8^ENSG00000064012.22 | chr2:201285317:+ | STRADB^ENSG00000082146.13 | chr2:201454746:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2425:1558:8469 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.10Mb]""]" | chr2:201285317-chr2:201454746 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CASP6--PPP1R11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CASP6^ENSG00000138794.10 | chr4:109694555:- | PPP1R11^ENSG00000204619.8 | chr6:30067193:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:12601:20001 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:109694555-chr6:30067193 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CASP4--TSPAN3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CASP4^ENSG00000196954.14 | chr11:104951009:- | TSPAN3^ENSG00000140391.15 | chr15:77052444:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:38287:13401 | . | YES_LDAS | 0.0034 | GC | 1.9329 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:104951009-chr15:77052444 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CASC9--AC100782.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CASC9^ENSG00000249395.4 | chr8:75324221:- | AC100782.1^ENSG00000254238.1 | chr8:75029459:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:16970:3634 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8062 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[90949]""]" | chr8:75324221-chr8:75029459 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CAPZA2--ARMC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CAPZA2^ENSG00000198898.14 | chr7:116862650:+ | ARMC1^ENSG00000104442.10 | chr8:65627433:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2212:23393:8202 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:116862650-chr8:65627433 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CAP2--GRIN2A | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CAP2^ENSG00000112186.12 | chr6:17426694:+ | GRIN2A^ENSG00000183454.18 | chr16:9755337:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2222:29622:10584 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:17426694-chr16:9755337 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CAP2--AC132008.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CAP2^ENSG00000112186.12 | chr6:17426694:+ | AC132008.2^ENSG00000214135.8 | chr3:197593126:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2222:29622:10584 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr6--chr3]""]" | chr6:17426694-chr3:197593126 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CAMLG--GCSH | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CAMLG^ENSG00000164615.6 | chr5:134744025:+ | GCSH^ENSG00000140905.11 | chr16:81082762:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:33570:11481 | . | YES_LDAS | 0.0034 | AT | 1.9329 | AC | 1.5329 | "[""INTERCHROMOSOMAL[chr5--chr16]""]" | chr5:134744025-chr16:81082762 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CAMKMT--SLC8A3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CAMKMT^ENSG00000143919.15 | chr2:44362145:+ | SLC8A3^ENSG00000100678.19 | chr14:70167459:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:27940:1224 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr2--chr14]""]" | chr2:44362145-chr14:70167459 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CACNB2--NEBL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CACNB2^ENSG00000165995.22 | chr10:18150975:+ | NEBL^ENSG00000078114.19 | chr10:20961779:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2290:2569:18796 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr10:2.24Mb]""]" | chr10:18150975-chr10:20961779 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CABYR--TTC39C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CABYR^ENSG00000154040.21 | chr18:24156042:+ | TTC39C^ENSG00000168234.13 | chr18:24080585:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2260:3710:2892 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr18:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3377]""]" | chr18:24156042-chr18:24080585 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CA13--AC011005.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CA13^ENSG00000185015.8 | chr8:85281639:+ | AC011005.1^ENSG00000230626.4 | chr7:129126818:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:44540:8398 | . | YES_LDAS | 0.0017 | GT | 1.7968 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:85281639-chr7:129126818 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C8orf88--PIP4P2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C8orf88^ENSG00000253250.3 | chr8:90960742:- | PIP4P2^ENSG00000155099.8 | chr8:91021404:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:11129:29305 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[8564]""]" | chr8:90960742-chr8:91021404 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C7orf25--VPS41 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C7orf25^ENSG00000136197.13 | chr7:42911915:- | VPS41^ENSG00000006715.16 | chr7:38898129:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:5555:4965 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr7:3.98Mb]""]" | chr7:42911915-chr7:38898129 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C7orf25--DMGDH | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C7orf25^ENSG00000136197.13 | chr7:42910813:- | DMGDH^ENSG00000132837.15 | chr5:79028624:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2492:22220:20239 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:42910813-chr5:79028624 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| C6orf62--MOB3A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C6orf62^ENSG00000112308.13 | chr6:24708777:- | MOB3A^ENSG00000172081.14 | chr19:2077013:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:38958:3410 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:24708777-chr19:2077013 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C20orf27--RFESD | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | C20orf27^ENSG00000101220.18 | chr20:3754404:- | RFESD^ENSG00000175449.14 | chr5:95656529:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:27746:22131 | . | NO_LDAS | 0.0017 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr5]""]" | chr20:3754404-chr5:95656529 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| C1QTNF6--ZFYVE1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C1QTNF6^ENSG00000133466.14 | chr22:37182341:- | ZFYVE1^ENSG00000165861.14 | chr14:73026977:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1370:14227:11663 | . | YES_LDAS | 0.0034 | AT | 1.8256 | AC | 1.4295 | "[""INTERCHROMOSOMAL[chr22--chr14]""]" | chr22:37182341-chr14:73026977 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C1GALT1--MSRA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C1GALT1^ENSG00000106392.11 | chr7:7182820:+ | MSRA^ENSG00000175806.15 | chr8:10207833:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:48496:7095 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:7182820-chr8:10207833 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C16orf87--TENT2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C16orf87^ENSG00000155330.10 | chr16:46831084:- | TENT2^ENSG00000164329.13 | chr5:79645123:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:29719:28380 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr5]""]" | chr16:46831084-chr5:79645123 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C12orf75--EBLN3P | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C12orf75^ENSG00000235162.9 | chr12:105330937:+ | EBLN3P^ENSG00000281649.2 | chr9:37086668:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1383:45584:28926 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr9]""]" | chr12:105330937-chr9:37086668 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C11orf54--SYVN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C11orf54^ENSG00000182919.15 | chr11:93762514:+ | SYVN1^ENSG00000162298.19 | chr11:65128359:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1213:39743:6143 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr11:28.61Mb]""]" | chr11:93762514-chr11:65128359 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C10orf88--GSDMB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C10orf88^ENSG00000119965.13 | chr10:122954015:- | GSDMB^ENSG00000073605.18 | chr17:39909924:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2423:25270:16133 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr10--chr17]""]" | chr10:122954015-chr17:39909924 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C10orf71--CCDC114 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | C10orf71^ENSG00000177354.12 | chr10:49325741:+ | CCDC114^ENSG00000105479.16 | chr19:48318554:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:43117:11705 | . | NO_LDAS | 0.0017 | GT | 1.5219 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr10--chr19]""]" | chr10:49325741-chr19:48318554 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BZW2--CRPPA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BZW2^ENSG00000136261.15 | chr7:16646288:+ | CRPPA^ENSG00000214960.11 | chr7:16216197:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1321:38586:27007 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.6049 | "[""INTRACHROMOSOMAL[chr7:0.14Mb]""]" | chr7:16646288-chr7:16216197 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BX005040.4--CNTNAP3C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BX005040.4^ENSG00000283541.1 | chr9:61104459:- | CNTNAP3C^ENSG00000283378.1 | chr9:61447338:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1349:47331:14130 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61104459-chr9:61447338 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BTRC--RAB4A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BTRC^ENSG00000166167.18 | chr10:101550822:+ | RAB4A^ENSG00000168118.12 | chr1:229304442:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1189:5013:27539 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:101550822-chr1:229304442 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BTBD8--TBK1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BTBD8^ENSG00000189195.15 | chr1:92171460:+ | TBK1^ENSG00000183735.11 | chr12:64480012:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1203:47987:11145 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:92171460-chr12:64480012 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BRD8--ZCCHC9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BRD8^ENSG00000112983.18 | chr5:138164918:- | ZCCHC9^ENSG00000131732.12 | chr5:81304766:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:47882:3929 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr5:56.83Mb]""]" | chr5:138164918-chr5:81304766 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BMS1P2--CDK19 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BMS1P2^ENSG00000251079.6 | chr10:47542167:- | CDK19^ENSG00000155111.15 | chr6:110746201:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2349:47979:2275 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr10--chr6]""]" | chr10:47542167-chr6:110746201 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BMPR1A--COX6C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BMPR1A^ENSG00000107779.14 | chr10:86921586:+ | COX6C^ENSG00000164919.11 | chr8:99892008:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2272:14494:10921 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr10--chr8]""]" | chr10:86921586-chr8:99892008 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BLOC1S4--TRPC3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BLOC1S4^ENSG00000186222.5 | chr4:6716337:+ | TRPC3^ENSG00000138741.11 | chr4:121951605:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:8079:25620 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.371 | "[""INTRACHROMOSOMAL[chr4:115.16Mb]""]" | chr4:6716337-chr4:121951605 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BLOC1S2--MESD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BLOC1S2^ENSG00000196072.12 | chr10:100286097:- | MESD^ENSG00000117899.11 | chr15:80952296:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1186:29970:8020 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:100286097-chr15:80952296 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BLACE--INVS | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BLACE^ENSG00000204960.7 | chr7:155363104:- | INVS^ENSG00000119509.13 | chr9:100226062:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2110:21379:4293 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr9]""]" | chr7:155363104-chr9:100226062 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BIN3--ST7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BIN3^ENSG00000147439.13 | chr8:22624206:- | ST7^ENSG00000004866.22 | chr7:117209849:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:19575:26446 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:22624206-chr7:117209849 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BICDL1--AL139246.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BICDL1^ENSG00000135127.11 | chr12:119998736:+ | AL139246.3^ENSG00000228037.1 | chr1:2584184:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:8847:25465 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:119998736-chr1:2584184 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BEX3--Z99755.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BEX3^ENSG00000166681.14 | chrX:103377672:+ | Z99755.1^ENSG00000238153.1 | chr22:35165208:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1117:6388:12546 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chrX--chr22]""]" | chrX:103377672-chr22:35165208 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BDNF--GRIK4 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | BDNF^ENSG00000176697.20 | chr11:27658505:- | GRIK4^ENSG00000149403.13 | chr11:120956793:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1179:45163:16119 | . | NO_LDAS | 0.0017 | AT | 1.8892 | AC | 1.9329 | "[""INTRACHROMOSOMAL[chr11:92.79Mb]""]" | chr11:27658505-chr11:120956793 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BDH1--FECH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BDH1^ENSG00000161267.12 | chr3:197522640:- | FECH^ENSG00000066926.12 | chr18:57573365:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1323:45503:9477 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chr18]""]" | chr3:197522640-chr18:57573365 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BCL7C--AC073046.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BCL7C^ENSG00000099385.12 | chr16:30888860:- | AC073046.1^ENSG00000235499.1 | chr2:73985980:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:50567:26600 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr2]""]" | chr16:30888860-chr2:73985980 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BCKDHB--AL359715.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BCKDHB^ENSG00000083123.15 | chr6:80273221:+ | AL359715.4^ENSG00000279022.1 | chr6:80440828:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1484:8993:23672 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[94460]""]" | chr6:80273221-chr6:80440828 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| BCKDHB--AL359715.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BCKDHB^ENSG00000083123.15 | chr6:80273221:+ | AL359715.1^ENSG00000233967.7 | chr6:80462872:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:45519:1546 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr6:0.10Mb]"",""NEIGHBORS[95025]""]" | chr6:80273221-chr6:80462872 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| BBS9--DTX2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BBS9^ENSG00000122507.21 | chr7:33534176:+ | DTX2^ENSG00000091073.19 | chr7:76463545:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2449:21136:23041 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr7:42.58Mb]""]" | chr7:33534176-chr7:76463545 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BBS4--AC098969.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BBS4^ENSG00000140463.14 | chr15:72735193:+ | AC098969.1^ENSG00000285738.1 | chr3:66794087:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1163:51182:4069 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr15--chr3]""]" | chr15:72735193-chr3:66794087 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BBS10--AC078820.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BBS10^ENSG00000179941.9 | chr12:76332804:- | AC078820.1^ENSG00000258088.1 | chr12:75694975:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1354:19413:22327 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr12:0.65Mb]""]" | chr12:76332804-chr12:75694975 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BBS10--AC078820.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BBS10^ENSG00000179941.9 | chr12:76332804:- | AC078820.1^ENSG00000258088.1 | chr12:75694947:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2370:47833:2892 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr12:0.65Mb]""]" | chr12:76332804-chr12:75694947 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BAZ1A--MRPS7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BAZ1A^ENSG00000198604.11 | chr14:34874492:- | MRPS7^ENSG00000125445.11 | chr17:75262497:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1111:41337:13303 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr17]""]" | chr14:34874492-chr17:75262497 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BARD1--AC068051.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BARD1^ENSG00000138376.11 | chr2:214809412:- | AC068051.1^ENSG00000197585.10 | chr2:214436317:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2180:12431:17577 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr2:0.04Mb]"",""NEIGHBORS[41400]""]" | chr2:214809412-chr2:214436317 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BACH2--ANKRD6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BACH2^ENSG00000112182.15 | chr6:90206569:- | ANKRD6^ENSG00000135299.17 | chr6:89595916:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1309:22333:2555 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr6:0.29Mb]""]" | chr6:90206569-chr6:89595916 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BACE2--HMGXB4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BACE2^ENSG00000182240.16 | chr21:41246063:+ | HMGXB4^ENSG00000100281.14 | chr22:35262323:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2287:17018:8258 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr21--chr22]""]" | chr21:41246063-chr22:35262323 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BABAM2--WARS2-AS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BABAM2^ENSG00000158019.21 | chr2:27988087:+ | WARS2-AS1^ENSG00000231365.6 | chr1:119150793:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:10967:23476 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:27988087-chr1:119150793 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BABAM1--PI4KB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BABAM1^ENSG00000105393.16 | chr19:17267527:+ | PI4KB^ENSG00000143393.16 | chr1:151307801:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1146:40746:26713 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:17267527-chr1:151307801 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BAALC-AS1--CHCHD7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BAALC-AS1^ENSG00000247081.8 | chr8:103246294:- | CHCHD7^ENSG00000170791.18 | chr8:56217331:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1163:6250:11663 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:46.93Mb]""]" | chr8:103246294-chr8:56217331 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| B4GALNT1--PROC | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | B4GALNT1^ENSG00000135454.14 | chr12:57626250:- | PROC^ENSG00000115718.18 | chr2:127428766:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:51651:18641 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:57626250-chr2:127428766 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AXDND1--SOAT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AXDND1^ENSG00000162779.22 | chr1:179370078:+ | SOAT1^ENSG00000057252.13 | chr1:179337837:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:37429:5442 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[7040]""]" | chr1:179370078-chr1:179337837 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AUP1--LINC02667 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AUP1^ENSG00000115307.17 | chr2:74527940:- | LINC02667^ENSG00000224190.2 | chr10:128915668:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1415:42332:2752 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:74527940-chr10:128915668 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ATPSCKMT--KYNU | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATPSCKMT^ENSG00000150756.14 | chr5:10227281:- | KYNU^ENSG00000115919.15 | chr2:143053226:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2398:28053:10444 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr2]""]" | chr5:10227281-chr2:143053226 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ATP6V0A1--JAK3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATP6V0A1^ENSG00000033627.17 | chr17:42494473:+ | JAK3^ENSG00000105639.20 | chr19:17844403:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1309:22050:2429 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr19]""]" | chr17:42494473-chr19:17844403 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ATP5PB--GPD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATP5PB^ENSG00000116459.11 | chr1:111449873:+ | GPD2^ENSG00000115159.16 | chr2:156476098:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1222:34396:8483 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:111449873-chr2:156476098 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATP5PB--ATP5PBP2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ATP5PB^ENSG00000116459.11 | chr1:111456249:+ | ATP5PBP2^ENSG00000214342.2 | chr7:94739032:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2386:5538:4433 | . | NO_LDAS | 0.0017 | GT | 1.8295 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:111456249-chr7:94739032 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ATP5MD--RNF7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATP5MD^ENSG00000173915.16 | chr10:103392191:- | RNF7^ENSG00000114125.14 | chr3:141747123:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:47372:26530 | . | YES_LDAS | 0.0034 | GT | 1.6049 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:103392191-chr3:141747123 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATP5MC1--VPS54 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATP5MC1^ENSG00000159199.14 | chr17:48895334:+ | VPS54^ENSG00000143952.20 | chr2:63914287:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2186:48092:18473 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:48895334-chr2:63914287 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATP5F1C--PLEKHA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATP5F1C^ENSG00000165629.20 | chr10:7796155:+ | PLEKHA1^ENSG00000107679.14 | chr10:122406576:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1354:13410:9828 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr10:114.57Mb]""]" | chr10:7796155-chr10:122406576 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATP5F1C--DAD1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ATP5F1C^ENSG00000165629.20 | chr10:7799181:+ | DAD1^ENSG00000129562.11 | chr14:22589034:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2368:3419:19510 | . | YES_LDAS | 0.0017 | GC | 1.7968 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr14]""]" | chr10:7799181-chr14:22589034 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATP11C--MTMR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATP11C^ENSG00000101974.14 | chrX:139782547:- | MTMR1^ENSG00000063601.17 | chrX:150699195:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:40034:8581 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chrX:10.75Mb]""]" | chrX:139782547-chrX:150699195 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATG5--STX7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATG5^ENSG00000057663.16 | chr6:106316101:- | STX7^ENSG00000079950.14 | chr6:132503588:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:11978:16343 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr6:26.12Mb]""]" | chr6:106316101-chr6:132503588 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATG4C--APIP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATG4C^ENSG00000125703.15 | chr1:62805255:+ | APIP^ENSG00000149089.13 | chr11:34895110:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1165:4851:13611 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:62805255-chr11:34895110 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATF3--ST7L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATF3^ENSG00000162772.17 | chr1:212615261:+ | ST7L^ENSG00000007341.19 | chr1:112611003:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:14478:15461 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr1:99.94Mb]""]" | chr1:212615261-chr1:112611003 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATF2--SETBP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATF2^ENSG00000115966.17 | chr2:175097444:- | SETBP1^ENSG00000152217.20 | chr18:44952879:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2126:26071:25956 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr2--chr18]""]" | chr2:175097444-chr18:44952879 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ATE1-AS1--RBP7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATE1-AS1^ENSG00000226864.2 | chr10:121928634:+ | RBP7^ENSG00000162444.12 | chr1:10015782:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1379:33829:24485 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:121928634-chr1:10015782 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ASS1P5--GSTO1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ASS1P5^ENSG00000227881.1 | chrX:115665106:+ | GSTO1^ENSG00000148834.13 | chr10:104255163:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2196:48367:10907 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chrX--chr10]""]" | chrX:115665106-chr10:104255163 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ASNSD1--ANKAR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ASNSD1^ENSG00000138381.10 | chr2:189667945:+ | ANKAR^ENSG00000151687.14 | chr2:189689527:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1172:44832:29025 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS[3459]""]" | chr2:189667945-chr2:189689527 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ASH2L--RPS3AP26 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | ASH2L^ENSG00000129691.16 | chr8:38128824:+ | RPS3AP26^ENSG00000214389.2 | chr7:98386527:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1286:15691:20113 | . | NO_LDAS | 0.0011 | GT | 1.371 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:38128824-chr7:98386527 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ASH1L-AS1--HSD17B14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ASH1L-AS1^ENSG00000235919.4 | chr1:155563329:+ | HSD17B14^ENSG00000087076.9 | chr19:48815141:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:29558:5512 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:155563329-chr19:48815141 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ASB7--NAA35 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ASB7^ENSG00000183475.13 | chr15:100630042:+ | NAA35^ENSG00000135040.16 | chr9:85974967:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:17973:17619 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr15--chr9]""]" | chr15:100630042-chr9:85974967 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ASB7--ACVR1C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ASB7^ENSG00000183475.13 | chr15:100612427:+ | ACVR1C^ENSG00000123612.16 | chr2:157587417:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2267:32478:7516 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr15--chr2]""]" | chr15:100612427-chr2:157587417 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARTN--NHLH1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARTN^ENSG00000117407.17 | chr1:43935716:+ | NHLH1^ENSG00000171786.6 | chr1:160372703:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2405:29784:20337 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr1:116.43Mb]""]" | chr1:43935716-chr1:160372703 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARSJ--AC092567.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARSJ^ENSG00000180801.14 | chr4:113978980:- | AC092567.1^ENSG00000226605.1 | chr2:62826072:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:26564:2121 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:113978980-chr2:62826072 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARSG--UVRAG | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARSG^ENSG00000141337.13 | chr17:68401450:+ | UVRAG^ENSG00000198382.9 | chr11:75979911:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1198:40228:25451 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:68401450-chr11:75979911 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARPC5L--YY1AP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARPC5L^ENSG00000136950.13 | chr9:124864107:+ | YY1AP1^ENSG00000163374.20 | chr1:155675096:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1202:8564:18782 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:124864107-chr1:155675096 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARMH3--FLCN | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARMH3^ENSG00000120029.13 | chr10:101956597:- | FLCN^ENSG00000154803.13 | chr17:17212617:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1284:18701:25886 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr17]""]" | chr10:101956597-chr17:17212617 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARMH3--CBWD2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARMH3^ENSG00000120029.13 | chr10:101889733:- | CBWD2^ENSG00000136682.15 | chr2:113460680:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1198:16112:18571 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:101889733-chr2:113460680 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARMC4--SLC12A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARMC4^ENSG00000169126.16 | chr10:27907663:- | SLC12A1^ENSG00000074803.20 | chr15:48217832:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:21581:28969 | . | NO_LDAS | 0.0034 | GT | 1.6049 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:27907663-chr15:48217832 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARMC4--DPM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARMC4^ENSG00000169126.16 | chr10:27853242:- | DPM1^ENSG00000000419.13 | chr20:50948662:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:16242:21374 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr10--chr20]""]" | chr10:27853242-chr20:50948662 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARL8B--MTMR14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARL8B^ENSG00000134108.14 | chr3:5122588:+ | MTMR14^ENSG00000163719.20 | chr3:9653621:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1204:49985:6171 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr3:4.47Mb]""]" | chr3:5122588-chr3:9653621 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARL3--EIF4E2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARL3^ENSG00000138175.9 | chr10:102685816:- | EIF4E2^ENSG00000135930.14 | chr2:232564247:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1403:31507:1210 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:102685816-chr2:232564247 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARL2--AP005264.4 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ARL2^ENSG00000213465.8 | chr11:65021742:+ | AP005264.4^ENSG00000267733.5 | chr18:12222889:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1416:39792:20435 | . | NO_LDAS | 0.0017 | GC | 1.9219 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr11--chr18]""]" | chr11:65021742-chr18:12222889 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARL17A--RPS6KC1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ARL17A^ENSG00000185829.18 | chr17:46570759:- | RPS6KC1^ENSG00000136643.12 | chr1:213242569:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:3289:13933 | . | YES_LDAS | 0.0017 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:46570759-chr1:213242569 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARL13B--SRFBP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARL13B^ENSG00000169379.17 | chr3:94003908:+ | SRFBP1^ENSG00000151304.6 | chr5:122019260:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2158:30690:24148 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr5]""]" | chr3:94003908-chr5:122019260 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARL1--CEBPA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARL1^ENSG00000120805.14 | chr12:101402865:- | CEBPA^ENSG00000245848.3 | chr19:33302352:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1322:44403:16315 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr12--chr19]""]" | chr12:101402865-chr19:33302352 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARID5A--SEMA4C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARID5A^ENSG00000196843.17 | chr2:96536830:+ | SEMA4C^ENSG00000168758.11 | chr2:96865929:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1121:44589:2205 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr2:0.31Mb]""]" | chr2:96536830-chr2:96865929 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARID3C--DCTN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARID3C^ENSG00000205143.3 | chr9:34627697:- | DCTN3^ENSG00000137100.16 | chr9:34618760:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:16339:20533 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7465 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr9:0.00Mb]"",""NEIGHBORS[856]""]" | chr9:34627697-chr9:34618760 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ARHGEF35-AS1--ARHGEF5 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | ARHGEF35-AS1^ENSG00000244198.7 | chr7:144239388:+ | ARHGEF5^ENSG00000050327.15 | chr7:144362658:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:39525:19664 | . | YES_LDAS | 0.0008 | GT | 1.9329 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr7:0.07Mb]"",""NEIGHBORS[74741]""]" | chr7:144239388-chr7:144362658 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ARHGAP42--AC073869.1 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | ARHGAP42^ENSG00000165895.19 | chr11:100687832:+ | AC073869.1^ENSG00000273073.1 | chr2:131462125:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1239:46045:6689 | . | YES_LDAS | 0.0011 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr2]""]" | chr11:100687832-chr2:131462125 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARHGAP19--SLIT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARHGAP19^ENSG00000213390.11 | chr10:97229147:- | SLIT1^ENSG00000187122.17 | chr10:97164890:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1167:26710:29025 | . | NO_LDAS | 0.0034 | GT | 0.971 | AG | 1.8892 | "[""ConjoinG"",""Greger_Normal"",""INTRACHROMOSOMAL[chr10:0.04Mb]"",""NEIGHBORS[36214]""]" | chr10:97229147-chr10:97164890 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ARG1--AL163540.1 | 1 | 0 | 0.07 | 0.0 | ONLY_REF_SPLICE | ARG1^ENSG00000118520.15 | chr6:131547198:+ | AL163540.1^ENSG00000204790.9 | chr9:63986283:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1441:22689:3760 | . | YES_LDAS | 0.0002 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr9]""]" | chr6:131547198-chr9:63986283 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARAF--AC019193.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARAF^ENSG00000078061.14 | chrX:47563329:+ | AC019193.4^ENSG00000286821.1 | chr4:183020393:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1447:48140:4545 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chrX--chr4]""]" | chrX:47563329-chr4:183020393 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARAF--ABITRAM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARAF^ENSG00000078061.14 | chrX:47563329:+ | ABITRAM^ENSG00000119328.12 | chr9:108936308:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:1154:13485 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chrX--chr9]""]" | chrX:47563329-chr9:108936308 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| APIP--DNAAF4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | APIP^ENSG00000149089.13 | chr11:34916228:- | DNAAF4^ENSG00000256061.7 | chr15:55467161:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1215:39306:8889 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:34916228-chr15:55467161 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| APIP--DEPDC7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | APIP^ENSG00000149089.13 | chr11:34916228:- | DEPDC7^ENSG00000121690.11 | chr11:33025659:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:9317:17002 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr11:1.82Mb]""]" | chr11:34916228-chr11:33025659 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| APIP--CAT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | APIP^ENSG00000149089.13 | chr11:34916228:- | CAT^ENSG00000121691.7 | chr11:34449192:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1472:43505:19496 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr11:0.38Mb]""]" | chr11:34916228-chr11:34449192 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP4B1--DNTTIP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP4B1^ENSG00000134262.13 | chr1:113904605:- | DNTTIP2^ENSG00000067334.14 | chr1:93873214:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2325:43917:11719 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:20.01Mb]""]" | chr1:113904605-chr1:93873214 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP006621.1--AC112504.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP006621.1^ENSG00000255108.1 | chr11:824521:- | AC112504.1^ENSG00000279147.1 | chr3:141937814:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1175:30035:27357 | . | NO_LDAS | 0.0034 | GC | 1.7465 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:824521-chr3:141937814 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AP003778.1--MEIS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP003778.1^ENSG00000287264.1 | chr11:59545975:+ | MEIS2^ENSG00000134138.20 | chr15:36950400:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:16031:18627 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:59545975-chr15:36950400 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP003108.2--PPP1R32 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP003108.2^ENSG00000256591.5 | chr11:61438113:+ | PPP1R32^ENSG00000162148.11 | chr11:61484688:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1323:32244:1841 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[12404]""]" | chr11:61438113-chr11:61484688 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AP003108.2--PPP1R32 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP003108.2^ENSG00000256591.5 | chr11:61438113:+ | PPP1R32^ENSG00000162148.11 | chr11:61481782:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1128:9681:24471 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[12404]""]" | chr11:61438113-chr11:61481782 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AP002985.1--USP35 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP002985.1^ENSG00000288538.1 | chr11:78224729:+ | USP35^ENSG00000118369.13 | chr11:78213646:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1101:32397:7964 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.2729 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8583]""]" | chr11:78224729-chr11:78213646 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP002812.5--GNB5 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AP002812.5^ENSG00000255449.1 | chr11:77869695:- | GNB5^ENSG00000069966.19 | chr15:52117054:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1382:15635:17941 | . | NO_LDAS | 0.0011 | GT | 1.5329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:77869695-chr15:52117054 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AP001977.1--PACSIN3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP001977.1^ENSG00000286044.1 | chr11:121928207:+ | PACSIN3^ENSG00000165912.16 | chr11:47182764:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1475:31960:10514 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.4716 | "[""INTRACHROMOSOMAL[chr11:74.49Mb]""]" | chr11:121928207-chr11:47182764 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001924.1--ZNF407 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP001924.1^ENSG00000286023.1 | chr11:121979703:- | ZNF407^ENSG00000215421.9 | chr18:74781428:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1235:23879:4699 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr11--chr18]""]" | chr11:121979703-chr18:74781428 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001924.1--UVRAG | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP001924.1^ENSG00000286023.1 | chr11:121979703:- | UVRAG^ENSG00000198382.9 | chr11:76065710:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:15926:23630 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr11:45.84Mb]""]" | chr11:121979703-chr11:76065710 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001924.1--GKAP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP001924.1^ENSG00000286023.1 | chr11:122025864:- | GKAP1^ENSG00000165113.13 | chr9:83753359:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:30011:21206 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr11--chr9]""]" | chr11:122025864-chr9:83753359 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001453.2--MIS12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP001453.2^ENSG00000257086.1 | chr11:64248050:- | MIS12^ENSG00000167842.16 | chr17:5488823:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2346:30189:27848 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr11--chr17]""]" | chr11:64248050-chr17:5488823 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001453.1--BAD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP001453.1^ENSG00000256116.1 | chr11:64234194:- | BAD^ENSG00000002330.14 | chr11:64271803:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:1251:13569 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.371 | "[""INTRACHROMOSOMAL[chr11:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[35478]""]" | chr11:64234194-chr11:64271803 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001122.1--AC097500.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP001122.1^ENSG00000245008.4 | chr11:128651857:- | AC097500.1^ENSG00000287129.1 | chr2:185952902:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:8694:15503 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr11--chr2]""]" | chr11:128651857-chr2:185952902 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001029.2--PRELID3A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP001029.2^ENSG00000267199.1 | chr18:12447619:+ | PRELID3A^ENSG00000141391.14 | chr18:12421540:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2459:6906:6521 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9329 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr18:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[6652]""]" | chr18:12447619-chr18:12421540 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 1 | ||||||
| AP000487.1--IMMP2L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP000487.1^ENSG00000246889.2 | chr11:70398098:- | IMMP2L^ENSG00000184903.10 | chr7:111561923:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1101:15772:24429 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr7]""]" | chr11:70398098-chr7:111561923 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AOPEP--CYP27A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AOPEP^ENSG00000148120.17 | chr9:95005616:+ | CYP27A1^ENSG00000135929.9 | chr2:218809577:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:44735:2962 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr9--chr2]""]" | chr9:95005616-chr2:218809577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANXA6--FAM210B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANXA6^ENSG00000197043.14 | chr5:151117764:- | FAM210B^ENSG00000124098.10 | chr20:56358976:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1232:10562:16610 | . | YES_LDAS | 0.0034 | GC | 1.6895 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr5--chr20]""]" | chr5:151117764-chr20:56358976 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANKS3--ZNF500 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANKS3^ENSG00000168096.15 | chr16:4729980:- | ZNF500^ENSG00000103199.14 | chr16:4762756:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:26144:3298 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9329 | "[""TumorFusionsNAR2018"",""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[13861]""]" | chr16:4729980-chr16:4762756 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANKRD42--CCDC90B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANKRD42^ENSG00000137494.14 | chr11:83211430:+ | CCDC90B^ENSG00000137500.9 | chr11:83278829:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2458:36378:23097 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr11:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[1597]""]" | chr11:83211430-chr11:83278829 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANKRD13C--FAM106A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANKRD13C^ENSG00000118454.13 | chr1:70336058:- | FAM106A^ENSG00000273018.7 | chr17:18524921:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:31216:28786 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:70336058-chr17:18524921 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ANKDD1B--POLK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANKDD1B^ENSG00000189045.15 | chr5:75625955:+ | POLK^ENSG00000122008.15 | chr5:75593878:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:51927:13233 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr5:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[10038]""]" | chr5:75625955-chr5:75593878 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANKDD1A--PLEKHO2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANKDD1A^ENSG00000166839.17 | chr15:64934234:+ | PLEKHO2^ENSG00000241839.10 | chr15:64826338:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:6331:21864 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr15:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[43900]""]" | chr15:64934234-chr15:64826338 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ANKDD1A--LRP4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANKDD1A^ENSG00000166839.17 | chr15:64943582:+ | LRP4^ENSG00000134569.10 | chr11:46889536:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:6032:6773 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr15--chr11]""]" | chr15:64943582-chr11:46889536 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ANKAR--ASNSD1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANKAR^ENSG00000151687.14 | chr2:189738682:+ | ASNSD1^ENSG00000138381.10 | chr2:189667169:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2192:13855:25283 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3459]""]" | chr2:189738682-chr2:189667169 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AMOT--EDC3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AMOT^ENSG00000126016.16 | chrX:112805080:- | EDC3^ENSG00000179151.13 | chr15:74630897:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2184:17714:14452 | . | NO_LDAS | 0.0034 | GC | 1.5546 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chrX--chr15]""]" | chrX:112805080-chr15:74630897 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AMMECR1--TMEM164 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AMMECR1^ENSG00000101935.11 | chrX:110264489:- | TMEM164^ENSG00000157600.12 | chrX:110171420:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1363:26831:22004 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:0.01Mb]"",""LOCAL_INVERSION:-:+:[11452]""]" | chrX:110264489-chrX:110171420 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AMDHD2--NECAB3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AMDHD2^ENSG00000162066.16 | chr16:2521123:+ | NECAB3^ENSG00000125967.17 | chr20:33660395:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:38538:16385 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr16--chr20]""]" | chr16:2521123-chr20:33660395 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ALPK1--HIBCH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ALPK1^ENSG00000073331.18 | chr4:112441105:+ | HIBCH^ENSG00000198130.16 | chr2:190204802:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2414:10926:13961 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:112441105-chr2:190204802 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ALOX5--CFLAR-AS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ALOX5^ENSG00000012779.11 | chr10:45428764:+ | CFLAR-AS1^ENSG00000226312.7 | chr2:201151259:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:41215:28955 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:45428764-chr2:201151259 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ALG6--AL162511.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ALG6^ENSG00000088035.18 | chr1:63414146:+ | AL162511.1^ENSG00000258844.2 | chr14:36214300:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:29776:22957 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 0.6998 | "[""INTERCHROMOSOMAL[chr1--chr14]""]" | chr1:63414146-chr14:36214300 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ALG3--GOLGA8M | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ALG3^ENSG00000214160.10 | chr3:184244601:- | GOLGA8M^ENSG00000188626.6 | chr15:28703917:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:3734:24204 | . | YES_LDAS | 0.0017 | GT | 1.8256 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr15]""]" | chr3:184244601-chr15:28703917 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ALDH9A1--RO60 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ALDH9A1^ENSG00000143149.12 | chr1:165695252:- | RO60^ENSG00000116747.13 | chr1:193075820:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:50915:28997 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr1:27.36Mb]""]" | chr1:165695252-chr1:193075820 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ALDH2--ANK2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ALDH2^ENSG00000111275.13 | chr12:111782022:+ | ANK2^ENSG00000145362.20 | chr4:113258267:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1254:2756:14130 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:111782022-chr4:113258267 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL596202.1--SDE2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL596202.1^ENSG00000235381.1 | chr6:155254285:- | SDE2^ENSG00000143751.10 | chr1:225991254:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:23523:2065 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:155254285-chr1:225991254 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL590714.1--SNHG9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL590714.1^ENSG00000224985.1 | chr1:161153898:- | SNHG9^ENSG00000255198.4 | chr16:1965406:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:43699:27960 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:161153898-chr16:1965406 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL590666.4--RRNAD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL590666.4^ENSG00000285570.1 | chr1:156689824:+ | RRNAD1^ENSG00000143303.12 | chr1:156731991:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1393:42081:7754 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:0.02Mb]"",""NEIGHBORS[23685]""]" | chr1:156689824-chr1:156731991 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AL590635.1--RABGAP1L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL590635.1^ENSG00000219867.1 | chr6:91816008:- | RABGAP1L^ENSG00000152061.23 | chr1:174250475:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1369:21015:29669 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:91816008-chr1:174250475 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL450322.2--WDR62 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL450322.2^ENSG00000229672.3 | chr10:3763430:+ | WDR62^ENSG00000075702.19 | chr19:36103003:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:23579:14578 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr10--chr19]""]" | chr10:3763430-chr19:36103003 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL391058.1--AC117481.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL391058.1^ENSG00000232499.2 | chr1:113449897:+ | AC117481.1^ENSG00000287398.1 | chr3:75214533:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:34970:1154 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:113449897-chr3:75214533 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL359715.1--BCKDHB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL359715.1^ENSG00000233967.7 | chr6:80454227:+ | BCKDHB^ENSG00000083123.15 | chr6:80343664:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2195:9867:18319 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr6:0.10Mb]"",""LOCAL_REARRANGEMENT:+:[95025]""]" | chr6:80454227-chr6:80343664 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL358113.1--ZNF702P | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL358113.1^ENSG00000285130.2 | chr9:69100061:+ | ZNF702P^ENSG00000242779.7 | chr19:52970842:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:15489:8917 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr9--chr19]""]" | chr9:69100061-chr19:52970842 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL356534.1--RBM6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL356534.1^ENSG00000286215.1 | chr6:126819392:- | RBM6^ENSG00000004534.15 | chr3:50048245:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2433:40681:19370 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr3]""]" | chr6:126819392-chr3:50048245 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL356157.3--SLC35A5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL356157.3^ENSG00000287173.1 | chr10:44510360:+ | SLC35A5^ENSG00000138459.9 | chr3:112573889:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1308:44023:10781 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:44510360-chr3:112573889 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL355379.1--JKAMP | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AL355379.1^ENSG00000217786.1 | chr6:79326596:- | JKAMP^ENSG00000050130.18 | chr14:59486731:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:33902:2611 | . | YES_LDAS | 0.0011 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr14]""]" | chr6:79326596-chr14:59486731 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL354919.1--TRIM32 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL354919.1^ENSG00000203620.2 | chr1:31842939:- | TRIM32^ENSG00000119401.11 | chr9:116698533:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:46223:8286 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:31842939-chr9:116698533 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL353796.1--OTUD7B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL353796.1^ENSG00000259994.1 | chr10:30305298:- | OTUD7B^ENSG00000264522.6 | chr1:149944663:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:12286:27777 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:30305298-chr1:149944663 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL353576.1--PTER | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL353576.1^ENSG00000287925.1 | chr10:16527751:+ | PTER^ENSG00000165983.15 | chr10:16505020:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2141:32899:21780 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[7969]""]" | chr10:16527751-chr10:16505020 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL160286.2--ARID4A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL160286.2^ENSG00000261060.1 | chr1:179590936:+ | ARID4A^ENSG00000032219.19 | chr14:58365518:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:11250:14914 | . | NO_LDAS | 0.0034 | GT | 0.9183 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr14]""]" | chr1:179590936-chr14:58365518 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL139353.1--ZNF675 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL139353.1^ENSG00000203546.7 | chr14:31453275:- | ZNF675^ENSG00000197372.10 | chr19:23534298:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:25205:20925 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr19]""]" | chr14:31453275-chr19:23534298 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| AL139353.1--LINC00621 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL139353.1^ENSG00000203546.7 | chr14:31453275:- | LINC00621^ENSG00000262619.2 | chr13:22859868:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1438:8216:16526 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr13]""]" | chr14:31453275-chr13:22859868 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL138778.1--AL136456.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL138778.1^ENSG00000286285.1 | chr1:193457750:+ | AL136456.1^ENSG00000227240.2 | chr1:193673210:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1208:42065:25774 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[8026]""]" | chr1:193457750-chr1:193673210 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AL121894.3--C9orf116 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AL121894.3^ENSG00000286117.2 | chr20:23666906:+ | C9orf116^ENSG00000160345.13 | chr9:135498656:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2432:35285:17086 | . | NO_LDAS | 0.0017 | GT | 1.5301 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr20--chr9]""]" | chr20:23666906-chr9:135498656 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL049828.1--AKR1C1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AL049828.1^ENSG00000258526.7 | chr14:39470400:+ | AKR1C1^ENSG00000187134.14 | chr10:4967033:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:16112:9632 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr14--chr10]""]" | chr14:39470400-chr10:4967033 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL049780.1--MLH3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL049780.1^ENSG00000258646.1 | chr14:75004735:- | MLH3^ENSG00000119684.16 | chr14:75049718:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:22924:8370 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8892 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5288]""]" | chr14:75004735-chr14:75049718 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL035446.2--TMA16 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL035446.2^ENSG00000285875.1 | chr6:140898188:- | TMA16^ENSG00000198498.10 | chr4:163507033:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1423:4689:19945 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr6--chr4]""]" | chr6:140898188-chr4:163507033 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL024497.2--TARID | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL024497.2^ENSG00000234567.1 | chr6:133456534:- | TARID^ENSG00000227954.7 | chr6:133538192:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:10376:12112 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr6:0.05Mb]"",""LOCAL_REARRANGEMENT:-:[45647]""]" | chr6:133456534-chr6:133538192 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL022324.1--AP000346.2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AL022324.1^ENSG00000230637.2 | chr22:25327738:+ | AP000346.2^ENSG00000234353.2 | chr22:23638942:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2385:50592:5624 | . | YES_LDAS | 0.0017 | GT | 1.7465 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr22:1.69Mb]""]" | chr22:25327738-chr22:23638942 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL021707.2--MRPS35 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL021707.2^ENSG00000228274.4 | chr22:38674891:- | MRPS35^ENSG00000061794.13 | chr12:27735447:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1253:43877:12014 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr22--chr12]""]" | chr22:38674891-chr12:27735447 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL008725.1--PRELID2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL008725.1^ENSG00000286100.1 | chr20:44864458:- | PRELID2^ENSG00000186314.11 | chr5:145796547:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1382:16436:22439 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr20--chr5]""]" | chr20:44864458-chr5:145796547 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AKAP10--ALG14 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AKAP10^ENSG00000108599.15 | chr17:19909234:- | ALG14^ENSG00000172339.10 | chr1:95064872:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1240:38384:11944 | . | NO_LDAS | 0.0017 | GT | 1.7968 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:19909234-chr1:95064872 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AGTPBP1--INTS13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AGTPBP1^ENSG00000135049.16 | chr9:85596362:- | INTS13^ENSG00000064102.15 | chr12:26914578:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2160:22074:11159 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr9--chr12]""]" | chr9:85596362-chr12:26914578 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AF121898.1--FAAH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AF121898.1^ENSG00000253500.6 | chr8:87636601:- | FAAH^ENSG00000117480.16 | chr1:46402091:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2477:20351:7249 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chr1]""]" | chr8:87636601-chr1:46402091 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AF064860.1--PCP4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AF064860.1^ENSG00000225330.1 | chr21:39630490:+ | PCP4^ENSG00000183036.11 | chr21:39928984:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:48658:26657 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr21:0.14Mb]""]" | chr21:39630490-chr21:39928984 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AF064860.1--IGSF5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AF064860.1^ENSG00000225330.1 | chr21:39630490:+ | IGSF5^ENSG00000183067.5 | chr21:39765535:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:20934:20393 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr21:0.02Mb]"",""NEIGHBORS[19322]""]" | chr21:39630490-chr21:39765535 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ADSS2--AC007906.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ADSS2^ENSG00000035687.10 | chr1:244418838:- | AC007906.2^ENSG00000277639.2 | chr16:53044186:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:36750:29431 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:244418838-chr16:53044186 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ADO--AL356776.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ADO^ENSG00000181915.5 | chr10:62805852:+ | AL356776.2^ENSG00000286340.1 | chr6:79078004:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:34112:16624 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr10--chr6]""]" | chr10:62805852-chr6:79078004 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ADGRE2--MRPL37 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ADGRE2^ENSG00000127507.18 | chr19:14746232:- | MRPL37^ENSG00000116221.15 | chr1:54205018:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2343:42947:7796 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:14746232-chr1:54205018 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ADD3--PLEKHO2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ADD3^ENSG00000148700.15 | chr10:110122212:+ | PLEKHO2^ENSG00000241839.10 | chr15:64848593:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2125:37494:2387 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:110122212-chr15:64848593 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACYP2--C4orf50 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACYP2^ENSG00000170634.13 | chr2:54138752:+ | C4orf50^ENSG00000181215.15 | chr4:6018161:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2251:33684:14452 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:54138752-chr4:6018161 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ACYP1--MLH3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACYP1^ENSG00000119640.9 | chr14:75069210:- | MLH3^ENSG00000119684.16 | chr14:75049718:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2271:1032:19244 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[1705]""]" | chr14:75069210-chr14:75049718 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ACVR1B--UHRF2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACVR1B^ENSG00000135503.13 | chr12:51976575:+ | UHRF2^ENSG00000147854.17 | chr9:6460710:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1288:2092:6143 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr12--chr9]""]" | chr12:51976575-chr9:6460710 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACTR8--SACM1L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACTR8^ENSG00000113812.14 | chr3:53868674:- | SACM1L^ENSG00000211456.13 | chr3:45703438:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1104:3136:1056 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr3:8.12Mb]""]" | chr3:53868674-chr3:45703438 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACTBP7--ACTG1P3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACTBP7^ENSG00000185607.5 | chr15:43989463:- | ACTG1P3^ENSG00000215388.3 | chr20:1161168:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1182:41086:19426 | . | YES_LDAS | 0.0034 | GC | 1.8892 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr15--chr20]""]" | chr15:43989463-chr20:1161168 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACSL1--ZBTB34 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACSL1^ENSG00000151726.15 | chr4:184773663:- | ZBTB34^ENSG00000177125.5 | chr9:126881764:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:39258:8441 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr4--chr9]""]" | chr4:184773663-chr9:126881764 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ACP7--GEMIN7-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACP7^ENSG00000183760.11 | chr19:39084400:+ | GEMIN7-AS1^ENSG00000267348.3 | chr19:45091000:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:8071:4391 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr19:5.97Mb]""]" | chr19:39084400-chr19:45091000 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ACP6--TBC1D15 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACP6^ENSG00000162836.12 | chr1:147648246:- | TBC1D15^ENSG00000121749.16 | chr12:71880469:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2403:16776:29501 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:147648246-chr12:71880469 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACOT9--POLA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACOT9^ENSG00000123130.17 | chrX:23721881:- | POLA1^ENSG00000101868.13 | chrX:24699425:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:6347:12504 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:0.93Mb]""]" | chrX:23721881-chrX:24699425 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACOT9--APOO | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACOT9^ENSG00000123130.17 | chrX:23743125:- | APOO^ENSG00000184831.14 | chrX:23880952:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2481:36677:4867 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9899 | "[""Klijn_CellLines"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chrX:0.07Mb]"",""LOCAL_REARRANGEMENT:-:[66878]""]" | chrX:23743125-chrX:23880952 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACOT9--AL354714.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ACOT9^ENSG00000123130.17 | chrX:23743125:- | AL354714.2^ENSG00000213080.3 | chr1:160895029:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2423:40649:14718 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr1]""]" | chrX:23743125-chr1:160895029 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ACER3--FCHSD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACER3^ENSG00000078124.13 | chr11:76926667:+ | FCHSD2^ENSG00000137478.15 | chr11:72989097:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:45479:2878 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""DEEPEST2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr11:3.72Mb]""]" | chr11:76926667-chr11:72989097 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACER3--ALG8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACER3^ENSG00000078124.13 | chr11:76959031:+ | ALG8^ENSG00000159063.14 | chr11:78121174:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1222:38942:15293 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr11:1.07Mb]""]" | chr11:76959031-chr11:78121174 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACAT1--AC024451.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACAT1^ENSG00000075239.14 | chr11:108140215:+ | AC024451.4^ENSG00000269924.1 | chr8:47527638:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:33942:6717 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:108140215-chr8:47527638 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ACADM--SSX2IP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACADM^ENSG00000117054.15 | chr1:75761370:+ | SSX2IP^ENSG00000117155.17 | chr1:84647607:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1173:12989:22046 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:8.86Mb]""]" | chr1:75761370-chr1:84647607 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACADM--OSBPL3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACADM^ENSG00000117054.15 | chr1:75740110:+ | OSBPL3^ENSG00000070882.13 | chr7:24800279:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:49216:26530 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:75740110-chr7:24800279 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACAD11--INSL6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACAD11^ENSG00000240303.8 | chr3:132618634:- | INSL6^ENSG00000120210.8 | chr9:5133592:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:33384:22845 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr3--chr9]""]" | chr3:132618634-chr9:5133592 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACAD11--AL513493.1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ACAD11^ENSG00000240303.8 | chr3:132618634:- | AL513493.1^ENSG00000285079.1 | chr1:65710813:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:16646:4251 | . | YES_LDAS | 0.0017 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:132618634-chr1:65710813 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC242842.2--NBPF11 | 1 | 0 | 0.08 | 0.0 | ONLY_REF_SPLICE | AC242842.2^ENSG00000284964.1 | chr1:149607554:+ | NBPF11^ENSG00000263956.6 | chr1:148143686:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1368:32252:27609 | . | YES_LDAS | 0.0003 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:1.46Mb]""]" | chr1:149607554-chr1:148143686 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC242842.2--IMMP2L | 1 | 0 | 0.2 | 0.0 | ONLY_REF_SPLICE | AC242842.2^ENSG00000284964.1 | chr1:149607554:+ | IMMP2L^ENSG00000184903.10 | chr7:111561923:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1222:14494:29053 | . | NO_LDAS | 0.0007 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:149607554-chr7:111561923 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC242842.2--AC073046.1 | 1 | 0 | 0.17 | 0.0 | ONLY_REF_SPLICE | AC242842.2^ENSG00000284964.1 | chr1:149607554:+ | AC073046.1^ENSG00000235499.1 | chr2:73985980:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2461:45398:4755 | . | YES_LDAS | 0.0006 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:149607554-chr2:73985980 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC242842.1--MAP3K1 | 1 | 0 | 0.2 | 0.0 | ONLY_REF_SPLICE | AC242842.1^ENSG00000275557.1 | chr1:149608516:+ | MAP3K1^ENSG00000095015.6 | chr5:56856600:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:13774:22733 | . | YES_LDAS | 0.0007 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:149608516-chr5:56856600 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC242842.1--LINC00623 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC242842.1^ENSG00000275557.1 | chr1:149608516:+ | LINC00623^ENSG00000226067.7 | chr1:120952439:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1127:25877:22537 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr1:28.60Mb]""]" | chr1:149608516-chr1:120952439 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC140076.1--AC005094.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AC140076.1^ENSG00000227309.1 | chr3:17465389:+ | AC005094.1^ENSG00000229949.1 | chr7:21401030:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2120:51797:20743 | . | NO_LDAS | 0.0011 | GT | 1.8256 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr7]""]" | chr3:17465389-chr7:21401030 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC138866.1--PGBD2 | 1 | 0 | 0.2 | 0.0 | ONLY_REF_SPLICE | AC138866.1^ENSG00000254701.3 | chr5:70197255:- | PGBD2^ENSG00000185220.12 | chr1:248917279:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1342:15473:25143 | . | YES_LDAS | 0.0007 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:70197255-chr1:248917279 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC138393.1--AC015802.6 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AC138393.1^ENSG00000229930.1 | chr1:224030704:- | AC015802.6^ENSG00000284526.1 | chr17:76564707:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1160:32300:8469 | . | NO_LDAS | 0.0011 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:224030704-chr17:76564707 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| AC138207.8--RNF135 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC138207.8^ENSG00000266865.6 | chr17:31024426:+ | RNF135^ENSG00000181481.14 | chr17:30984617:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2340:38546:25844 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8586]""]" | chr17:31024426-chr17:30984617 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC138207.2--BEX2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC138207.2^ENSG00000264107.1 | chr17:31095204:- | BEX2^ENSG00000133134.12 | chrX:103309734:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:14915:27287 | . | YES_LDAS | 0.0034 | GT | 1.2729 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr17--chrX]""]" | chr17:31095204-chrX:103309734 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC137723.1--YRDC | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC137723.1^ENSG00000279372.1 | chr17:82035724:- | YRDC^ENSG00000196449.4 | chr1:37804441:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1498:43481:6086 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:82035724-chr1:37804441 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC134878.2--PSMD14 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | AC134878.2^ENSG00000278212.2 | chrY:11212744:- | PSMD14^ENSG00000115233.12 | chr2:161367478:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:21152:12616 | . | YES_LDAS | 0.0011 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrY--chr2]""]" | chrY:11212744-chr2:161367478 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC134407.3--ZNF800 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC134407.3^ENSG00000279880.1 | chr17:67975958:+ | ZNF800^ENSG00000048405.10 | chr7:127373479:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1120:32891:21206 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr7]""]" | chr17:67975958-chr7:127373479 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC120057.3--NBPF19 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC120057.3^ENSG00000279641.1 | chr17:7243696:+ | NBPF19^ENSG00000271383.7 | chr1:149501602:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2135:44710:24975 | . | YES_LDAS | 0.0034 | GT | 1.231 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:7243696-chr1:149501602 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC117481.1--AL391058.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC117481.1^ENSG00000287398.1 | chr3:75214555:+ | AL391058.1^ENSG00000232499.2 | chr1:113450190:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:46692:14872 | . | YES_LDAS | 0.0017 | GT | 1.9086 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:75214555-chr1:113450190 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC115284.4--IQCF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC115284.4^ENSG00000287707.1 | chr3:51929275:- | IQCF1^ENSG00000173389.16 | chr3:51903089:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1450:21864:5358 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[23718]""]" | chr3:51929275-chr3:51903089 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC114781.2--COQ2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC114781.2^ENSG00000250057.1 | chr4:83238522:- | COQ2^ENSG00000173085.15 | chr4:83279114:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1333:37122:16904 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr4:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[14323]""]" | chr4:83238522-chr4:83279114 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC114489.1--SYNC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC114489.1^ENSG00000224409.1 | chr1:32725078:- | SYNC^ENSG00000162520.15 | chr1:32696044:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2445:45932:26334 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.4716 | "[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[14138]""]" | chr1:32725078-chr1:32696044 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC105052.5--AC004980.4 | 1 | 0 | 0.03 | 0.0 | INCL_NON_REF_SPLICE | AC105052.5^ENSG00000286830.1 | chr7:102703315:- | AC004980.4^ENSG00000250778.1 | chr7:76521938:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2362:1744:7754 | . | NO_LDAS | 0.0001 | GT | 1.8295 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:26.18Mb]""]" | chr7:102703315-chr7:76521938 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC104462.1--SMYD3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC104462.1^ENSG00000231612.1 | chr1:245673692:- | SMYD3^ENSG00000185420.19 | chr1:245749664:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2456:15797:14802 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr1:0.07Mb]"",""LOCAL_REARRANGEMENT:-:[72864]""]" | chr1:245673692-chr1:245749664 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC104383.1--GALNT18 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC104383.1^ENSG00000286959.1 | chr11:11810773:- | GALNT18^ENSG00000110328.6 | chr11:11448936:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2442:12067:25550 | . | YES_LDAS | 0.0034 | GC | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr11:0.16Mb]""]" | chr11:11810773-chr11:11448936 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC104117.3--ZNF454 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC104117.3^ENSG00000254035.1 | chr5:178969693:+ | ZNF454^ENSG00000178187.8 | chr5:178942685:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1455:8564:9533 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2957]""]" | chr5:178969693-chr5:178942685 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC104078.1--KIF17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC104078.1^ENSG00000247193.3 | chr4:36248606:+ | KIF17^ENSG00000117245.13 | chr1:20717598:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1205:23393:7446 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:36248606-chr1:20717598 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC099489.1--KCNAB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC099489.1^ENSG00000188897.9 | chr16:11467152:- | KCNAB2^ENSG00000069424.15 | chr1:6085204:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1263:41822:18067 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr1]""]" | chr16:11467152-chr1:6085204 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC097533.1--AC025569.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC097533.1^ENSG00000237868.1 | chr4:122078217:- | AC025569.1^ENSG00000258168.6 | chr12:70538867:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1447:27940:25045 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:122078217-chr12:70538867 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC097493.3--LINC00882 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC097493.3^ENSG00000284648.1 | chr4:9532651:+ | LINC00882^ENSG00000242759.8 | chr3:106926285:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1444:25165:1799 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr4--chr3]""]" | chr4:9532651-chr3:106926285 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC093763.2--MAP3K7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC093763.2^ENSG00000251643.1 | chr4:187442867:- | MAP3K7^ENSG00000135341.18 | chr6:90536401:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1159:50899:13275 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:187442867-chr6:90536401 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC092902.2--AC134684.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC092902.2^ENSG00000272840.1 | chr3:125797887:+ | AC134684.3^ENSG00000284617.1 | chr8:7610991:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1342:28579:19819 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr8]""]" | chr3:125797887-chr8:7610991 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC092813.1--MSH4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC092813.1^ENSG00000225605.3 | chr1:75934486:+ | MSH4^ENSG00000057468.7 | chr1:75803731:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1244:25205:13527 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[13212]""]" | chr1:75934486-chr1:75803731 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC092567.1--ANKRD23 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC092567.1^ENSG00000226605.1 | chr2:62825932:- | ANKRD23^ENSG00000163126.15 | chr2:96839406:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:11582:25241 | . | NO_LDAS | 0.0034 | GT | 1.4716 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr2:33.97Mb]""]" | chr2:62825932-chr2:96839406 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC092279.1--SMIM20 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC092279.1^ENSG00000268362.6 | chr19:24050742:+ | SMIM20^ENSG00000250317.8 | chr4:25914293:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:3848:1336 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr19--chr4]""]" | chr19:24050742-chr4:25914293 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC092032.2--RBAK | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | AC092032.2^ENSG00000288620.1 | chr7:4985075:+ | RBAK^ENSG00000146587.18 | chr7:5048033:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1488:45730:6423 | . | YES_LDAS | 0.0008 | GT | 1.7819 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[56644]""]" | chr7:4985075-chr7:5048033 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC092032.2--PMS2CL | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | AC092032.2^ENSG00000288620.1 | chr7:4985075:+ | PMS2CL^ENSG00000187953.10 | chr7:6731897:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1488:45730:6423 | . | YES_LDAS | 0.0008 | GT | 1.7819 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:1.72Mb]""]" | chr7:4985075-chr7:6731897 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC091212.1--METTL23 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC091212.1^ENSG00000239462.1 | chr3:98904994:+ | METTL23^ENSG00000181038.14 | chr17:76732978:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1387:2489:4671 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:98904994-chr17:76732978 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC091117.2--C1orf112 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC091117.2^ENSG00000259418.1 | chr15:45042367:- | C1orf112^ENSG00000000460.17 | chr1:169827051:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:15077:5680 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:45042367-chr1:169827051 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AC091057.6--ARHGAP11B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC091057.6^ENSG00000285035.1 | chr15:30647714:+ | ARHGAP11B^ENSG00000285077.2 | chr15:30630703:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:9325:16568 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr15:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9246]""]" | chr15:30647714-chr15:30630703 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC091057.4--MIGA1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC091057.4^ENSG00000284783.1 | chr15:30750556:+ | MIGA1^ENSG00000180488.15 | chr1:77801331:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:18903:27497 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:30750556-chr1:77801331 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC091057.4--ARHGAP11B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC091057.4^ENSG00000284783.1 | chr15:30750556:+ | ARHGAP11B^ENSG00000285077.2 | chr15:30634409:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:45196:9842 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr15:0.12Mb]""]" | chr15:30750556-chr15:30634409 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC091057.4--ARHGAP11B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC091057.4^ENSG00000284783.1 | chr15:30750556:+ | ARHGAP11B^ENSG00000285077.2 | chr15:30633490:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1123:33336:16568 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr15:0.12Mb]""]" | chr15:30750556-chr15:30633490 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC087359.1--ATG2B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC087359.1^ENSG00000250869.2 | chr8:67133745:- | ATG2B^ENSG00000066739.12 | chr14:96309590:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2131:18256:2443 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr14]""]" | chr8:67133745-chr14:96309590 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC087280.2--MRPL17 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC087280.2^ENSG00000283415.2 | chr11:6924498:- | MRPL17^ENSG00000158042.9 | chr11:6682815:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1116:23692:9309 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9899 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr11:0.14Mb]""]" | chr11:6924498-chr11:6682815 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC083899.1--AC097527.1 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | AC083899.1^ENSG00000204745.4 | chr2:87132117:+ | AC097527.1^ENSG00000237666.2 | chr2:106475817:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2111:22301:12840 | . | YES_LDAS | 0.0008 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr2:19.27Mb]""]" | chr2:87132117-chr2:106475817 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC083899.1--AC097527.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC083899.1^ENSG00000204745.4 | chr2:87164658:+ | AC097527.1^ENSG00000237666.2 | chr2:106470935:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1329:1356:7390 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5219 | "[""INTRACHROMOSOMAL[chr2:19.27Mb]""]" | chr2:87164658-chr2:106470935 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC079841.2--POLQ | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC079841.2^ENSG00000287022.1 | chr3:121430389:- | POLQ^ENSG00000051341.14 | chr3:121449426:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:41685:3620 | . | YES_LDAS | 0.0034 | GT | 1.2419 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[229]""]" | chr3:121430389-chr3:121449426 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC079841.2--POLQ | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC079841.2^ENSG00000287022.1 | chr3:121430389:- | POLQ^ENSG00000051341.14 | chr3:121436275:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2354:37607:14101 | . | YES_LDAS | 0.0034 | GT | 1.2419 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[229]""]" | chr3:121430389-chr3:121436275 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC079841.2--POLQ | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC079841.2^ENSG00000287022.1 | chr3:121430389:- | POLQ^ENSG00000051341.14 | chr3:121487509:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:37664:6409 | . | YES_LDAS | 0.0034 | GT | 1.2419 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[229]""]" | chr3:121430389-chr3:121487509 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC079841.2--POLQ | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC079841.2^ENSG00000287022.1 | chr3:121430389:- | POLQ^ENSG00000051341.14 | chr3:121433036:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:22002:1392 | . | YES_LDAS | 0.0034 | GT | 1.2419 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[229]""]" | chr3:121430389-chr3:121433036 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC079142.1--VCX | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | AC079142.1^ENSG00000285679.2 | chrX:8228405:+ | VCX^ENSG00000182583.12 | chrX:7843498:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1241:30520:10318 | . | YES_LDAS | 0.0011 | GT | 1.7465 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chrX:0.08Mb]"",""LOCAL_REARRANGEMENT:+:[84300]""]" | chrX:8228405-chrX:7843498 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC078993.1--TFCP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC078993.1^ENSG00000238178.7 | chrX:16167597:- | TFCP2^ENSG00000135457.10 | chr12:51109222:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1463:47105:5498 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chrX--chr12]""]" | chrX:16167597-chr12:51109222 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC073655.2--CEP83 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC073655.2^ENSG00000258365.1 | chr12:94278008:- | CEP83^ENSG00000173588.15 | chr12:94400981:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1465:38157:1350 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5058 | "[""INTRACHROMOSOMAL[chr12:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[23605]""]" | chr12:94278008-chr12:94400981 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC073488.1--ADGRF3 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | AC073488.1^ENSG00000232111.2 | chrX:9404753:+ | ADGRF3^ENSG00000173567.15 | chr2:26313625:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2341:31079:18543 | . | NO_LDAS | 0.0006 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chrX--chr2]""]" | chrX:9404753-chr2:26313625 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC073316.1--CARD11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC073316.1^ENSG00000217455.8 | chr7:3158138:- | CARD11^ENSG00000198286.10 | chr7:2958631:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1224:28102:19552 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8323 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.10Mb]"",""NEIGHBORS[96367]""]" | chr7:3158138-chr7:2958631 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC068989.1--DDX60 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC068989.1^ENSG00000287188.1 | chr4:168194397:- | DDX60^ENSG00000137628.18 | chr4:168237795:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:5765:1182 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr4:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[21430]""]" | chr4:168194397-chr4:168237795 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC068989.1--DDX60 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC068989.1^ENSG00000287188.1 | chr4:168194397:- | DDX60^ENSG00000137628.18 | chr4:168225676:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2368:17398:4041 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr4:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[21430]""]" | chr4:168194397-chr4:168225676 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC068633.1--LSAMP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC068633.1^ENSG00000243276.6 | chr3:118077358:- | LSAMP^ENSG00000185565.12 | chr3:116485068:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2175:48949:24891 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr3:0.87Mb]""]" | chr3:118077358-chr3:116485068 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC068587.4--FAM86B1 | 1 | 0 | 0.11 | 0.0 | ONLY_REF_SPLICE | AC068587.4^ENSG00000283674.3 | chr8:12601158:- | FAM86B1^ENSG00000186523.14 | chr8:12189888:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:44662:11691 | . | YES_LDAS | 0.0004 | GT | 1.3996 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr8:0.29Mb]""]" | chr8:12601158-chr8:12189888 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC068189.1--CBWD6 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC068189.1^ENSG00000254248.1 | chr8:95078521:- | CBWD6^ENSG00000215126.10 | chr9:41156439:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1450:35051:22985 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr8--chr9]""]" | chr8:95078521-chr9:41156439 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC053527.2--ALB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC053527.2^ENSG00000250220.1 | chr4:73259408:+ | ALB^ENSG00000163631.17 | chr4:73404369:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2143:42672:4713 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr4:0.08Mb]"",""NEIGHBORS[79161]""]" | chr4:73259408-chr4:73404369 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC027176.1--TSPAN9 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC027176.1^ENSG00000259273.1 | chr15:89936539:+ | TSPAN9^ENSG00000011105.14 | chr12:3083653:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1385:15077:3186 | . | NO_LDAS | 0.0017 | GT | 1.2867 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr12]""]" | chr15:89936539-chr12:3083653 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC026150.2--GOLGA8H | 1 | 0 | 0.1 | 0.0 | INCL_NON_REF_SPLICE | AC026150.2^ENSG00000260784.1 | chr15:30517819:+ | GOLGA8H^ENSG00000261794.1 | chr15:30612597:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2107:44492:7614 | . | NO_LDAS | 0.0003 | GT | 1.7056 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr15:0.09Mb]"",""NEIGHBORS[86259]""]" | chr15:30517819-chr15:30612597 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC025437.1--PIAS3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC025437.1^ENSG00000253134.1 | chr5:158278743:+ | PIAS3^ENSG00000131788.16 | chr1:145853886:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2489:15069:27777 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:158278743-chr1:145853886 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC025178.1--GOLPH3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC025178.1^ENSG00000250764.1 | chr5:32121495:- | GOLPH3^ENSG00000113384.14 | chr5:32143880:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1265:26791:8539 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[2775]""]" | chr5:32121495-chr5:32143880 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AC025178.1--GOLPH3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC025178.1^ENSG00000250764.1 | chr5:32121495:- | GOLPH3^ENSG00000113384.14 | chr5:32135686:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:24154:2401 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[2775]""]" | chr5:32121495-chr5:32135686 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 1 | ||||||
| AC022400.4--TIMM23 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC022400.4^ENSG00000272140.2 | chr10:73713266:- | TIMM23^ENSG00000265354.4 | chr10:45975454:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1284:36321:22131 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr10:27.70Mb]""]" | chr10:73713266-chr10:45975454 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| AC022167.1--PMM2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC022167.1^ENSG00000259939.1 | chr16:8853636:+ | PMM2^ENSG00000140650.12 | chr16:8847724:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:14268:14564 | . | YES_LDAS | 0.0017 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3987]""]" | chr16:8853636-chr16:8847724 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC021851.1--NUP35 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC021851.1^ENSG00000272800.3 | chr2:183188763:+ | NUP35^ENSG00000163002.13 | chr2:183157444:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:11913:12056 | . | YES_LDAS | 0.0034 | GT | 0.9056 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]" | chr2:183188763-chr2:183157444 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC021851.1--NUP35 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC021851.1^ENSG00000272800.3 | chr2:183188763:+ | NUP35^ENSG00000163002.13 | chr2:183151508:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:31782:23826 | . | YES_LDAS | 0.0034 | GT | 0.9056 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]" | chr2:183188763-chr2:183151508 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC021087.3--SECISBP2L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC021087.3^ENSG00000260774.1 | chr5:215185:- | SECISBP2L^ENSG00000138593.9 | chr15:48999973:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:1922:19945 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:215185-chr15:48999973 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC016907.2--ALK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC016907.2^ENSG00000233862.7 | chr2:30119768:- | ALK^ENSG00000171094.18 | chr2:29717697:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2454:6137:2920 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9329 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.13Mb]""]" | chr2:30119768-chr2:29717697 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AC016831.1--SLC35F3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC016831.1^ENSG00000226380.9 | chr7:130912110:- | SLC35F3^ENSG00000183780.13 | chr1:234231417:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:41863:16371 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:130912110-chr1:234231417 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC016831.1--SEM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC016831.1^ENSG00000226380.9 | chr7:130912110:- | SEM1^ENSG00000127922.9 | chr7:96673859:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2126:1178:11089 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr7:34.17Mb]""]" | chr7:130912110-chr7:96673859 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC016831.1--EXOC4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC016831.1^ENSG00000226380.9 | chr7:130912110:- | EXOC4^ENSG00000131558.15 | chr7:133817325:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2404:19664:24415 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr7:2.34Mb]""]" | chr7:130912110-chr7:133817325 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC016821.1--TSPAN15 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC016821.1^ENSG00000287306.1 | chr10:69511870:+ | TSPAN15^ENSG00000099282.10 | chr10:69483691:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:25003:13961 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr10:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2500]""]" | chr10:69511870-chr10:69483691 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC016597.1--NPIPB10P | 1 | 0 | 0.06 | 0.0 | ONLY_REF_SPLICE | AC016597.1^ENSG00000261329.6 | chr16:27685266:- | NPIPB10P^ENSG00000196796.5 | chr16:29050502:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1308:25521:10963 | . | NO_LDAS | 0.0002 | GT | 1.9329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr16:1.32Mb]""]" | chr16:27685266-chr16:29050502 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC016526.2--ESRRB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC016526.2^ENSG00000258454.1 | chr14:76252108:+ | ESRRB^ENSG00000119715.15 | chr14:76439341:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2206:23968:29291 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""NEIGHBORS[47238]""]" | chr14:76252108-chr14:76439341 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC016526.2--ESRRB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC016526.2^ENSG00000258454.1 | chr14:76236003:+ | ESRRB^ENSG00000119715.15 | chr14:76439341:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:51668:15923 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""NEIGHBORS[47238]""]" | chr14:76236003-chr14:76439341 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC012615.1--SCAMP4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC012615.1^ENSG00000261526.2 | chr19:1875954:- | SCAMP4^ENSG00000227500.10 | chr19:1917694:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2270:9001:11383 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr19:0.03Mb]"",""LOCAL_INVERSION:-:+:[29203]""]" | chr19:1875954-chr19:1917694 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC011632.1--ELAPOR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC011632.1^ENSG00000253706.5 | chr8:74866865:- | ELAPOR2^ENSG00000164659.15 | chr7:86947922:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:43812:9547 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:74866865-chr7:86947922 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC010538.1--SPATA33 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC010538.1^ENSG00000275734.2 | chr16:89682496:+ | SPATA33^ENSG00000167523.14 | chr16:89669286:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:4729:17549 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[296]""]" | chr16:89682496-chr16:89669286 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC010401.1--CDIN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC010401.1^ENSG00000262732.1 | chr16:13934190:- | CDIN1^ENSG00000186073.14 | chr15:36579948:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2211:7585:11537 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr15]""]" | chr16:13934190-chr15:36579948 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC010335.1--NIP7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC010335.1^ENSG00000268199.2 | chr19:18443446:+ | NIP7^ENSG00000132603.15 | chr16:69341576:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1406:12706:6759 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr19--chr16]""]" | chr19:18443446-chr16:69341576 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC010327.4--GTF2H2C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC010327.4^ENSG00000267577.1 | chr19:55160003:+ | GTF2H2C^ENSG00000183474.16 | chr5:69566612:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1411:3014:5862 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:55160003-chr5:69566612 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC010255.2--SNCAIP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC010255.2^ENSG00000250803.6 | chr5:122129683:+ | SNCAIP^ENSG00000064692.20 | chr5:122391089:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1113:33514:14158 | . | YES_LDAS | 0.0034 | GT | 1.3753 | AG | 1.4295 | "[""INTRACHROMOSOMAL[chr5:0.13Mb]""]" | chr5:122129683-chr5:122391089 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC010198.2--YIPF5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC010198.2^ENSG00000285517.1 | chr12:30800021:+ | YIPF5^ENSG00000145817.17 | chr5:144165604:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1277:4527:15601 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr12--chr5]""]" | chr12:30800021-chr5:144165604 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC009292.2--PIAS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC009292.2^ENSG00000259410.5 | chr15:67873866:+ | PIAS1^ENSG00000033800.14 | chr15:68086306:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1271:16144:21430 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr15:0.18Mb]""]" | chr15:67873866-chr15:68086306 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC009093.8--AC009093.9 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | AC009093.8^ENSG00000284649.1 | chr16:29116326:+ | AC009093.9^ENSG00000284671.1 | chr16:29084443:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2346:33781:14200 | . | YES_LDAS | 0.0011 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8888]""]" | chr16:29116326-chr16:29084443 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AC008770.3--SEMA7A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC008770.3^ENSG00000267274.1 | chr19:11953408:+ | SEMA7A^ENSG00000138623.10 | chr15:74410764:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2137:32292:24737 | . | YES_LDAS | 0.0034 | AT | 1.9656 | AC | 1.9086 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:11953408-chr15:74410764 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC008764.7--VRK2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC008764.7^ENSG00000269578.1 | chr19:16586981:- | VRK2^ENSG00000028116.18 | chr2:58159349:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2103:4050:14017 | . | NO_LDAS | 0.0017 | GT | 1.7819 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:16586981-chr2:58159349 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC008667.2--PSD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC008667.2^ENSG00000250692.1 | chr5:139855786:+ | PSD2^ENSG00000146005.4 | chr5:139833702:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:29202:20785 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3824]""]" | chr5:139855786-chr5:139833702 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC008267.2--AC008267.5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC008267.2^ENSG00000230189.7 | chr7:66450071:- | AC008267.5^ENSG00000244510.2 | chr7:66481599:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1493:19461:14704 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr7:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[26760]""]" | chr7:66450071-chr7:66481599 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC006435.2--ODF2L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC006435.2^ENSG00000263345.1 | chr17:2377359:- | ODF2L^ENSG00000122417.15 | chr1:86387086:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:39492:1560 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:2377359-chr1:86387086 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC006001.3--FZD6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC006001.3^ENSG00000229180.7 | chr7:66554424:- | FZD6^ENSG00000164930.12 | chr8:103330022:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2282:39589:10921 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:66554424-chr8:103330022 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC005740.1--C16orf46 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC005740.1^ENSG00000226040.3 | chr5:141896266:- | C16orf46^ENSG00000166455.14 | chr16:81054094:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1351:13135:4083 | . | YES_LDAS | 0.0017 | GT | 1.8062 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr5--chr16]""]" | chr5:141896266-chr16:81054094 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC005726.2--DNAJC17 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC005726.2^ENSG00000264044.1 | chr17:28633967:+ | DNAJC17^ENSG00000104129.10 | chr15:40773762:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2220:17504:25353 | . | YES_LDAS | 0.0017 | GT | 1.5058 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr17--chr15]""]" | chr17:28633967-chr15:40773762 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC005410.2--ZNF18 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC005410.2^ENSG00000266368.1 | chr17:11977248:- | ZNF18^ENSG00000154957.14 | chr17:11978744:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1241:20554:13989 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""NEIGHBORS_OVERLAP:-:-:[155]""]" | chr17:11977248-chr17:11978744 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC005336.1--UBE2D1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC005336.1^ENSG00000267056.2 | chr19:15911549:- | UBE2D1^ENSG00000072401.15 | chr10:58361338:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1488:44654:14816 | . | YES_LDAS | 0.0017 | GT | 1.7056 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr19--chr10]""]" | chr19:15911549-chr10:58361338 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC004967.1--ARL8B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC004967.1^ENSG00000243554.1 | chr7:97972135:- | ARL8B^ENSG00000134108.14 | chr3:5172150:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1480:2391:4363 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr7--chr3]""]" | chr7:97972135-chr3:5172150 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC004923.1--ZBTB1 | 1 | 0 | 0.09 | 0.0 | ONLY_REF_SPLICE | AC004923.1^ENSG00000254610.3 | chr11:67955482:- | ZBTB1^ENSG00000126804.13 | chr14:64516600:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1395:22074:24106 | . | YES_LDAS | 0.0003 | GT | 1.4566 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr11--chr14]""]" | chr11:67955482-chr14:64516600 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC004846.2--NUMB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC004846.2^ENSG00000258944.1 | chr14:73273939:- | NUMB^ENSG00000133961.20 | chr14:73277293:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2287:20618:29375 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1026]""]" | chr14:73273939-chr14:73277293 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC004596.1--AC132217.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC004596.1^ENSG00000267394.1 | chr17:44198930:+ | AC132217.2^ENSG00000284779.2 | chr11:2135529:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1470:8807:13093 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:44198930-chr11:2135529 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC004083.1--TMEM64 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC004083.1^ENSG00000254180.2 | chr8:90618949:- | TMEM64^ENSG00000180694.14 | chr8:90631707:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2411:51498:21206 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr8:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1918]""]" | chr8:90618949-chr8:90631707 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC003991.1--IKZF5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC003991.1^ENSG00000228113.7 | chr7:88253160:+ | IKZF5^ENSG00000095574.12 | chr10:122996176:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1269:32616:6185 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:88253160-chr10:122996176 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC002116.2--CFAP44 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC002116.2^ENSG00000267698.1 | chr19:36019384:+ | CFAP44^ENSG00000206530.11 | chr3:113294038:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2408:29339:10767 | . | NO_LDAS | 0.0034 | GT | 1.585 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:36019384-chr3:113294038 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ABCC2--CUTC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABCC2^ENSG00000023839.12 | chr10:99782877:+ | CUTC^ENSG00000119929.13 | chr10:99747257:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2257:32454:27707 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr10:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[26506]""]" | chr10:99782877-chr10:99747257 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ABCB10--DENND1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABCB10^ENSG00000135776.5 | chr1:229518841:- | DENND1B^ENSG00000213047.13 | chr1:197583253:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2150:39905:3368 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:31.74Mb]""]" | chr1:229518841-chr1:197583253 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ABCA9-AS1--LAMP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABCA9-AS1^ENSG00000231749.3 | chr17:69022467:+ | LAMP3^ENSG00000078081.8 | chr3:183124214:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2417:22026:17436 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr17--chr3]""]" | chr17:69022467-chr3:183124214 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ABCA11P--PLEKHH2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABCA11P^ENSG00000251595.7 | chr4:472575:- | PLEKHH2^ENSG00000152527.14 | chr2:43745866:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:31936:18235 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:472575-chr2:43745866 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ABCA11P--CEP295 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ABCA11P^ENSG00000251595.7 | chr4:472575:- | CEP295^ENSG00000166004.15 | chr11:93721954:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2178:13451:29263 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr4--chr11]""]" | chr4:472575-chr11:93721954 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AACSP1--ZNF354A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AACSP1^ENSG00000250420.8 | chr5:178767130:- | ZNF354A^ENSG00000169131.13 | chr5:178749984:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:1663:13555 | . | NO_LDAS | 0.0034 | GC | 1.8256 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr5:0.03Mb]"",""NEIGHBORS[34202]""]" | chr5:178767130-chr5:178749984 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| A4GALT--C2orf76 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | A4GALT^ENSG00000128274.17 | chr22:42720797:- | C2orf76^ENSG00000186132.15 | chr2:119339971:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1139:14260:20911 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr2]""]" | chr22:42720797-chr2:119339971 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| YIPF6--STARD8 | 1 | 1 | 1.0 | 1.0 | ONLY_REF_SPLICE | YIPF6^ENSG00000181704.12 | chrX:68522917:+ | STARD8^ENSG00000130052.13 | chrX:68665499:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1310:28182:19833 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1365:31540:15279 | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chrX:0.11Mb]""]" | chrX:68522917-chrX:68665499 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| TTC33--PRKAA1 | 1 | 1 | 1.0 | 0.5 | ONLY_REF_SPLICE | TTC33^ENSG00000113638.14 | chr5:40746798:- | PRKAA1^ENSG00000132356.11 | chr5:40777586:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2297:20845:20183 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:20384:21654 | YES_LDAS | 0.0051 | GT | 1.6402 | AG | 1.8892 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[3416]""]" | chr5:40746798-chr5:40777586 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| TTC33--PRKAA1 | 1 | 1 | 1.0 | 0.5 | ONLY_REF_SPLICE | TTC33^ENSG00000113638.14 | chr5:40728345:- | PRKAA1^ENSG00000132356.11 | chr5:40771863:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2390:25270:14760 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:20384:21654 | NO_LDAS | 0.0051 | GT | 1.9086 | AG | 1.6402 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[3416]""]" | chr5:40728345-chr5:40771863 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| PKD1--NPIPA3 | 1 | 1 | 0.5 | 0.08 | INCL_NON_REF_SPLICE | PKD1^ENSG00000008710.20 | chr16:2097868:- | NPIPA3^ENSG00000224712.12 | chr16:14711620:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2423:12447:21696 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:40188:14228 | YES_LDAS | 0.002 | GT | 1.8323 | AG | 1.7465 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:12.57Mb]""]" | chr16:2097868-chr16:14711620 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 2 | ||||||
| CA13--CA3 | 1 | 1 | 1.0 | 0.17 | ONLY_REF_SPLICE | CA13^ENSG00000185015.8 | chr8:85268627:+ | CA3^ENSG00000164879.7 | chr8:85439712:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:6542:19931 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2138:16023:10150 | YES_LDAS | 0.004 | GT | 1.9086 | AG | 1.8892 | "[""DGD_PARALOGS"",""ConjoinG"",""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[89363]""]" | chr8:85268627-chr8:85439712 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| AC114763.1--NXPH2 | 1 | 1 | 1.0 | 0.17 | ONLY_REF_SPLICE | AC114763.1^ENSG00000228043.5 | chr2:138436473:- | NXPH2^ENSG00000144227.5 | chr2:138671665:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1454:20934:22018 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2221:32527:10682 | YES_LDAS | 0.004 | GT | 1.3996 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr2:0.17Mb]""]" | chr2:138436473-chr2:138671665 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| WDR27--AL135910.1 | 1 | 2 | 1.0 | 0.33 | INCL_NON_REF_SPLICE | WDR27^ENSG00000184465.16 | chr6:169582836:- | AL135910.1^ENSG00000272848.2 | chr6:169452439:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1260:12771:3228 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:20473:1378,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:48610:7011 | NO_LDAS | 0.0045 | GT | 1.6729 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS[4737]""]" | chr6:169582836-chr6:169452439 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| AC005993.1--RGS6 | 1 | 2 | 1.0 | 0.2 | ONLY_REF_SPLICE | AC005993.1^ENSG00000266869.2 | chr14:71908430:+ | RGS6^ENSG00000182732.18 | chr14:72352095:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:7423:14676 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:30310:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:13798:18740 | YES_LDAS | 0.0041 | GT | 1.8892 | AG | 1.8323 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]" | chr14:71908430-chr14:72352095 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| AC005993.1--RGS6 | 1 | 2 | 1.0 | 0.2 | INCL_NON_REF_SPLICE | AC005993.1^ENSG00000266869.2 | chr14:71869984:+ | RGS6^ENSG00000182732.18 | chr14:72292287:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2435:42712:15517 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:30310:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:13798:18740 | YES_LDAS | 0.0041 | GT | 1.8062 | AG | 1.9656 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]" | chr14:71869984-chr14:72292287 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 |
1797 rows