File Info
- Filename
- FFPE_V4_0001_RNA_0001_B23LG7FLT4_1.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008/B23LG7FLT4/nfcore_rnafusion_100M__1bb6229e--20260226-142939/fusioninspector/FFPE_V4_0001_RNA_0001_B23LG7FLT4_1.FusionInspector.fusions.abridged.tsv
- Size
- 4.2 KB
- Workflow Run
- dev_rna_exp0008_1bb6229e
- Published
- Feb 27, 2026 12:15 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 2256 | 6 | 2256.00 | 5.99 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 67 | 1687 | 33.28 | 1.34 | GT | 1.8892 | AG | 1.7819 | 22.9964 | 627 | 0 |
| FGFR3--TACC3 | 5 | 6 | 5.00 | 0.01 | FGFR3^ENSG00000068078.20 | 9880 | chr4:1806936:+ | TACC3^ENSG00000013810.20 | 27593 | chr4:1739705:+ | INCL_NON_REF_SPLICE | YES | 7 | 1719 | 1.50 | 0.01 | GA | 1.8892 | TA | 1.5219 | 0.0509 | 623 | 0 |
| TMPRSS2--ERG | 1424 | 0 | 1424.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 4 | 65 | 285.00 | 21.59 | GT | 1.6895 | AG | 1.9219 | 14.477 | 1104 | 0 |
| LMNA--NTRK1 | 704 | 12 | 704.00 | 11.96 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2351 | 243 | 0.30 | 2.94 | GT | 1.7465 | AG | 1.5058 | 7.2788 | 947 | 0 |
| LMNA--NTRK1 | 3 | 9 | 3.00 | 0.04 | LMNA^ENSG00000160789.23 | 17734 | chr1:156130774:+ | NTRK1^ENSG00000198400.13 | 40292 | chr1:156874909:+ | INCL_NON_REF_SPLICE | YES | 2351 | 271 | 0.01 | 0.05 | TG | 1.7465 | TC | 1.4566 | 0.0309 | 949 | 0 |
| FGFR3--BAIAP2L1 | 638 | 2 | 638.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 69 | 22 | 9.16 | 27.87 | GT | 1.8892 | AG | 1.8062 | 6.5065 | 1171 | 0 |
| ETV6--NTRK3 | 614 | 2 | 614.00 | 2.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1966 | 13 | 0.31 | 44.07 | GT | 1.7819 | AG | 1.9656 | 6.2625 | 1252 | 0 |
| TPM3--NTRK1 | 533 | 4 | 533.00 | 4.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 5275 | 27 | 0.10 | 19.21 | GT | 1.9329 | AG | 1.6895 | 5.4594 | 355 | 0 |
| KIF5B--RET | 517 | 6 | 517.00 | 6.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 979 | 13 | 0.53 | 37.43 | GT | 1.9656 | AG | 1.9656 | 5.3171 | 3178 | 0 |
| NCOA4--RET | 443 | 3 | 443.00 | 3.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1859 | 355 | 0.24 | 1.26 | GT | 1.9086 | AG | 1.8323 | 4.5342 | 5144 | 0 |
| CD74--ROS1 | 428 | 5 | 428.00 | 5.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 23747 | 38 | 0.02 | 11.13 | GT | 1.7819 | AG | 1.7465 | 4.402 | 2407 | 0 |
| CCDC6--RET | 406 | 2 | 406.00 | 2.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1306 | 355 | 0.31 | 1.15 | GT | 1.8892 | AG | 1.8323 | 4.1479 | 2092 | 0 |
| SLC34A2--ROS1 | 403 | 13 | 403.00 | 13.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 39 | 417.00 | 10.43 | GT | 1.8892 | AG | 1.7465 | 4.2293 | 999 | 0 |
| EML4--ALK | 314 | 0 | 314.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 425 | 32 | 0.74 | 9.55 | GT | 1.6895 | AG | 1.9086 | 3.1923 | 1550 | 0 |
| PAX8--PPARG | 258 | 1 | 258.00 | 1.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 70 | 6 | 3.66 | 37.14 | GT | 1.8295 | AG | 1.9329 | 2.6331 | 1923 | 0 |
| SLC45A3--BRAF | 210 | 0 | 210.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 1040 | 211.00 | 0.20 | GT | 1.5628 | AG | 1.7465 | 2.135 | 2599 | 0 |
| TFG--NTRK1 | 207 | 3 | 207.00 | 3.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 1339 | 27 | 0.16 | 7.54 | GT | 1.9329 | AG | 1.6895 | 2.135 | 883 | 0 |
| EGFR--SEPTIN14 | 197 | 0 | 197.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 6 | 3 | 28.29 | 49.50 | GT | 1.8892 | AG | 1.9899 | 2.0028 | 658 | 0 |
| RAB11FIP3--CYTH1 | 2 | 0 | 2.00 | 0.00 | RAB11FIP3^ENSG00000090565.17 | 7872 | chr16:489000:+ | CYTH1^ENSG00000108669.16 | 29214 | chr17:78709732:- | ONLY_REF_SPLICE | YES | 284 | 795 | 0.01 | 0.00 | GT | 1.7968 | AG | 1.9656 | 0.0203 | 2605 | 0 |
| MOSPD2--MAD1L1 | 1 | 0 | 1.00 | 0.00 | MOSPD2^ENSG00000130150.12 | 1338 | chrX:14873758:+ | MAD1L1^ENSG00000002822.16 | 56714 | chr7:1898390:- | ONLY_REF_SPLICE | YES | 57 | 767 | 0.03 | 0.00 | GT | 1.9329 | AG | 1.7056 | 0.0102 | 4114 | 0 |
21 rows